RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 TOX2Q96NM4 488 aa18.49■□□□□ 0.55
SCAMP3-208ENST00000490999 PLXNA1Q9UIW2 1896 aa18.49■□□□□ 0.55
SCAMP3-208ENST00000490999 SMCHD1A6NHR9 2005 aa18.49■□□□□ 0.55
SCAMP3-208ENST00000490999 REV3LO60673 3130 aa18.48■□□□□ 0.55
SCAMP3-208ENST00000490999 SNAI1O95863 264 aaPredicted RBP18.48■□□□□ 0.55
SCAMP3-208ENST00000490999 C6orf222P0C671 652 aaPredicted RBP18.48■□□□□ 0.55
SCAMP3-208ENST00000490999 SLC4A3P48751 1232 aa18.48■□□□□ 0.55
SCAMP3-208ENST00000490999 SNRNP48Q6IEG0 339 aaKnown RBP18.48■□□□□ 0.55
SCAMP3-208ENST00000490999 CCSAPQ6IQ19 270 aaPredicted RBP18.48■□□□□ 0.55
SCAMP3-208ENST00000490999 MFSD5Q6N075 450 aa18.48■□□□□ 0.55
SCAMP3-208ENST00000490999 KLHDC9Q8NEP7 349 aa18.48■□□□□ 0.55
SCAMP3-208ENST00000490999 TSEN34Q9BSV6 310 aaKnown RBP18.48■□□□□ 0.55
SCAMP3-208ENST00000490999 DIS3Q9Y2L1 958 aaKnown RBP18.48■□□□□ 0.55
SCAMP3-208ENST00000490999 MYH8P13535 1937 aa18.48■□□□□ 0.55
SCAMP3-208ENST00000490999 MOXD2PA6NHM9 499 aa18.47■□□□□ 0.55
SCAMP3-208ENST00000490999 PPIGQ13427 754 aaKnown RBP eCLIP18.47■□□□□ 0.55
SCAMP3-208ENST00000490999 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
SCAMP3-208ENST00000490999 GLT1D1Q96MS3 346 aa18.47■□□□□ 0.55
SCAMP3-208ENST00000490999 ASB2Q96Q27 587 aa18.47■□□□□ 0.55
SCAMP3-208ENST00000490999 GOPCQ9HD26 462 aa18.47■□□□□ 0.55
SCAMP3-208ENST00000490999 FAM184BQ9ULE4 1060 aa18.47■□□□□ 0.55
SCAMP3-208ENST00000490999 RIPK3Q9Y572 518 aa18.47■□□□□ 0.55
SCAMP3-208ENST00000490999 USP17L12C9JPN9 530 aa18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 USP17L21D6R901 530 aa18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 IGFBP4P22692 258 aa18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 C12orf60Q5U649 245 aa18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 RASIP1Q5U651 963 aa18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 C16orf86Q6ZW13 317 aa18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 ZNF365Q70YC5 407 aa18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 RHPN1Q8TCX5 695 aa18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 VTI1AQ96AJ9 217 aa18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 NECAB3Q96P71 396 aaPredicted RBP18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 UHRF1Q96T88 793 aaPredicted RBP18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 TEX13BQ9BXU2 312 aa18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 CXXC1Q9P0U4 656 aaPredicted RBP18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 BAZ2AQ9UIF9 1905 aaKnown RBP18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 SYNGAP1Q96PV0 1343 aa18.46■□□□□ 0.55
SCAMP3-208ENST00000490999 ASGR1P07306 291 aa18.45■□□□□ 0.54
SCAMP3-208ENST00000490999 ATXN2LQ8WWM7 1075 aaKnown RBP18.45■□□□□ 0.54
SCAMP3-208ENST00000490999 DDX11Q96FC9 970 aa18.45■□□□□ 0.54
SCAMP3-208ENST00000490999 CCDC17Q96LX7 622 aa18.45■□□□□ 0.54
SCAMP3-208ENST00000490999 SLF1Q9BQI6 1058 aa18.45■□□□□ 0.54
SCAMP3-208ENST00000490999 NKX2-4Q9H2Z4 354 aa18.45■□□□□ 0.54
SCAMP3-208ENST00000490999 MROH7Q68CQ1 1323 aa18.45■□□□□ 0.54
SCAMP3-208ENST00000490999 DUSP11O75319 330 aaKnown RBP18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 CYP2C18P33260 490 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 COPB2P35606 906 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 ADD2P35612 726 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 AKNAD1Q5T1N1 836 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 PSRC1Q6PGN9 363 aaPredicted RBP18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 FAM126BQ8IXS8 530 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 CPXCR1Q8N123 301 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 STK11IPQ8N1F8 1099 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 MICALL1Q8N3F8 863 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 TMEM199Q8N511 208 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 FGD4Q96M96 766 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 KANSL2Q9H9L4 492 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 ATP8A2Q9NTI2 1148 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 YBX2Q9Y2T7 364 aaKnown RBP18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 ZNFX1Q9P2E3 1918 aaKnown RBP18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 UMODL1Q5DID0 1318 aa18.44■□□□□ 0.54
SCAMP3-208ENST00000490999 DNAJC25-GNG10A0A024R161 153 aa18.43■□□□□ 0.54
SCAMP3-208ENST00000490999 A0A0U1RQG5 324 aaPredicted RBP18.43■□□□□ 0.54
SCAMP3-208ENST00000490999 PTGS1P23219 599 aa18.43■□□□□ 0.54
SCAMP3-208ENST00000490999 CST5P28325 142 aaPredicted RBP18.43■□□□□ 0.54
SCAMP3-208ENST00000490999 CDK7P50613 346 aa18.43■□□□□ 0.54
SCAMP3-208ENST00000490999 ACVR2BQ13705 512 aa18.43■□□□□ 0.54
SCAMP3-208ENST00000490999 CCDC144BQ3MJ40 725 aa18.43■□□□□ 0.54
SCAMP3-208ENST00000490999 CCDC174Q6PII3 467 aa18.43■□□□□ 0.54
SCAMP3-208ENST00000490999 AMOTL1Q8IY63 956 aa18.43■□□□□ 0.54
SCAMP3-208ENST00000490999 PAG1Q9NWQ8 432 aa18.43■□□□□ 0.54
SCAMP3-208ENST00000490999 ELP1O95163 1332 aa18.43■□□□□ 0.54
SCAMP3-208ENST00000490999 ARVCFO00192 962 aa18.42■□□□□ 0.54
SCAMP3-208ENST00000490999 IFIT2P09913 472 aaKnown RBP18.42■□□□□ 0.54
SCAMP3-208ENST00000490999 MRPS5P82675 430 aaKnown RBP18.42■□□□□ 0.54
SCAMP3-208ENST00000490999 BEX3Q00994 111 aa18.42■□□□□ 0.54
SCAMP3-208ENST00000490999 MAMDC4Q6UXC1 1216 aa18.42■□□□□ 0.54
SCAMP3-208ENST00000490999 MSL3Q8N5Y2 521 aaKnown RBP18.42■□□□□ 0.54
SCAMP3-208ENST00000490999 IL27Q8NEV9 243 aa18.42■□□□□ 0.54
SCAMP3-208ENST00000490999 BOLA2Q9H3K6 86 aa18.42■□□□□ 0.54
SCAMP3-208ENST00000490999 RAVER2Q9HCJ3 691 aaKnown RBP18.42■□□□□ 0.54
SCAMP3-208ENST00000490999 SLC4A4Q9Y6R1 1079 aa18.42■□□□□ 0.54
SCAMP3-208ENST00000490999 NDUFB10O96000 172 aa18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 RABGGTBP53611 331 aa18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 RAB30Q15771 203 aa18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 GNASQ5JWF2 1037 aa18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 CTR9Q6PD62 1173 aa18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 ARMCX2Q7L311 632 aa18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 CLASRPQ8N2M8 674 aaKnown RBP18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 PCSK9Q8NBP7 692 aaKnown RBP18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 PANK1Q8TE04 598 aa18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 UPF3AQ9H1J1 476 aaKnown RBP18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 HOMER2Q9NSB8 354 aa18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 MSRAQ9UJ68 235 aa18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 DDX49Q9Y6V7 483 aaKnown RBP18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 ZBED9Q6R2W3 1325 aa18.41■□□□□ 0.54
SCAMP3-208ENST00000490999 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms