RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 KIAA0355O15063 1070 aa14.07□□□□□ -0.16
FDPS-215ENST00000490140 PQBP1O60828 265 aaKnown RBP14.07□□□□□ -0.16
FDPS-215ENST00000490140 PGK1P00558 417 aa14.07□□□□□ -0.16
FDPS-215ENST00000490140 FDX1P10109 184 aa14.07□□□□□ -0.16
FDPS-215ENST00000490140 TDO2P48775 406 aa14.07□□□□□ -0.16
FDPS-215ENST00000490140 ZNF467Q7Z7K2 595 aaPredicted RBP14.07□□□□□ -0.16
FDPS-215ENST00000490140 SIRT2Q8IXJ6 389 aa14.07□□□□□ -0.16
FDPS-215ENST00000490140 TOX2Q96NM4 488 aa14.07□□□□□ -0.16
FDPS-215ENST00000490140 TMEM39AQ9NV64 488 aa14.07□□□□□ -0.16
FDPS-215ENST00000490140 SMCHD1A6NHR9 2005 aa14.07□□□□□ -0.16
FDPS-215ENST00000490140 TRIM43BA6NCK2 446 aa14.06□□□□□ -0.16
FDPS-215ENST00000490140 SLC3A2P08195 630 aaKnown RBP14.06□□□□□ -0.16
FDPS-215ENST00000490140 OAZ1P54368 228 aa14.06□□□□□ -0.16
FDPS-215ENST00000490140 C9orf50Q5SZB4 431 aa14.06□□□□□ -0.16
FDPS-215ENST00000490140 MAMDC4Q6UXC1 1216 aa14.06□□□□□ -0.16
FDPS-215ENST00000490140 ANKRD33Q7Z3H0 272 aa14.06□□□□□ -0.16
FDPS-215ENST00000490140 ZNF444Q8N0Y2 327 aaPredicted RBP14.06□□□□□ -0.16
FDPS-215ENST00000490140 KBTBD3Q8NAB2 608 aa14.06□□□□□ -0.16
FDPS-215ENST00000490140 PCSK9Q8NBP7 692 aaKnown RBP14.06□□□□□ -0.16
FDPS-215ENST00000490140 MAFAQ8NHW3 353 aaPredicted RBP14.06□□□□□ -0.16
FDPS-215ENST00000490140 APPBP2Q92624 585 aa14.06□□□□□ -0.16
FDPS-215ENST00000490140 TRIM43Q96BQ3 446 aaPredicted RBP14.06□□□□□ -0.16
FDPS-215ENST00000490140 GLT1D1Q96MS3 346 aa14.06□□□□□ -0.16
FDPS-215ENST00000490140 CDX2Q99626 313 aaPredicted RBP14.06□□□□□ -0.16
FDPS-215ENST00000490140 NACAP1Q9BZK3 213 aa14.06□□□□□ -0.16
FDPS-215ENST00000490140 PUS7LQ9H0K6 701 aaKnown RBP14.06□□□□□ -0.16
FDPS-215ENST00000490140 ZHX1Q9UKY1 873 aaPredicted RBP14.06□□□□□ -0.16
FDPS-215ENST00000490140 MYH4Q9Y623 1939 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 F5H6K3 240 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 DUSP11O75319 330 aaKnown RBP14.05□□□□□ -0.16
FDPS-215ENST00000490140 ZNF865P0CJ78 1059 aaPredicted RBP14.05□□□□□ -0.16
FDPS-215ENST00000490140 FOSL2P15408 326 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 RASA1P20936 1047 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 ACLYP53396 1101 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 KLRC3Q07444 240 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 DIEXFQ68CQ4 756 aaKnown RBP14.05□□□□□ -0.16
FDPS-215ENST00000490140 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.05□□□□□ -0.16
FDPS-215ENST00000490140 MIER1Q8N108 512 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 ANKRD35Q8N283 1001 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 CHST13Q8NET6 341 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 REPS2Q8NFH8 660 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 STRBPQ96SI9 672 aaKnown RBP14.05□□□□□ -0.16
FDPS-215ENST00000490140 SEMA6BQ9H3T3 888 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 ABHD16BQ9H3Z7 469 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 FEM1BQ9UK73 627 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 RCAN3Q9UKA8 241 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 SYNRGQ9UMZ2 1314 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 CDH23Q9H251 3354 aa14.05□□□□□ -0.16
FDPS-215ENST00000490140 EYSQ5T1H1 3165 aa14.04□□□□□ -0.16
FDPS-215ENST00000490140 MINDY4BA8MYZ0 360 aa14.04□□□□□ -0.16
FDPS-215ENST00000490140 ADAMTS4O75173 837 aa14.04□□□□□ -0.16
FDPS-215ENST00000490140 TTLL1O95922 423 aa14.04□□□□□ -0.16
FDPS-215ENST00000490140 NDUFB10O96000 172 aa14.04□□□□□ -0.16
FDPS-215ENST00000490140 APPP05067 770 aa14.04□□□□□ -0.16
FDPS-215ENST00000490140 CST5P28325 142 aaPredicted RBP14.04□□□□□ -0.16
FDPS-215ENST00000490140 PDE4BQ07343 736 aa14.04□□□□□ -0.16
FDPS-215ENST00000490140 SLFNL1Q499Z3 407 aa14.04□□□□□ -0.16
FDPS-215ENST00000490140 SH3RF1Q7Z6J0 888 aa14.04□□□□□ -0.16
FDPS-215ENST00000490140 COL25A1Q9BXS0 654 aaPredicted RBP14.04□□□□□ -0.16
FDPS-215ENST00000490140 ELP1O95163 1332 aa14.04□□□□□ -0.16
FDPS-215ENST00000490140 VCANP13611 3396 aa14.03□□□□□ -0.16
FDPS-215ENST00000490140 DNAJC25-GNG10A0A024R161 153 aa14.03□□□□□ -0.16
FDPS-215ENST00000490140 GSG1L2A8MUP6 293 aa14.03□□□□□ -0.16
FDPS-215ENST00000490140 TLR3O15455 904 aaKnown RBP14.03□□□□□ -0.16
FDPS-215ENST00000490140 RNF113AO15541 343 aaKnown RBP14.03□□□□□ -0.16
FDPS-215ENST00000490140 GPAA1O43292 621 aa14.03□□□□□ -0.16
FDPS-215ENST00000490140 C6orf222P0C671 652 aaPredicted RBP14.03□□□□□ -0.16
FDPS-215ENST00000490140 CPXCR1Q8N123 301 aa14.03□□□□□ -0.16
FDPS-215ENST00000490140 GMCL1P1Q8NEA9 526 aa14.03□□□□□ -0.16
FDPS-215ENST00000490140 SYMPKQ92797 1274 aaKnown RBP14.03□□□□□ -0.16
FDPS-215ENST00000490140 KIFC2Q96AC6 838 aa14.03□□□□□ -0.16
FDPS-215ENST00000490140 NUP88Q99567 741 aaPredicted RBP14.03□□□□□ -0.16
FDPS-215ENST00000490140 CLIP2Q9UDT6 1046 aa14.03□□□□□ -0.16
FDPS-215ENST00000490140 ISY1Q9ULR0 285 aaKnown RBP14.03□□□□□ -0.16
FDPS-215ENST00000490140 PRUNE2Q8WUY3 3088 aa14.03□□□□□ -0.16
FDPS-215ENST00000490140 PLIN4Q96Q06 1357 aa14.02□□□□□ -0.17
FDPS-215ENST00000490140 A0A0U1RQG5 324 aaPredicted RBP14.02□□□□□ -0.17
FDPS-215ENST00000490140 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.02□□□□□ -0.17
FDPS-215ENST00000490140 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.02□□□□□ -0.17
FDPS-215ENST00000490140 ERC2O15083 957 aa14.02□□□□□ -0.17
FDPS-215ENST00000490140 TSPY3P0CV98 308 aa14.02□□□□□ -0.17
FDPS-215ENST00000490140 TSPY8P0CW00 308 aa14.02□□□□□ -0.17
FDPS-215ENST00000490140 TAL1P17542 331 aaPredicted RBP14.02□□□□□ -0.17
FDPS-215ENST00000490140 SLC4A3P48751 1232 aa14.02□□□□□ -0.17
FDPS-215ENST00000490140 STAT2P52630 851 aa14.02□□□□□ -0.17
FDPS-215ENST00000490140 IKQ13123 557 aaPredicted RBP14.02□□□□□ -0.17
FDPS-215ENST00000490140 PPIGQ13427 754 aaKnown RBP eCLIP14.02□□□□□ -0.176e-48■□□□□ 9
FDPS-215ENST00000490140 ACVR2BQ13705 512 aa14.02□□□□□ -0.17
FDPS-215ENST00000490140 MKL1Q969V6 931 aa14.02□□□□□ -0.17
FDPS-215ENST00000490140 VTI1AQ96AJ9 217 aa14.02□□□□□ -0.17
FDPS-215ENST00000490140 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.02□□□□□ -0.17
FDPS-215ENST00000490140 SEZ6LQ9BYH1 1024 aa14.02□□□□□ -0.17
FDPS-215ENST00000490140 MTIF3Q9H2K0 278 aaKnown RBP14.02□□□□□ -0.17
FDPS-215ENST00000490140 SLC38A10Q9HBR0 1119 aa14.02□□□□□ -0.17
FDPS-215ENST00000490140 TTC28Q96AY4 2481 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 SMIM22K7EJ46 135 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 TIMP1P01033 207 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 FAAP100Q0VG06 881 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 KCNA10Q16322 511 aa14.01□□□□□ -0.17
FDPS-215ENST00000490140 PSRC1Q6PGN9 363 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms