RNA–Protein interactions for RNA: ENST00000490895.5

IMP4-216, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-216ENST00000490895 FRMPD3Q5JV73 1810 aa18.21■□□□□ 0.51
IMP4-216ENST00000490895 ZNFX1Q9P2E3 1918 aaKnown RBP18.2■□□□□ 0.5
IMP4-216ENST00000490895 ZBED4O75132 1171 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 PGK2P07205 417 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 FGRP09769 529 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 BMP3P12645 472 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 LRRC26Q2I0M4 334 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 PPP4R3BQ5MIZ7 849 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 PRAMEF19Q5SWL8 479 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 SNRNP48Q6IEG0 339 aaKnown RBP18.2■□□□□ 0.5
IMP4-216ENST00000490895 PLEKHM2Q8IWE5 1019 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 KIFC2Q96AC6 838 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 GMCL1Q96IK5 515 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 OSBPL3Q9H4L5 887 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 SLC38A10Q9HBR0 1119 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 IL17RBQ9NRM6 502 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 NRBP1Q9UHY1 535 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 ZMYND8Q9ULU4 1186 aaPredicted RBP18.2■□□□□ 0.5
IMP4-216ENST00000490895 RIPK3Q9Y572 518 aa18.2■□□□□ 0.5
IMP4-216ENST00000490895 DNAH12Q6ZR08 3092 aa18.19■□□□□ 0.5
IMP4-216ENST00000490895 A0A1W2PPC1 479 aa18.19■□□□□ 0.5
IMP4-216ENST00000490895 TSPY2A6NKD2 308 aa18.19■□□□□ 0.5
IMP4-216ENST00000490895 TRIM6-TRIM34B2RNG4 842 aa18.19■□□□□ 0.5
IMP4-216ENST00000490895 DNM1LO00429 736 aa18.19■□□□□ 0.5
IMP4-216ENST00000490895 ORC4O43929 436 aa18.19■□□□□ 0.5
IMP4-216ENST00000490895 FGAP02671 866 aa18.19■□□□□ 0.5
IMP4-216ENST00000490895 NMIQ13287 307 aaPredicted RBP18.19■□□□□ 0.5
IMP4-216ENST00000490895 ZNF589Q86UQ0 364 aaPredicted RBP18.19■□□□□ 0.5
IMP4-216ENST00000490895 GDF15Q99988 308 aa18.19■□□□□ 0.5
IMP4-216ENST00000490895 TINF2Q9BSI4 451 aa18.19■□□□□ 0.5
IMP4-216ENST00000490895 HSPD1P10809 573 aaKnown RBP18.18■□□□□ 0.5
IMP4-216ENST00000490895 NOVP48745 357 aa18.18■□□□□ 0.5
IMP4-216ENST00000490895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.18■□□□□ 0.5
IMP4-216ENST00000490895 CPXCR1Q8N123 301 aa18.18■□□□□ 0.5
IMP4-216ENST00000490895 ARRDC4Q8NCT1 418 aa18.18■□□□□ 0.5
IMP4-216ENST00000490895 RILPL2Q969X0 211 aa18.18■□□□□ 0.5
IMP4-216ENST00000490895 SENP6Q9GZR1 1112 aaPredicted RBP18.18■□□□□ 0.5
IMP4-216ENST00000490895 RAVER2Q9HCJ3 691 aaKnown RBP18.18■□□□□ 0.5
IMP4-216ENST00000490895 ZMYM6O95789 1325 aa18.18■□□□□ 0.5
IMP4-216ENST00000490895 DNAJC25-GNG10A0A024R161 153 aa18.17■□□□□ 0.5
IMP4-216ENST00000490895 RANBP6O60518 1105 aaKnown RBP18.17■□□□□ 0.5
IMP4-216ENST00000490895 NMT2O60551 498 aa18.17■□□□□ 0.5
IMP4-216ENST00000490895 FDX1P10109 184 aa18.17■□□□□ 0.5
IMP4-216ENST00000490895 BMP8BP34820 402 aa18.17■□□□□ 0.5
IMP4-216ENST00000490895 OAZ1P54368 228 aa18.17■□□□□ 0.5
IMP4-216ENST00000490895 ANO1Q5XXA6 986 aa18.17■□□□□ 0.5
IMP4-216ENST00000490895 STX8Q9UNK0 236 aa18.17■□□□□ 0.5
IMP4-216ENST00000490895 CTDP1Q9Y5B0 961 aaPredicted RBP18.17■□□□□ 0.5
IMP4-216ENST00000490895 CCDC171Q6TFL3 1326 aa18.17■□□□□ 0.5
IMP4-216ENST00000490895 TMEM232C9JQI7 657 aa18.16■□□□□ 0.5
IMP4-216ENST00000490895 PLA2G6O60733 806 aa18.16■□□□□ 0.5
IMP4-216ENST00000490895 SYN1P17600 705 aa18.16■□□□□ 0.5
IMP4-216ENST00000490895 SDSP20132 328 aa18.16■□□□□ 0.5
IMP4-216ENST00000490895 MCCP23508 829 aa18.16■□□□□ 0.5
IMP4-216ENST00000490895 SLC1A4P43007 532 aa18.16■□□□□ 0.5
IMP4-216ENST00000490895 STAT2P52630 851 aa18.16■□□□□ 0.5
IMP4-216ENST00000490895 GJC2Q5T442 439 aaPredicted RBP18.16■□□□□ 0.5
IMP4-216ENST00000490895 FAM160B2Q86V87 743 aa18.16■□□□□ 0.5
IMP4-216ENST00000490895 MSL3Q8N5Y2 521 aaKnown RBP18.16■□□□□ 0.5
IMP4-216ENST00000490895 CHURC1Q8WUH1 139 aa18.16■□□□□ 0.5
IMP4-216ENST00000490895 STAG1Q8WVM7 1258 aa18.16■□□□□ 0.5
IMP4-216ENST00000490895 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
IMP4-216ENST00000490895 TAL1P17542 331 aaPredicted RBP18.15■□□□□ 0.5
IMP4-216ENST00000490895 MAGEA10P43363 369 aaPredicted RBP18.15■□□□□ 0.5
IMP4-216ENST00000490895 SLC4A3P48751 1232 aa18.15■□□□□ 0.5
IMP4-216ENST00000490895 RCSD1Q6JBY9 416 aa18.15■□□□□ 0.5
IMP4-216ENST00000490895 CHST13Q8NET6 341 aa18.15■□□□□ 0.5
IMP4-216ENST00000490895 FBXO40Q9UH90 709 aa18.15■□□□□ 0.5
IMP4-216ENST00000490895 SUPT16HQ9Y5B9 1047 aaKnown RBP18.15■□□□□ 0.5
IMP4-216ENST00000490895 PLXNA1Q9UIW2 1896 aa18.14■□□□□ 0.49
IMP4-216ENST00000490895 SZT2Q5T011 3432 aa18.14■□□□□ 0.49
IMP4-216ENST00000490895 KBTBD13C9JR72 458 aa18.14■□□□□ 0.49
IMP4-216ENST00000490895 ZNF865P0CJ78 1059 aaPredicted RBP18.14■□□□□ 0.49
IMP4-216ENST00000490895 LRRC41Q15345 812 aa18.14■□□□□ 0.49
IMP4-216ENST00000490895 MAMDC4Q6UXC1 1216 aa18.14■□□□□ 0.49
IMP4-216ENST00000490895 ZNF467Q7Z7K2 595 aaPredicted RBP18.14■□□□□ 0.49
IMP4-216ENST00000490895 ISY1Q9ULR0 285 aaKnown RBP18.14■□□□□ 0.49
IMP4-216ENST00000490895 SYNGAP1Q96PV0 1343 aa18.14■□□□□ 0.49
IMP4-216ENST00000490895 LAMA3Q16787 3333 aa18.14■□□□□ 0.49
IMP4-216ENST00000490895 SMCHD1A6NHR9 2005 aa18.13■□□□□ 0.49
IMP4-216ENST00000490895 RARBP10826 455 aa18.13■□□□□ 0.49
IMP4-216ENST00000490895 ATN1P54259 1190 aaPredicted RBP18.13■□□□□ 0.49
IMP4-216ENST00000490895 MFAP1P55081 439 aaKnown RBP18.13■□□□□ 0.49
IMP4-216ENST00000490895 KCTD1Q719H9 257 aa18.13■□□□□ 0.49
IMP4-216ENST00000490895 ANKRD35Q8N283 1001 aa18.13■□□□□ 0.49
IMP4-216ENST00000490895 CHMP4CQ96CF2 233 aa18.13■□□□□ 0.49
IMP4-216ENST00000490895 TOMM22Q9NS69 142 aa18.13■□□□□ 0.49
IMP4-216ENST00000490895 TCP11L1Q9NUJ3 509 aa18.13■□□□□ 0.49
IMP4-216ENST00000490895 CNPY2Q9Y2B0 182 aa18.13■□□□□ 0.49
IMP4-216ENST00000490895 ZNF536O15090 1300 aa18.13■□□□□ 0.49
IMP4-216ENST00000490895 SNAI1O95863 264 aaPredicted RBP18.12■□□□□ 0.49
IMP4-216ENST00000490895 PCP11498 1178 aaKnown RBP18.12■□□□□ 0.49
IMP4-216ENST00000490895 HAND2P61296 217 aa18.12■□□□□ 0.49
IMP4-216ENST00000490895 IKQ13123 557 aaPredicted RBP18.12■□□□□ 0.49
IMP4-216ENST00000490895 RRP12Q5JTH9 1297 aaKnown RBP18.12■□□□□ 0.49
IMP4-216ENST00000490895 RASGRP2Q7LDG7 609 aa18.12■□□□□ 0.49
IMP4-216ENST00000490895 FGD4Q96M96 766 aa18.12■□□□□ 0.49
IMP4-216ENST00000490895 XPNPEP3Q9NQH7 507 aa18.12■□□□□ 0.49
IMP4-216ENST00000490895 MYCNP04198 464 aaPredicted RBP18.11■□□□□ 0.49
IMP4-216ENST00000490895 TOP1P11387 765 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms