RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 PABPC4Q13310 644 aaKnown RBP eCLIP12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 ANKRD1Q15327 319 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 CCDC82Q8N4S0 544 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 FANCBQ8NB91 859 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 PARK7Q99497 189 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 SLF1Q9BQI6 1058 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 R3HDMLQ9H3Y0 253 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 VAT1LQ9HCJ6 419 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 FEM1BQ9UK73 627 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 PPP1R9AQ9ULJ8 1098 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 SLC45A1Q9Y2W3 748 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 NID2Q14112 1375 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 ZSWIM8A7E2V4 1837 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 KLRF2D3W0D1 207 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 CYTH3O43739 400 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 DHX16O60231 1041 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 ADD1P35611 737 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 HERVK_113P62684 666 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 SCRN1Q12765 414 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 CRHR2Q13324 411 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 GPATCH4Q5T3I0 446 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 SYDE2Q5VT97 1194 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 OTUD7BQ6GQQ9 843 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 BTNL9Q6UXG8 535 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 TMTC3Q6ZXV5 915 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 FAM160B2Q86V87 743 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 SRBD1Q8N5C6 995 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 SMCR8Q8TEV9 937 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 ZNF274Q96GC6 653 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 PAGR1Q9BTK6 254 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 RNF186Q9NXI6 227 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 CPA4Q9UI42 421 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 PNMA3Q9UL41 463 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 PRR12Q9ULL5 1215 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 LIMCH1Q9UPQ0 1083 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 SMCHD1A6NHR9 2005 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 ADGRA2Q96PE1 1338 aa12.53□□□□□ -0.4
CACNA1C-227ENST00000491104 PFKFB2O60825 505 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 TRPA1O75762 1119 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 CNMDO75829 334 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 TBC1D8O95759 1140 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 KIF5BP33176 963 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 COG2Q14746 738 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 CCDC174Q6PII3 467 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 ADGRF4Q8IZF3 695 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 CHURC1Q8WUH1 139 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 MAP3K14Q99558 947 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 JMJD4Q9H9V9 463 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 TXNRD2Q9NNW7 524 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 ZCCHC17Q9NP64 241 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 BTBD7Q9P203 1132 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 TSKSQ9UJT2 592 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 CNTNAP5Q8WYK1 1306 aa12.52□□□□□ -0.41
CACNA1C-227ENST00000491104 hCG_1642624A0A1W2PR95 340 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 VWA5AO00534 786 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 CA12O43570 354 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 PLA2G6O60733 806 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 RCAN1P53805 252 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 CDC37Q16543 378 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 HOMER1Q86YM7 354 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 CPXCR1Q8N123 301 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 ANKRD13CQ8N6S4 541 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 PRPF38AQ8NAV1 312 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 REPS2Q8NFH8 660 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 GTF3C6Q969F1 213 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 PIGSQ96S52 555 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 ZFYVE28Q9HCC9 887 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 RAVER2Q9HCJ3 691 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 MYPNQ86TC9 1320 aa12.51□□□□□ -0.41
CACNA1C-227ENST00000491104 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 SLC4A3P48751 1232 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 GNAQP50148 359 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 FUT2Q10981 343 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 PLS1Q14651 629 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 TMEM132BQ14DG7 1078 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 NTRK3Q16288 839 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 QRICH1Q2TAL8 776 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 Q3C1V9 767 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 PHKBQ93100 1093 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 TMX3Q96JJ7 454 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 RANBP17Q9H2T7 1088 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 RIOX1Q9H6W3 641 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 HOXC10Q9NYD6 342 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 RBPJLQ9UBG7 517 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 ADAMTS5Q9UNA0 930 aa12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 CTDP1Q9Y5B0 961 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-227ENST00000491104 MGAMO43451 1857 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 ZNF536O15090 1300 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 CPLX1O14810 134 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 TLR2O60603 784 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 ZBED4O75132 1171 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 CTDNEP1O95476 244 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 BCRP11274 1271 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 MAP2K1Q02750 393 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms