RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 MAP7D2Q96T17 732 aa16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 HERC5Q9UII4 1024 aaKnown RBP16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 KIF4AO95239 1232 aa16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 RSBN1LQ6PCB5 846 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 STAG1Q8WVM7 1258 aa16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 CEP95Q96GE4 821 aa16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 TBC1D8BQ0IIM8 1120 aa16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 LRCH2Q5VUJ6 765 aa16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 NSUN7Q8NE18 718 aaKnown RBP16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 PGBD1Q96JS3 809 aa16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 AP5M1Q9H0R1 490 aa16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 PSMD14O00487 310 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 RNF169Q8NCN4 708 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 ALS2CR12Q96Q35 445 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 HOXC10Q9NYD6 342 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 LARSQ9P2J5 1176 aaKnown RBP16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 CEP83Q9Y592 693 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 IQGAP1P46940 1657 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 F5H6K3 240 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 KLRC3Q07444 240 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 RAPGEF1Q13905 1077 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 TBC1D10CQ8IV04 446 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 KIF18AQ8NI77 898 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 KDM3AQ9Y4C1 1321 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 EEF2P13639 858 aaKnown RBP16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 EIF2AK2P19525 551 aaKnown RBP16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 IGBP1P78318 339 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 TRPC3Q13507 836 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 WDR44Q5JSH3 913 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 FAM83BQ5T0W9 1011 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 CPVLQ9H3G5 476 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 HACL1Q9UJ83 578 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 ERCC3P19447 782 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 SNAP25P60880 206 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 SLC10A5Q5PT55 438 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 ANGEL2Q5VTE6 544 aaKnown RBP16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 LUZP1Q86V48 1076 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 GPBP1Q86WP2 473 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 UBXN4Q92575 508 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 GGA3Q9NZ52 723 aa16.06■□□□□ 0.16
ARHGEF39-205ENST00000490638 ITSN1Q15811 1721 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 SRGNP10124 158 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 CTR9Q6PD62 1173 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 TMX1Q9H3N1 280 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 IFNKQ9P0W0 207 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 BCL9O00512 1426 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 LMNB1P20700 586 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 TMOD1P28289 359 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 ADALQ6DHV7 355 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 FBXO33Q7Z6M2 555 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 TBCKQ8TEA7 893 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 CCDC42Q96M95 316 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 BLZF1Q9H2G9 400 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 NRBP2Q9NSY0 501 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 PCDHA4Q9UN74 947 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 POSTNQ15063 836 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 CCDC186Q7Z3E2 898 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 SAMD7Q7Z3H4 446 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 CDHR1Q96JP9 859 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 NOC4LQ9BVI4 516 aaKnown RBP16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 NBPF3Q9H094 633 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 GPBP1L1Q9HC44 474 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 SERTAD1Q9UHV2 236 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 CTNND2Q9UQB3 1225 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 TNS2Q63HR2 1409 aa16.05■□□□□ 0.16
ARHGEF39-205ENST00000490638 NEURL4Q96JN8 1562 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 NR5A1Q13285 461 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 FAM102BQ5T8I3 360 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 PRAMEF18Q5VWM3 479 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 MLKLQ8NB16 471 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 VPS16Q9H269 839 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 LUC7L2Q9Y383 392 aaKnown RBP16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 KDM6AO15550 1401 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 RGS22Q8NE09 1264 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 ZNF577Q9BSK1 485 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 TGFB2P61812 414 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 ALX1Q15699 326 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 SCAF8Q9UPN6 1271 aaKnown RBP16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 ABCC12Q96J65 1359 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 PNMA6FA0A0J9YX94 578 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 NMT2O60551 498 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 HOXA13P31271 388 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 ZBTB8OSQ8IWT0 167 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 HACE1Q8IYU2 909 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 RDH13Q8NBN7 331 aa16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 TDRD7Q8NHU6 1098 aaKnown RBP16.04■□□□□ 0.16
ARHGEF39-205ENST00000490638 RGS12O14924 1447 aa16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 AXDND1Q5T1B0 1012 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 CENPHQ9H3R5 247 aa16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 IWS1Q96ST2 819 aa16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 FOXP1Q9H334 677 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 CALUO43852 315 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 ERLIN1O75477 346 aa16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 PLEKHA8P1O95397 391 aa16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 TEX35Q5T0J7 233 aa16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 ATP6V0A1Q93050 837 aa16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 PKNOX2Q96KN3 472 aa16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 C16orf45Q96MC5 204 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 AIFM3Q96NN9 605 aa16.03■□□□□ 0.16
ARHGEF39-205ENST00000490638 hCG_1984214I3L0E3 225 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms