RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 PHRF1Q9P1Y6 1649 aaKnown RBP6.21□□□□□ -1.41
CSTF1-205ENST00000490539 KIF24Q5T7B8 1368 aa6.21□□□□□ -1.41
CSTF1-205ENST00000490539 SLIT3O75094 1523 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 PIK3C2AO00443 1686 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 PLCH1Q4KWH8 1693 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 ENC1O14682 589 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 SORBS3O60504 671 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 TRIM37O94972 964 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 CDPF1Q6NVV7 123 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 TMC4Q7Z404 712 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 PDZD3Q86UT5 571 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 EZH1Q92800 747 aaPredicted RBP6.21□□□□□ -1.42
CSTF1-205ENST00000490539 CAMKK2Q96RR4 588 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 METTL22Q9BUU2 404 aaPredicted RBP6.21□□□□□ -1.42
CSTF1-205ENST00000490539 BCL2L13Q9BXK5 485 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 SSU72Q9NP77 194 aaKnown RBP6.21□□□□□ -1.42
CSTF1-205ENST00000490539 WDR90Q96KV7 1748 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 ABCA3Q99758 1704 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 KIF7Q2M1P5 1343 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 PITPNM2Q9BZ72 1349 aa6.21□□□□□ -1.42
CSTF1-205ENST00000490539 TNRC18O15417 2968 aaPredicted RBP6.21□□□□□ -1.42
CSTF1-205ENST00000490539 ABCC6O95255 1503 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 RTL1A6NKG5 1358 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 CCDC7Q96M83 1385 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 TNS1Q9HBL0 1735 aaKnown RBP6.2□□□□□ -1.42
CSTF1-205ENST00000490539 OVOS2A0A0J9YW53 1432 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 OVOS2Q6IE36 1432 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 KIAA1324LA8MWY0 1029 aaPredicted RBP6.2□□□□□ -1.42
CSTF1-205ENST00000490539 EXOC5O00471 708 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 RNGTTO60942 597 aaKnown RBP6.2□□□□□ -1.42
CSTF1-205ENST00000490539 NFICP08651 508 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 TNNT2P45379 298 aaPredicted RBP6.2□□□□□ -1.42
CSTF1-205ENST00000490539 CYP27A1Q02318 531 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 DDB1Q16531 1140 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 CPSF6Q16630 551 aaKnown RBP eCLIP6.2□□□□□ -1.42
CSTF1-205ENST00000490539 PCNX4Q63HM2 1172 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 INTS5Q6P9B9 1019 aaKnown RBP6.2□□□□□ -1.42
CSTF1-205ENST00000490539 FAM196AQ6ZSG2 479 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 FBXO33Q7Z6M2 555 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 NPM2Q86SE8 214 aaKnown RBP6.2□□□□□ -1.42
CSTF1-205ENST00000490539 FBXL6Q8N531 539 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 RAPGEF4Q8WZA2 1011 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 LTV1Q96GA3 475 aaPredicted RBP6.2□□□□□ -1.42
CSTF1-205ENST00000490539 MFSD14AQ96MC6 490 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 TBC1D32Q96NH3 1257 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 OSBPL1AQ9BXW6 950 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 FAM105AQ9NUU6 356 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 CRIM1Q9NZV1 1036 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 VTI1BQ9UEU0 232 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 DAGLAQ9Y4D2 1042 aa6.2□□□□□ -1.42
CSTF1-205ENST00000490539 COL5A2P05997 1499 aaPredicted RBP6.2□□□□□ -1.42
CSTF1-205ENST00000490539 FLT4P35916 1363 aa6.19□□□□□ -1.42
CSTF1-205ENST00000490539 TMPRSS2O15393 492 aa6.19□□□□□ -1.42
CSTF1-205ENST00000490539 ZNF862O60290 1169 aa6.19□□□□□ -1.42
CSTF1-205ENST00000490539 HSPA1AP0DMV8 641 aaKnown RBP6.19□□□□□ -1.42
CSTF1-205ENST00000490539 HSPA1BP0DMV9 641 aaKnown RBP6.19□□□□□ -1.42
CSTF1-205ENST00000490539 IL2RBP14784 551 aa6.19□□□□□ -1.42
CSTF1-205ENST00000490539 HOXC9P31274 260 aa6.19□□□□□ -1.42
CSTF1-205ENST00000490539 ZNF252P-AS1Q0IIN9 211 aa6.19□□□□□ -1.42
CSTF1-205ENST00000490539 DDX10Q13206 875 aaKnown RBP6.19□□□□□ -1.42
CSTF1-205ENST00000490539 RRS1Q15050 365 aaKnown RBP6.19□□□□□ -1.42
CSTF1-205ENST00000490539 TAF1CQ15572 869 aaPredicted RBP6.19□□□□□ -1.42
CSTF1-205ENST00000490539 DUSP27Q5VZP5 1158 aa6.19□□□□□ -1.42
CSTF1-205ENST00000490539 TTBK2Q6IQ55 1244 aa6.19□□□□□ -1.42
CSTF1-205ENST00000490539 WDR89Q96FK6 387 aaPredicted RBP6.19□□□□□ -1.42
CSTF1-205ENST00000490539 GSX1Q9H4S2 264 aaPredicted RBP6.19□□□□□ -1.42
CSTF1-205ENST00000490539 ACSS3Q9H6R3 686 aa6.19□□□□□ -1.42
CSTF1-205ENST00000490539 PPP1R9AQ9ULJ8 1098 aa6.19□□□□□ -1.42
CSTF1-205ENST00000490539 MAP3K19Q56UN5 1328 aa6.19□□□□□ -1.42
CSTF1-205ENST00000490539 WDR64B1ANS9 1081 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 PAGE1O75459 146 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 MED26O95402 600 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 CELA3AP09093 270 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 BMP6P22004 513 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 HMGB2P26583 209 aaKnown RBP6.18□□□□□ -1.42
CSTF1-205ENST00000490539 ST13P50502 369 aaKnown RBP6.18□□□□□ -1.42
CSTF1-205ENST00000490539 RPS26P62854 115 aaKnown RBP6.18□□□□□ -1.42
CSTF1-205ENST00000490539 SMYD4Q8IYR2 804 aaPredicted RBP6.18□□□□□ -1.42
CSTF1-205ENST00000490539 SHKBP1Q8TBC3 707 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 STK35Q8TDR2 534 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 GPBAR1Q8TDU6 330 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 ELMO3Q96BJ8 720 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 CFAP53Q96M91 514 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 FANCD2OSQ96PS1 177 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 SEMA6CQ9H3T2 930 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 PCDHA4Q9UN74 947 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 LEMD3Q9Y2U8 911 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 NUP188Q5SRE5 1749 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 CRYBG1Q9Y4K1 1723 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 WASHC2AQ641Q2 1341 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 PARD3Q8TEW0 1356 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 CUL9Q8IWT3 2517 aa6.18□□□□□ -1.42
CSTF1-205ENST00000490539 RREB1Q92766 1687 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 NFAT5O94916 1531 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 ANP32CO43423 234 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 TGFB1P01137 390 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 ERVK-24P63145 666 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 HTRA3P83110 453 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 CNGB1Q14028 1251 aaPredicted RBP6.17□□□□□ -1.42
CSTF1-205ENST00000490539 ZC3H12AQ5D1E8 599 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms