RNA–Protein interactions for RNA: ENST00000490812.5

PTPN18-215, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-215ENST00000490812 COLQQ9Y215 455 aaPredicted RBP25.24■■□□□ 1.63
PTPN18-215ENST00000490812 BMP3P12645 472 aa25.23■■□□□ 1.63
PTPN18-215ENST00000490812 GMCL1Q96IK5 515 aa25.23■■□□□ 1.63
PTPN18-215ENST00000490812 MAML3Q96JK9 1138 aa25.23■■□□□ 1.63
PTPN18-215ENST00000490812 PLXNA1Q9UIW2 1896 aa25.23■■□□□ 1.63
PTPN18-215ENST00000490812 TRIOBPQ9H2D6 2365 aa25.22■■□□□ 1.63
PTPN18-215ENST00000490812 ZBED4O75132 1171 aa25.22■■□□□ 1.63
PTPN18-215ENST00000490812 CNGA1P29973 690 aa25.22■■□□□ 1.63
PTPN18-215ENST00000490812 SNRNP48Q6IEG0 339 aaKnown RBP25.22■■□□□ 1.63
PTPN18-215ENST00000490812 TRPV1Q8NER1 839 aa25.22■■□□□ 1.63
PTPN18-215ENST00000490812 KIFC2Q96AC6 838 aa25.22■■□□□ 1.63
PTPN18-215ENST00000490812 SLC38A10Q9HBR0 1119 aa25.22■■□□□ 1.63
PTPN18-215ENST00000490812 STX8Q9UNK0 236 aa25.22■■□□□ 1.63
PTPN18-215ENST00000490812 DIS3Q9Y2L1 958 aaKnown RBP25.22■■□□□ 1.63
PTPN18-215ENST00000490812 CTDP1Q9Y5B0 961 aaPredicted RBP25.22■■□□□ 1.63
PTPN18-215ENST00000490812 HIP1O00291 1037 aa25.21■■□□□ 1.63
PTPN18-215ENST00000490812 RANBP6O60518 1105 aaKnown RBP25.21■■□□□ 1.63
PTPN18-215ENST00000490812 FDX1P10109 184 aa25.21■■□□□ 1.63
PTPN18-215ENST00000490812 COL6A1P12109 1028 aa25.21■■□□□ 1.63
PTPN18-215ENST00000490812 NOVP48745 357 aa25.21■■□□□ 1.63
PTPN18-215ENST00000490812 OAZ1P54368 228 aa25.21■■□□□ 1.63
PTPN18-215ENST00000490812 INCENPQ9NQS7 918 aa25.21■■□□□ 1.63
PTPN18-215ENST00000490812 IL17RBQ9NRM6 502 aa25.21■■□□□ 1.63
PTPN18-215ENST00000490812 TACC3Q9Y6A5 838 aa25.21■■□□□ 1.63
PTPN18-215ENST00000490812 PFASO15067 1338 aa25.2■■□□□ 1.62
PTPN18-215ENST00000490812 PCP11498 1178 aaKnown RBP25.2■■□□□ 1.62
PTPN18-215ENST00000490812 STAT2P52630 851 aa25.2■■□□□ 1.62
PTPN18-215ENST00000490812 NRBP1Q9UHY1 535 aa25.2■■□□□ 1.62
PTPN18-215ENST00000490812 SEPT4O43236 478 aa25.19■■□□□ 1.62
PTPN18-215ENST00000490812 PGK2P07205 417 aa25.19■■□□□ 1.62
PTPN18-215ENST00000490812 SLC1A4P43007 532 aa25.19■■□□□ 1.62
PTPN18-215ENST00000490812 ZNF792Q3KQV3 632 aa25.19■■□□□ 1.62
PTPN18-215ENST00000490812 CHRDL2Q6WN34 429 aa25.19■■□□□ 1.62
PTPN18-215ENST00000490812 FAM160B2Q86V87 743 aa25.19■■□□□ 1.62
PTPN18-215ENST00000490812 DIAPH3Q9NSV4 1193 aa25.19■■□□□ 1.62
PTPN18-215ENST00000490812 TMEM232C9JQI7 657 aa25.18■■□□□ 1.62
PTPN18-215ENST00000490812 NMT2O60551 498 aa25.18■■□□□ 1.62
PTPN18-215ENST00000490812 PLA2G6O60733 806 aa25.18■■□□□ 1.62
PTPN18-215ENST00000490812 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.18■■□□□ 1.62
PTPN18-215ENST00000490812 CPXCR1Q8N123 301 aa25.18■■□□□ 1.62
PTPN18-215ENST00000490812 CHURC1Q8WUH1 139 aa25.18■■□□□ 1.62
PTPN18-215ENST00000490812 TOMM22Q9NS69 142 aa25.18■■□□□ 1.62
PTPN18-215ENST00000490812 RANBP2P49792 3224 aaKnown RBP25.17■■□□□ 1.62
PTPN18-215ENST00000490812 LAMA4Q16363 1823 aa25.17■■□□□ 1.62
PTPN18-215ENST00000490812 STAG1Q8WVM7 1258 aa25.17■■□□□ 1.62
PTPN18-215ENST00000490812 TINF2Q9BSI4 451 aa25.17■■□□□ 1.62
PTPN18-215ENST00000490812 TCP11L1Q9NUJ3 509 aa25.17■■□□□ 1.62
PTPN18-215ENST00000490812 FBXO40Q9UH90 709 aa25.17■■□□□ 1.62
PTPN18-215ENST00000490812 RIPK3Q9Y572 518 aa25.17■■□□□ 1.62
PTPN18-215ENST00000490812 DNM1LO00429 736 aa25.16■■□□□ 1.62
PTPN18-215ENST00000490812 MCCP23508 829 aa25.16■■□□□ 1.62
PTPN18-215ENST00000490812 RCSD1Q6JBY9 416 aa25.16■■□□□ 1.62
PTPN18-215ENST00000490812 MSL3Q8N5Y2 521 aaKnown RBP25.16■■□□□ 1.62
PTPN18-215ENST00000490812 CHST13Q8NET6 341 aa25.16■■□□□ 1.62
PTPN18-215ENST00000490812 RAVER2Q9HCJ3 691 aaKnown RBP25.16■■□□□ 1.62
PTPN18-215ENST00000490812 ISY1Q9ULR0 285 aaKnown RBP25.16■■□□□ 1.62
PTPN18-215ENST00000490812 NT5C2P49902 561 aa25.15■■□□□ 1.62
PTPN18-215ENST00000490812 RRP12Q5JTH9 1297 aaKnown RBP25.15■■□□□ 1.62
PTPN18-215ENST00000490812 AKNAD1Q5T1N1 836 aa25.15■■□□□ 1.62
PTPN18-215ENST00000490812 CWC27Q6UX04 472 aaKnown RBP25.15■■□□□ 1.62
PTPN18-215ENST00000490812 MFSD6Q6ZSS7 791 aa25.15■■□□□ 1.62
PTPN18-215ENST00000490812 C7orf61Q8IZ16 206 aa25.15■■□□□ 1.62
PTPN18-215ENST00000490812 ARRDC4Q8NCT1 418 aa25.15■■□□□ 1.62
PTPN18-215ENST00000490812 DDX11Q96FC9 970 aa25.15■■□□□ 1.62
PTPN18-215ENST00000490812 PRO3102Q9H379 93 aa25.15■■□□□ 1.62
PTPN18-215ENST00000490812 RNF41Q9H4P4 317 aaPredicted RBP25.15■■□□□ 1.62
PTPN18-215ENST00000490812 DNAJC25-GNG10A0A024R161 153 aa25.14■■□□□ 1.62
PTPN18-215ENST00000490812 HAND2P61296 217 aa25.14■■□□□ 1.62
PTPN18-215ENST00000490812 IKQ13123 557 aaPredicted RBP25.14■■□□□ 1.62
PTPN18-215ENST00000490812 PRAMEF19Q5SWL8 479 aa25.14■■□□□ 1.62
PTPN18-215ENST00000490812 DCAF4Q8WV16 495 aa25.14■■□□□ 1.62
PTPN18-215ENST00000490812 TOP1P11387 765 aaKnown RBP25.13■■□□□ 1.61
PTPN18-215ENST00000490812 RBM27Q9P2N5 1060 aaKnown RBP25.13■■□□□ 1.61
PTPN18-215ENST00000490812 ZNF213O14771 459 aa25.12■■□□□ 1.61
PTPN18-215ENST00000490812 PDE4AP27815 886 aa25.12■■□□□ 1.61
PTPN18-215ENST00000490812 SLC4A3P48751 1232 aa25.12■■□□□ 1.61
PTPN18-215ENST00000490812 KCTD1Q719H9 257 aa25.12■■□□□ 1.61
PTPN18-215ENST00000490812 ZNF467Q7Z7K2 595 aaPredicted RBP25.12■■□□□ 1.61
PTPN18-215ENST00000490812 TBC1D10CQ8IV04 446 aa25.12■■□□□ 1.61
PTPN18-215ENST00000490812 TTC14Q96N46 770 aa25.12■■□□□ 1.61
PTPN18-215ENST00000490812 SMCHD1A6NHR9 2005 aa25.12■■□□□ 1.61
PTPN18-215ENST00000490812 SYNGAP1Q96PV0 1343 aa25.12■■□□□ 1.61
PTPN18-215ENST00000490812 FXR1P51114 621 aaKnown RBP eCLIP25.11■■□□□ 1.61
PTPN18-215ENST00000490812 IRX6P78412 446 aaPredicted RBP25.11■■□□□ 1.61
PTPN18-215ENST00000490812 TKFCQ3LXA3 575 aa25.11■■□□□ 1.61
PTPN18-215ENST00000490812 MAMDC4Q6UXC1 1216 aa25.11■■□□□ 1.61
PTPN18-215ENST00000490812 ANKRD35Q8N283 1001 aa25.11■■□□□ 1.61
PTPN18-215ENST00000490812 ESR2Q92731 530 aa25.11■■□□□ 1.61
PTPN18-215ENST00000490812 TMEM47Q9BQJ4 181 aa25.11■■□□□ 1.61
PTPN18-215ENST00000490812 DSCC1Q9BVC3 393 aa25.11■■□□□ 1.61
PTPN18-215ENST00000490812 SENP6Q9GZR1 1112 aaPredicted RBP25.11■■□□□ 1.61
PTPN18-215ENST00000490812 CNPY2Q9Y2B0 182 aa25.11■■□□□ 1.61
PTPN18-215ENST00000490812 A0A1W2PPC1 479 aa25.1■■□□□ 1.61
PTPN18-215ENST00000490812 KBTBD13C9JR72 458 aa25.1■■□□□ 1.61
PTPN18-215ENST00000490812 LRRC26Q2I0M4 334 aa25.1■■□□□ 1.61
PTPN18-215ENST00000490812 TTC22Q5TAA0 569 aa25.1■■□□□ 1.61
PTPN18-215ENST00000490812 ACAD9Q9H845 621 aa25.1■■□□□ 1.61
PTPN18-215ENST00000490812 PRR12Q9ULL5 1215 aa25.1■■□□□ 1.61
PTPN18-215ENST00000490812 ZNF536O15090 1300 aa25.1■■□□□ 1.61
PTPN18-215ENST00000490812 RARBP10826 455 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms