RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 RRP1P56182 461 aaKnown RBP6.92□□□□□ -1.3
CNOT9-207ENST00000489687 DMTNQ08495 405 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L24Q0WX57 530 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 HS1BP3Q53T59 392 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 PLEKHH3Q7Z736 793 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 CERS3Q8IU89 383 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 NKX2-3Q8TAU0 364 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 SOCS4Q8WXH5 440 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 DDX12PQ92771 950 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 ATG4CQ96DT6 458 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 CRBNQ96SW2 442 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 SEC62Q99442 399 aaKnown RBP6.92□□□□□ -1.3
CNOT9-207ENST00000489687 NUP88Q99567 741 aaPredicted RBP6.92□□□□□ -1.3
CNOT9-207ENST00000489687 APBA2Q99767 749 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 NUDT12Q9BQG2 462 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 ECHDC1Q9NTX5 307 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 MCM3APO60318 1980 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 PRDM1O75626 825 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 FLOT1O75955 427 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 SYN1P17600 705 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 MAPK4P31152 587 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 CYP2C19P33261 490 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 RGS2P41220 211 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 CDK8P49336 464 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 MRE11P49959 708 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 USP14P54578 494 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 CACNB2Q08289 660 aaPredicted RBP6.91□□□□□ -1.3
CNOT9-207ENST00000489687 PLS1Q14651 629 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 MORN1Q5T089 497 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 MAP3K21Q5TCX8 1036 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 C12orf60Q5U649 245 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 ANO1Q5XXA6 986 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 CTR9Q6PD62 1173 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 TMEM92Q6UXU6 159 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 CATSPERGQ6ZRH7 1159 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 TMEM179Q6ZVK1 233 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 C16orf86Q6ZW13 317 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 RASGRP2Q7LDG7 609 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 SIAH1Q8IUQ4 282 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 NPLOC4Q8TAT6 608 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 USP6NLQ92738 828 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 OSBP2Q969R2 916 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 HTATIP2Q9BUP3 242 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 MOV10L1Q9BXT6 1211 aaKnown RBP6.91□□□□□ -1.3
CNOT9-207ENST00000489687 HMX1Q9NP08 348 aaPredicted RBP6.91□□□□□ -1.3
CNOT9-207ENST00000489687 GINM1Q9NU53 330 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 RABGAP1Q9Y3P9 1069 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 PFASO15067 1338 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 PLXNA1Q9UIW2 1896 aa6.91□□□□□ -1.3
CNOT9-207ENST00000489687 MINDY4BA8MYZ0 360 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 ESPNB1AK53 854 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.3
CNOT9-207ENST00000489687 TRIM66O15016 1216 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 GPAA1O43292 621 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 LETM1O95202 739 aaPredicted RBP6.9□□□□□ -1.3
CNOT9-207ENST00000489687 EEF2P13639 858 aaKnown RBP6.9□□□□□ -1.3
CNOT9-207ENST00000489687 ADORA2AP29274 412 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 TDO2P48775 406 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 PTGDRQ13258 359 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 GRB14Q14449 540 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 UBE3CQ15386 1083 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 AMHR2Q16671 573 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 FAM83BQ5T0W9 1011 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 CCDC129Q6ZRS4 1044 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 KBTBD3Q8NAB2 608 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 TRPV1Q8NER1 839 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 PI4K2BQ8TCG2 481 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 LENG1Q96BZ8 264 aaPredicted RBP6.9□□□□□ -1.3
CNOT9-207ENST00000489687 GPATCH3Q96I76 525 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 STRBPQ96SI9 672 aaKnown RBP6.9□□□□□ -1.3
CNOT9-207ENST00000489687 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.9□□□□□ -1.3
CNOT9-207ENST00000489687 DCTPP1Q9H773 170 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 ATP8A2Q9NTI2 1148 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 SWAP70Q9UH65 585 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 IVNS1ABPQ9Y6Y0 642 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 RPTORQ8N122 1335 aa6.9□□□□□ -1.3
CNOT9-207ENST00000489687 ZNFX1Q9P2E3 1918 aaKnown RBP6.89□□□□□ -1.31
CNOT9-207ENST00000489687 SMCHD1A6NHR9 2005 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 GSG1L2A8MUP6 293 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 RNF113AO15541 343 aaKnown RBP6.89□□□□□ -1.31
CNOT9-207ENST00000489687 IGSF3O75054 1194 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 OFD1O75665 1012 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 PGK2P07205 417 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 TAL1P17542 331 aaPredicted RBP6.89□□□□□ -1.31
CNOT9-207ENST00000489687 ERCC3P19447 782 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 RASA1P20936 1047 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 PTPREP23469 700 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 CNGA1P29973 690 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 CCNA1P78396 465 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 PDE4DQ08499 809 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 PPP4R3BQ5MIZ7 849 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 LBX2Q6XYB7 198 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 NECAB2Q7Z6G3 386 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 NCAPG2Q86XI2 1143 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 AMOTL1Q8IY63 956 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 LRRC47Q8N1G4 583 aaKnown RBP6.89□□□□□ -1.31
CNOT9-207ENST00000489687 GTF3C2Q8WUA4 911 aaPredicted RBP6.89□□□□□ -1.31
CNOT9-207ENST00000489687 APPBP2Q92624 585 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 FSD1Q9BTV5 496 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 SPATC1LQ9H0A9 340 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms