RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 TSPY3P0CV98 308 aa15.06■□□□□ 0
SEC61A1-206ENST00000491668 TSPY8P0CW00 308 aa15.06■□□□□ 0
SEC61A1-206ENST00000491668 HSPD1P10809 573 aaKnown RBP15.06■□□□□ 0
SEC61A1-206ENST00000491668 NOVP48745 357 aa15.06■□□□□ 0
SEC61A1-206ENST00000491668 MAML3Q96JK9 1138 aa15.06■□□□□ 0
SEC61A1-206ENST00000491668 TRIM6-TRIM34B2RNG4 842 aa15.05■□□□□ -0
SEC61A1-206ENST00000491668 EVI5O60447 810 aa15.05■□□□□ -0
SEC61A1-206ENST00000491668 FCER1AP12319 257 aa15.05■□□□□ -0
SEC61A1-206ENST00000491668 SDSP20132 328 aa15.05■□□□□ -0
SEC61A1-206ENST00000491668 PDE4AP27815 886 aa15.05■□□□□ -0
SEC61A1-206ENST00000491668 PRAMEF19Q5SWL8 479 aa15.05■□□□□ -0
SEC61A1-206ENST00000491668 SLFN13Q68D06 897 aa15.05■□□□□ -0
SEC61A1-206ENST00000491668 PRPF38AQ8NAV1 312 aaKnown RBP15.05■□□□□ -0
SEC61A1-206ENST00000491668 RILPL2Q969X0 211 aa15.05■□□□□ -0
SEC61A1-206ENST00000491668 C11orf49Q9H6J7 331 aa15.05■□□□□ -0
SEC61A1-206ENST00000491668 PCDH10Q9P2E7 1040 aa15.05■□□□□ -0
SEC61A1-206ENST00000491668 DDX20Q9UHI6 824 aaKnown RBP15.05■□□□□ -0
SEC61A1-206ENST00000491668 CCDC171Q6TFL3 1326 aa15.05■□□□□ -0
SEC61A1-206ENST00000491668 ZMYM6O95789 1325 aa15.04■□□□□ -0
SEC61A1-206ENST00000491668 ATP2A1O14983 1001 aa15.04■□□□□ -0
SEC61A1-206ENST00000491668 ZNF792Q3KQV3 632 aa15.04■□□□□ -0
SEC61A1-206ENST00000491668 SNRNP48Q6IEG0 339 aaKnown RBP15.04■□□□□ -0
SEC61A1-206ENST00000491668 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
SEC61A1-206ENST00000491668 KIFC2Q96AC6 838 aa15.04■□□□□ -0
SEC61A1-206ENST00000491668 CHMP4CQ96CF2 233 aa15.04■□□□□ -0
SEC61A1-206ENST00000491668 MMP19Q99542 508 aa15.04■□□□□ -0
SEC61A1-206ENST00000491668 TEX13BQ9BXU2 312 aa15.04■□□□□ -0
SEC61A1-206ENST00000491668 SLC38A10Q9HBR0 1119 aa15.04■□□□□ -0
SEC61A1-206ENST00000491668 RBM27Q9P2N5 1060 aaKnown RBP15.04■□□□□ -0
SEC61A1-206ENST00000491668 PLXNA1Q9UIW2 1896 aa15.03■□□□□ -0
SEC61A1-206ENST00000491668 TSPY2A6NKD2 308 aa15.03■□□□□ -0
SEC61A1-206ENST00000491668 RANBP6O60518 1105 aaKnown RBP15.03■□□□□ -0
SEC61A1-206ENST00000491668 BMP3P12645 472 aa15.03■□□□□ -0
SEC61A1-206ENST00000491668 CNGA1P29973 690 aa15.03■□□□□ -0
SEC61A1-206ENST00000491668 FXR1P51114 621 aaKnown RBP eCLIP15.03■□□□□ -0
SEC61A1-206ENST00000491668 TBC1D10CQ8IV04 446 aa15.03■□□□□ -0
SEC61A1-206ENST00000491668 GMCL1Q96IK5 515 aa15.03■□□□□ -0
SEC61A1-206ENST00000491668 RAVER2Q9HCJ3 691 aaKnown RBP15.03■□□□□ -0
SEC61A1-206ENST00000491668 FEM1BQ9UK73 627 aa15.03■□□□□ -0
SEC61A1-206ENST00000491668 NR2E3Q9Y5X4 410 aa15.03■□□□□ -0
SEC61A1-206ENST00000491668 ZNF536O15090 1300 aa15.02■□□□□ -0
SEC61A1-206ENST00000491668 DNAJC25-GNG10A0A024R161 153 aa15.02■□□□□ -0
SEC61A1-206ENST00000491668 TMEM232C9JQI7 657 aa15.02■□□□□ -0
SEC61A1-206ENST00000491668 TAL1P17542 331 aaPredicted RBP15.02■□□□□ -0
SEC61A1-206ENST00000491668 MCCP23508 829 aa15.02■□□□□ -0
SEC61A1-206ENST00000491668 HAND2P61296 217 aa15.02■□□□□ -0
SEC61A1-206ENST00000491668 KCTD2Q14681 263 aa15.02■□□□□ -0
SEC61A1-206ENST00000491668 ANO1Q5XXA6 986 aa15.02■□□□□ -0
SEC61A1-206ENST00000491668 C7orf61Q8IZ16 206 aa15.02■□□□□ -0
SEC61A1-206ENST00000491668 CPXCR1Q8N123 301 aa15.02■□□□□ -0
SEC61A1-206ENST00000491668 IL25Q9H293 177 aa15.02■□□□□ -0
SEC61A1-206ENST00000491668 STX8Q9UNK0 236 aa15.02■□□□□ -0
SEC61A1-206ENST00000491668 LAMA2P24043 3122 aaKnown RBP15.01□□□□□ -0.01
SEC61A1-206ENST00000491668 SMCHD1A6NHR9 2005 aa15.01□□□□□ -0.01
SEC61A1-206ENST00000491668 SEPT4O43236 478 aa15.01□□□□□ -0.01
SEC61A1-206ENST00000491668 LRRC26Q2I0M4 334 aa15.01□□□□□ -0.01
SEC61A1-206ENST00000491668 RCSD1Q6JBY9 416 aa15.01□□□□□ -0.01
SEC61A1-206ENST00000491668 CWC27Q6UX04 472 aaKnown RBP15.01□□□□□ -0.01
SEC61A1-206ENST00000491668 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.01□□□□□ -0.01
SEC61A1-206ENST00000491668 FGD4Q96M96 766 aa15.01□□□□□ -0.01
SEC61A1-206ENST00000491668 TINF2Q9BSI4 451 aa15.01□□□□□ -0.01
SEC61A1-206ENST00000491668 SLC5A4Q9NY91 659 aa15.01□□□□□ -0.01
SEC61A1-206ENST00000491668 DIS3Q9Y2L1 958 aaKnown RBP15.01□□□□□ -0.01
SEC61A1-206ENST00000491668 MSCO60682 206 aa15□□□□□ -0.01
SEC61A1-206ENST00000491668 ZBED4O75132 1171 aa15□□□□□ -0.01
SEC61A1-206ENST00000491668 GSPT1P15170 499 aaKnown RBP15□□□□□ -0.01
SEC61A1-206ENST00000491668 COPB2P35606 906 aa15□□□□□ -0.01
SEC61A1-206ENST00000491668 OAZ1P54368 228 aa15□□□□□ -0.01
SEC61A1-206ENST00000491668 SNAP25P60880 206 aa15□□□□□ -0.01
SEC61A1-206ENST00000491668 RRP12Q5JTH9 1297 aaKnown RBP15□□□□□ -0.01
SEC61A1-206ENST00000491668 KCTD1Q719H9 257 aa15□□□□□ -0.01
SEC61A1-206ENST00000491668 STAG1Q8WVM7 1258 aa15□□□□□ -0.01
SEC61A1-206ENST00000491668 ZMYND8Q9ULU4 1186 aaPredicted RBP15□□□□□ -0.01
SEC61A1-206ENST00000491668 NEDD4P46934 1319 aa14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 PLA2G6O60733 806 aa14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 SNAI1O95863 264 aaPredicted RBP14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 ZNF865P0CJ78 1059 aaPredicted RBP14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 SLC1A4P43007 532 aa14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 SLC4A3P48751 1232 aa14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 STAT2P52630 851 aa14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 AKNAD1Q5T1N1 836 aa14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 GJC2Q5T442 439 aaPredicted RBP14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 SKAP1Q86WV1 359 aa14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 AGBL1Q96MI9 1066 aa14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 TMEM47Q9BQJ4 181 aa14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 TCP11L1Q9NUJ3 509 aa14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 LAMA4Q16363 1823 aa14.99□□□□□ -0.01
SEC61A1-206ENST00000491668 DNM1LO00429 736 aa14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 SYN1P17600 705 aa14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 TTBK2Q6IQ55 1244 aa14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 MAMDC4Q6UXC1 1216 aa14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 FAM160B2Q86V87 743 aa14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 LENG1Q96BZ8 264 aaPredicted RBP14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 GDF15Q99988 308 aa14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 SENP6Q9GZR1 1112 aaPredicted RBP14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 TOMM22Q9NS69 142 aa14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 NRBP1Q9UHY1 535 aa14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 PRR12Q9ULL5 1215 aa14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 MTMR7Q9Y216 660 aa14.98□□□□□ -0.01
SEC61A1-206ENST00000491668 TOP1P11387 765 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms