RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDC42SE1-205ENST00000491825 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
CDC42SE1-205ENST00000491825 PLIN4Q96Q06 1357 aa17.75■□□□□ 0.43
CDC42SE1-205ENST00000491825 DNAH12Q6ZR08 3092 aa17.75■□□□□ 0.43
CDC42SE1-205ENST00000491825 PLS1Q14651 629 aa17.74■□□□□ 0.43
CDC42SE1-205ENST00000491825 NCAPG2Q86XI2 1143 aa17.74■□□□□ 0.43
CDC42SE1-205ENST00000491825 PPP1R9AQ9ULJ8 1098 aa17.74■□□□□ 0.43
CDC42SE1-205ENST00000491825 PARP14Q460N5 1801 aa17.74■□□□□ 0.43
CDC42SE1-205ENST00000491825 DNM1LO00429 736 aa17.73■□□□□ 0.43
CDC42SE1-205ENST00000491825 ZNF213O14771 459 aa17.73■□□□□ 0.43
CDC42SE1-205ENST00000491825 ORC4O43929 436 aa17.73■□□□□ 0.43
CDC42SE1-205ENST00000491825 CNGA1P29973 690 aa17.73■□□□□ 0.43
CDC42SE1-205ENST00000491825 IMMTQ16891 758 aaKnown RBP17.73■□□□□ 0.43
CDC42SE1-205ENST00000491825 RIOX2Q8IUF8 465 aa17.73■□□□□ 0.43
CDC42SE1-205ENST00000491825 STAG1Q8WVM7 1258 aa17.73■□□□□ 0.43
CDC42SE1-205ENST00000491825 MAML3Q96JK9 1138 aa17.73■□□□□ 0.43
CDC42SE1-205ENST00000491825 GOPCQ9HD26 462 aa17.73■□□□□ 0.43
CDC42SE1-205ENST00000491825 ANO2Q9NQ90 1003 aa17.73■□□□□ 0.43
CDC42SE1-205ENST00000491825 ZNF214Q9UL59 606 aaPredicted RBP17.73■□□□□ 0.43
CDC42SE1-205ENST00000491825 IGKV6D-41A0A0C4DH26 115 aa17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 VWA5AO00534 786 aa17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 SEPT4O43236 478 aa17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 EPB41L2O43491 1005 aaKnown RBP17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 SLC25A27O95847 323 aa17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 CTDSPL2Q05D32 466 aa17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 FAM83BQ5T0W9 1011 aa17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 TBC1D10CQ8IV04 446 aa17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 SENP6Q9GZR1 1112 aaPredicted RBP17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 RNF41Q9H4P4 317 aaPredicted RBP17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 MKNK2Q9HBH9 465 aa17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 NYAP2Q9P242 653 aa17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 RBM8AQ9Y5S9 174 aaKnown RBP17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 COL6A3P12111 3177 aa17.72■□□□□ 0.43
CDC42SE1-205ENST00000491825 REC8O95072 547 aa17.71■□□□□ 0.43
CDC42SE1-205ENST00000491825 FCER1AP12319 257 aa17.71■□□□□ 0.43
CDC42SE1-205ENST00000491825 HAND2P61296 217 aa17.71■□□□□ 0.43
CDC42SE1-205ENST00000491825 LRIT3Q3SXY7 679 aa17.71■□□□□ 0.43
CDC42SE1-205ENST00000491825 AKNAD1Q5T1N1 836 aa17.71■□□□□ 0.43
CDC42SE1-205ENST00000491825 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
CDC42SE1-205ENST00000491825 TDHQ8IZJ6 230 aa17.71■□□□□ 0.43
CDC42SE1-205ENST00000491825 SLC5A4Q9NY91 659 aa17.71■□□□□ 0.43
CDC42SE1-205ENST00000491825 CYP21A2P08686 494 aa17.7■□□□□ 0.42
CDC42SE1-205ENST00000491825 STAT3P40763 770 aa17.7■□□□□ 0.42
CDC42SE1-205ENST00000491825 PRAMEF19Q5SWL8 479 aa17.7■□□□□ 0.42
CDC42SE1-205ENST00000491825 NUP88Q99567 741 aaPredicted RBP17.7■□□□□ 0.42
CDC42SE1-205ENST00000491825 TACC3Q9Y6A5 838 aa17.7■□□□□ 0.42
CDC42SE1-205ENST00000491825 EIF5BO60841 1220 aaKnown RBP17.69■□□□□ 0.42
CDC42SE1-205ENST00000491825 PRDM1O75626 825 aa17.69■□□□□ 0.42
CDC42SE1-205ENST00000491825 NDUFB10O96000 172 aa17.69■□□□□ 0.42
CDC42SE1-205ENST00000491825 ATN1P54259 1190 aaPredicted RBP17.69■□□□□ 0.42
CDC42SE1-205ENST00000491825 NECTIN1Q15223 517 aa17.69■□□□□ 0.42
CDC42SE1-205ENST00000491825 ZNF792Q3KQV3 632 aa17.69■□□□□ 0.42
CDC42SE1-205ENST00000491825 GJC2Q5T442 439 aaPredicted RBP17.69■□□□□ 0.42
CDC42SE1-205ENST00000491825 ANO1Q5XXA6 986 aa17.69■□□□□ 0.42
CDC42SE1-205ENST00000491825 GPR153Q6NV75 609 aa17.69■□□□□ 0.42
CDC42SE1-205ENST00000491825 MFSD6Q6ZSS7 791 aa17.69■□□□□ 0.42
CDC42SE1-205ENST00000491825 STK11IPQ8N1F8 1099 aa17.69■□□□□ 0.42
CDC42SE1-205ENST00000491825 F5H6K3 240 aa17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 PGK2P07205 417 aa17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 KLRC3Q07444 240 aa17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 FAM47AQ5JRC9 791 aa17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 ZNF444Q8N0Y2 327 aaPredicted RBP17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 ARRDC4Q8NCT1 418 aa17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 NEDD1Q8NHV4 660 aa17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 MMP19Q99542 508 aa17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 SLF1Q9BQI6 1058 aa17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 UBE2OQ9C0C9 1292 aaKnown RBP17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 CNNM2Q9H8M5 875 aa17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 NRBP1Q9UHY1 535 aa17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 DIS3Q9Y2L1 958 aaKnown RBP17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 NEDD4P46934 1319 aa17.68■□□□□ 0.42
CDC42SE1-205ENST00000491825 RAD21O60216 631 aa17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 TSPY3P0CV98 308 aa17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 TSPY8P0CW00 308 aa17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 COPB2P35606 906 aa17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 RTP1P59025 263 aa17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 MDM2Q00987 491 aaPredicted RBP17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 KCTD2Q14681 263 aa17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 SNX17Q15036 470 aa17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 MKL1Q969V6 931 aa17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 CEP95Q96GE4 821 aa17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 TINF2Q9BSI4 451 aa17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 TEX13BQ9BXU2 312 aa17.67■□□□□ 0.42
CDC42SE1-205ENST00000491825 SLC27A2O14975 620 aa17.66■□□□□ 0.42
CDC42SE1-205ENST00000491825 ATP2A1O14983 1001 aa17.66■□□□□ 0.42
CDC42SE1-205ENST00000491825 LRRC41Q15345 812 aa17.66■□□□□ 0.42
CDC42SE1-205ENST00000491825 PPP4R3BQ5MIZ7 849 aa17.66■□□□□ 0.42
CDC42SE1-205ENST00000491825 RNF20Q5VTR2 975 aa17.66■□□□□ 0.42
CDC42SE1-205ENST00000491825 CREB3L3Q68CJ9 461 aa17.66■□□□□ 0.42
CDC42SE1-205ENST00000491825 ESR2Q92731 530 aa17.66■□□□□ 0.42
CDC42SE1-205ENST00000491825 KRT23Q9C075 422 aa17.66■□□□□ 0.42
CDC42SE1-205ENST00000491825 MTMR4Q9NYA4 1195 aa17.66■□□□□ 0.42
CDC42SE1-205ENST00000491825 SYNPO2Q9UMS6 1093 aa17.66■□□□□ 0.42
CDC42SE1-205ENST00000491825 RIPK3Q9Y572 518 aa17.66■□□□□ 0.42
CDC42SE1-205ENST00000491825 COL11A1P12107 1806 aaPredicted RBP17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 LAMA2P24043 3122 aaKnown RBP17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 TSPY2A6NKD2 308 aa17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 KBTBD13C9JR72 458 aa17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 ZNF865P0CJ78 1059 aaPredicted RBP17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 TAL1P17542 331 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms