RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 MS4A1P11836 297 aa24.8■■□□□ 1.56
CLIP2-208ENST00000491075 FAAP100Q0VG06 881 aa24.8■■□□□ 1.56
CLIP2-208ENST00000491075 ARPP21Q9UBL0 812 aaPredicted RBP24.8■■□□□ 1.56
CLIP2-208ENST00000491075 SLC4A4Q9Y6R1 1079 aa24.8■■□□□ 1.56
CLIP2-208ENST00000491075 MYH4Q9Y623 1939 aa24.8■■□□□ 1.56
CLIP2-208ENST00000491075 CTR9Q6PD62 1173 aa24.79■■□□□ 1.56
CLIP2-208ENST00000491075 SYMPKQ92797 1274 aaKnown RBP24.79■■□□□ 1.56
CLIP2-208ENST00000491075 SLF1Q9BQI6 1058 aa24.79■■□□□ 1.56
CLIP2-208ENST00000491075 FAM184BQ9ULE4 1060 aa24.79■■□□□ 1.56
CLIP2-208ENST00000491075 DNAJB2P25686 324 aa24.78■■□□□ 1.56
CLIP2-208ENST00000491075 ZSCAN25Q6NSZ9 544 aa24.78■■□□□ 1.56
CLIP2-208ENST00000491075 MAMDC4Q6UXC1 1216 aa24.78■■□□□ 1.56
CLIP2-208ENST00000491075 MROH7Q68CQ1 1323 aa24.78■■□□□ 1.56
CLIP2-208ENST00000491075 MCM3APO60318 1980 aa24.78■■□□□ 1.56
CLIP2-208ENST00000491075 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.77■■□□□ 1.56
CLIP2-208ENST00000491075 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.77■■□□□ 1.56
CLIP2-208ENST00000491075 SNRNP48Q6IEG0 339 aaKnown RBP24.77■■□□□ 1.56
CLIP2-208ENST00000491075 SIRT2Q8IXJ6 389 aa24.77■■□□□ 1.56
CLIP2-208ENST00000491075 KLHDC9Q8NEP7 349 aa24.77■■□□□ 1.56
CLIP2-208ENST00000491075 DDX11Q96FC9 970 aa24.77■■□□□ 1.56
CLIP2-208ENST00000491075 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.77■■□□□ 1.56
CLIP2-208ENST00000491075 DNAJC25-GNG10A0A024R161 153 aa24.76■■□□□ 1.55
CLIP2-208ENST00000491075 DUSP11O75319 330 aaKnown RBP24.76■■□□□ 1.55
CLIP2-208ENST00000491075 CHGBP05060 677 aa24.76■■□□□ 1.55
CLIP2-208ENST00000491075 ZNF467Q7Z7K2 595 aaPredicted RBP24.76■■□□□ 1.55
CLIP2-208ENST00000491075 ZHX1Q9UKY1 873 aaPredicted RBP24.76■■□□□ 1.55
CLIP2-208ENST00000491075 TBX21Q9UL17 535 aa24.76■■□□□ 1.55
CLIP2-208ENST00000491075 DDX19BQ9UMR2 479 aa24.76■■□□□ 1.55
CLIP2-208ENST00000491075 SNAI1O95863 264 aaPredicted RBP24.75■■□□□ 1.55
CLIP2-208ENST00000491075 TIMP1P01033 207 aa24.75■■□□□ 1.55
CLIP2-208ENST00000491075 CST5P28325 142 aaPredicted RBP24.75■■□□□ 1.55
CLIP2-208ENST00000491075 KCNA10Q16322 511 aa24.75■■□□□ 1.55
CLIP2-208ENST00000491075 CCSAPQ6IQ19 270 aaPredicted RBP24.75■■□□□ 1.55
CLIP2-208ENST00000491075 PRPF38AQ8NAV1 312 aaKnown RBP24.75■■□□□ 1.55
CLIP2-208ENST00000491075 GLT1D1Q96MS3 346 aa24.75■■□□□ 1.55
CLIP2-208ENST00000491075 NUP88Q99567 741 aaPredicted RBP24.75■■□□□ 1.55
CLIP2-208ENST00000491075 PUS7LQ9H0K6 701 aaKnown RBP24.75■■□□□ 1.55
CLIP2-208ENST00000491075 ZBTB40Q9NUA8 1239 aa24.75■■□□□ 1.55
CLIP2-208ENST00000491075 NYAP2Q9P242 653 aa24.75■■□□□ 1.55
CLIP2-208ENST00000491075 TTC28Q96AY4 2481 aa24.75■■□□□ 1.55
CLIP2-208ENST00000491075 ATP2A1O14983 1001 aa24.74■■□□□ 1.55
CLIP2-208ENST00000491075 GRIN2CQ14957 1233 aa24.74■■□□□ 1.55
CLIP2-208ENST00000491075 CCDC174Q6PII3 467 aa24.74■■□□□ 1.55
CLIP2-208ENST00000491075 PRDM6Q9NQX0 595 aa24.74■■□□□ 1.55
CLIP2-208ENST00000491075 RIPK3Q9Y572 518 aa24.74■■□□□ 1.55
CLIP2-208ENST00000491075 ELP1O95163 1332 aa24.74■■□□□ 1.55
CLIP2-208ENST00000491075 F5H6K3 240 aa24.73■■□□□ 1.55
CLIP2-208ENST00000491075 NDUFB10O96000 172 aa24.73■■□□□ 1.55
CLIP2-208ENST00000491075 RASA1P20936 1047 aa24.73■■□□□ 1.55
CLIP2-208ENST00000491075 KLRC3Q07444 240 aa24.73■■□□□ 1.55
CLIP2-208ENST00000491075 SBK1Q52WX2 424 aa24.73■■□□□ 1.55
CLIP2-208ENST00000491075 MFSD5Q6N075 450 aa24.73■■□□□ 1.55
CLIP2-208ENST00000491075 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.73■■□□□ 1.55
CLIP2-208ENST00000491075 PCSK9Q8NBP7 692 aaKnown RBP24.73■■□□□ 1.55
CLIP2-208ENST00000491075 TIFAQ96CG3 184 aa24.73■■□□□ 1.55
CLIP2-208ENST00000491075 ZNF576Q9H609 170 aa24.73■■□□□ 1.55
CLIP2-208ENST00000491075 SPC25Q9HBM1 224 aa24.73■■□□□ 1.55
CLIP2-208ENST00000491075 MYADML2A6NDP7 307 aa24.72■■□□□ 1.55
CLIP2-208ENST00000491075 PPIGQ13427 754 aaKnown RBP eCLIP24.72■■□□□ 1.55
CLIP2-208ENST00000491075 ACVR2BQ13705 512 aa24.72■■□□□ 1.55
CLIP2-208ENST00000491075 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.72■■□□□ 1.55
CLIP2-208ENST00000491075 MKNK2Q9HBH9 465 aa24.72■■□□□ 1.55
CLIP2-208ENST00000491075 CTDP1Q9Y5B0 961 aaPredicted RBP24.72■■□□□ 1.55
CLIP2-208ENST00000491075 ZBED4O75132 1171 aa24.71■■□□□ 1.55
CLIP2-208ENST00000491075 C6orf222P0C671 652 aaPredicted RBP24.71■■□□□ 1.55
CLIP2-208ENST00000491075 GIMAP6Q6P9H5 292 aa24.71■■□□□ 1.55
CLIP2-208ENST00000491075 ABHD16BQ9H3Z7 469 aa24.71■■□□□ 1.55
CLIP2-208ENST00000491075 CHMP4BQ9H444 224 aaKnown RBP24.71■■□□□ 1.55
CLIP2-208ENST00000491075 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.71■■□□□ 1.55
CLIP2-208ENST00000491075 MUC3AQ02505 3323 aa24.7■■□□□ 1.54
CLIP2-208ENST00000491075 CHD9Q3L8U1 2897 aa24.7■■□□□ 1.54
CLIP2-208ENST00000491075 ASGR1P07306 291 aa24.7■■□□□ 1.54
CLIP2-208ENST00000491075 CDK7P50613 346 aa24.7■■□□□ 1.54
CLIP2-208ENST00000491075 TJAP1Q5JTD0 557 aa24.7■■□□□ 1.54
CLIP2-208ENST00000491075 CPXCR1Q8N123 301 aa24.7■■□□□ 1.54
CLIP2-208ENST00000491075 USP38Q8NB14 1042 aa24.7■■□□□ 1.54
CLIP2-208ENST00000491075 STRBPQ96SI9 672 aaKnown RBP24.7■■□□□ 1.54
CLIP2-208ENST00000491075 UPF3AQ9H1J1 476 aaKnown RBP24.7■■□□□ 1.54
CLIP2-208ENST00000491075 FBXO40Q9UH90 709 aa24.7■■□□□ 1.54
CLIP2-208ENST00000491075 COG6Q9Y2V7 657 aa24.7■■□□□ 1.54
CLIP2-208ENST00000491075 A0A0U1RQG5 324 aaPredicted RBP24.69■■□□□ 1.54
CLIP2-208ENST00000491075 SLC4A3P48751 1232 aa24.69■■□□□ 1.54
CLIP2-208ENST00000491075 GJA9P57773 515 aa24.69■■□□□ 1.54
CLIP2-208ENST00000491075 CCDC144BQ3MJ40 725 aa24.69■■□□□ 1.54
CLIP2-208ENST00000491075 ANKRD35Q8N283 1001 aa24.69■■□□□ 1.54
CLIP2-208ENST00000491075 SLC38A10Q9HBR0 1119 aa24.69■■□□□ 1.54
CLIP2-208ENST00000491075 GSG1L2A8MUP6 293 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 ADCY6O43306 1168 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 OAZ1P54368 228 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 TMEM240Q5SV17 173 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 TMEM199Q8N511 208 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 CHST13Q8NET6 341 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 KIFC2Q96AC6 838 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 VTI1AQ96AJ9 217 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 LRRCC1Q9C099 1032 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 RAVER2Q9HCJ3 691 aaKnown RBP24.68■■□□□ 1.54
CLIP2-208ENST00000491075 CLIP2Q9UDT6 1046 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 FEM1BQ9UK73 627 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 SYNPO2Q9UMS6 1093 aa24.68■■□□□ 1.54
CLIP2-208ENST00000491075 IGKV6D-41A0A0C4DH26 115 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms