RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 PPP4R3BQ5MIZ7 849 aa23.89■■□□□ 1.41
CACFD1-205ENST00000489519 EVI5LQ96CN4 794 aa23.89■■□□□ 1.41
CACFD1-205ENST00000489519 PLXNA1Q9UIW2 1896 aa23.89■■□□□ 1.41
CACFD1-205ENST00000489519 PLIN4Q96Q06 1357 aa23.89■■□□□ 1.41
CACFD1-205ENST00000489519 TFAP4Q01664 338 aa23.88■■□□□ 1.41
CACFD1-205ENST00000489519 GPR153Q6NV75 609 aa23.88■■□□□ 1.41
CACFD1-205ENST00000489519 MSL3Q8N5Y2 521 aaKnown RBP23.88■■□□□ 1.41
CACFD1-205ENST00000489519 DDX11Q96FC9 970 aa23.88■■□□□ 1.41
CACFD1-205ENST00000489519 LRCH3Q96II8 777 aa23.88■■□□□ 1.41
CACFD1-205ENST00000489519 LBHD1Q9BQE6 289 aaPredicted RBP23.88■■□□□ 1.41
CACFD1-205ENST00000489519 PRKAG2Q9UGJ0 569 aa23.88■■□□□ 1.41
CACFD1-205ENST00000489519 MYCNP04198 464 aaPredicted RBP23.87■■□□□ 1.41
CACFD1-205ENST00000489519 FDX1P10109 184 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 RARBP10826 455 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 RTP1P59025 263 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 AAMPQ13685 434 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 LRRC41Q15345 812 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 FAM47AQ5JRC9 791 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 SLC39A5Q6ZMH5 540 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 TICAM2Q86XR7 235 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 CPXCR1Q8N123 301 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 KIFC2Q96AC6 838 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 SLC38A10Q9HBR0 1119 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 CNPY2Q9Y2B0 182 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 RIPK3Q9Y572 518 aa23.87■■□□□ 1.41
CACFD1-205ENST00000489519 BMP3P12645 472 aa23.86■■□□□ 1.41
CACFD1-205ENST00000489519 OAZ1P54368 228 aa23.86■■□□□ 1.41
CACFD1-205ENST00000489519 MDM2Q00987 491 aaPredicted RBP23.86■■□□□ 1.41
CACFD1-205ENST00000489519 SLFN13Q68D06 897 aa23.86■■□□□ 1.41
CACFD1-205ENST00000489519 LRRC47Q8N1G4 583 aaKnown RBP23.86■■□□□ 1.41
CACFD1-205ENST00000489519 XPNPEP3Q9NQH7 507 aa23.86■■□□□ 1.41
CACFD1-205ENST00000489519 DNAJC25-GNG10A0A024R161 153 aa23.85■■□□□ 1.41
CACFD1-205ENST00000489519 ADCYAP1R1P41586 468 aa23.85■■□□□ 1.41
CACFD1-205ENST00000489519 PDE1AP54750 535 aa23.85■■□□□ 1.41
CACFD1-205ENST00000489519 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.85■■□□□ 1.41
CACFD1-205ENST00000489519 HELLSQ9NRZ9 838 aa23.85■■□□□ 1.41
CACFD1-205ENST00000489519 FBXO40Q9UH90 709 aa23.85■■□□□ 1.41
CACFD1-205ENST00000489519 ZNF865P0CJ78 1059 aaPredicted RBP23.84■■□□□ 1.41
CACFD1-205ENST00000489519 AKR1A1P14550 325 aa23.84■■□□□ 1.41
CACFD1-205ENST00000489519 SLC4A3P48751 1232 aa23.84■■□□□ 1.41
CACFD1-205ENST00000489519 MAMDC4Q6UXC1 1216 aa23.84■■□□□ 1.41
CACFD1-205ENST00000489519 CCDC129Q6ZRS4 1044 aa23.84■■□□□ 1.41
CACFD1-205ENST00000489519 ZNF467Q7Z7K2 595 aaPredicted RBP23.84■■□□□ 1.41
CACFD1-205ENST00000489519 RNF180Q86T96 592 aa23.84■■□□□ 1.41
CACFD1-205ENST00000489519 CHST13Q8NET6 341 aa23.84■■□□□ 1.41
CACFD1-205ENST00000489519 CHURC1Q8WUH1 139 aa23.84■■□□□ 1.41
CACFD1-205ENST00000489519 GMCL1Q96IK5 515 aa23.84■■□□□ 1.41
CACFD1-205ENST00000489519 RAVER2Q9HCJ3 691 aaKnown RBP23.84■■□□□ 1.41
CACFD1-205ENST00000489519 ATP11BQ9Y2G3 1177 aa23.84■■□□□ 1.41
CACFD1-205ENST00000489519 SYNGAP1Q96PV0 1343 aa23.84■■□□□ 1.41
CACFD1-205ENST00000489519 TSPY2A6NKD2 308 aa23.83■■□□□ 1.41
CACFD1-205ENST00000489519 FOXP2O15409 715 aa23.83■■□□□ 1.41
CACFD1-205ENST00000489519 TAL1P17542 331 aaPredicted RBP23.83■■□□□ 1.41
CACFD1-205ENST00000489519 SNX17Q15036 470 aa23.83■■□□□ 1.41
CACFD1-205ENST00000489519 C1orf53Q5VUE5 145 aa23.83■■□□□ 1.41
CACFD1-205ENST00000489519 ANAPC4Q9UJX5 808 aa23.83■■□□□ 1.41
CACFD1-205ENST00000489519 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.83■■□□□ 1.41
CACFD1-205ENST00000489519 TMEM232C9JQI7 657 aa23.82■■□□□ 1.4
CACFD1-205ENST00000489519 STAT2P52630 851 aa23.82■■□□□ 1.4
CACFD1-205ENST00000489519 ALX1Q15699 326 aa23.82■■□□□ 1.4
CACFD1-205ENST00000489519 FAM160B2Q86V87 743 aa23.82■■□□□ 1.4
CACFD1-205ENST00000489519 ANKRD35Q8N283 1001 aa23.82■■□□□ 1.4
CACFD1-205ENST00000489519 FERMT2Q96AC1 680 aa23.82■■□□□ 1.4
CACFD1-205ENST00000489519 STX8Q9UNK0 236 aa23.82■■□□□ 1.4
CACFD1-205ENST00000489519 PHF24Q9UPV7 400 aa23.82■■□□□ 1.4
CACFD1-205ENST00000489519 PLA2G6O60733 806 aa23.81■■□□□ 1.4
CACFD1-205ENST00000489519 SLC1A4P43007 532 aa23.81■■□□□ 1.4
CACFD1-205ENST00000489519 CTDSPL2Q05D32 466 aa23.81■■□□□ 1.4
CACFD1-205ENST00000489519 STAG1Q8WVM7 1258 aa23.81■■□□□ 1.4
CACFD1-205ENST00000489519 FAM184BQ9ULE4 1060 aa23.81■■□□□ 1.4
CACFD1-205ENST00000489519 ISY1Q9ULR0 285 aaKnown RBP23.81■■□□□ 1.4
CACFD1-205ENST00000489519 SNAI1O95863 264 aaPredicted RBP23.8■■□□□ 1.4
CACFD1-205ENST00000489519 PGK1P00558 417 aa23.8■■□□□ 1.4
CACFD1-205ENST00000489519 MCCP23508 829 aa23.8■■□□□ 1.4
CACFD1-205ENST00000489519 MCMDC2Q4G0Z9 681 aa23.8■■□□□ 1.4
CACFD1-205ENST00000489519 VPS53Q5VIR6 699 aa23.8■■□□□ 1.4
CACFD1-205ENST00000489519 ORC4O43929 436 aa23.79■■□□□ 1.4
CACFD1-205ENST00000489519 RANBP6O60518 1105 aaKnown RBP23.79■■□□□ 1.4
CACFD1-205ENST00000489519 IKQ13123 557 aaPredicted RBP23.79■■□□□ 1.4
CACFD1-205ENST00000489519 TRIM60Q495X7 471 aa23.79■■□□□ 1.4
CACFD1-205ENST00000489519 RCSD1Q6JBY9 416 aa23.79■■□□□ 1.4
CACFD1-205ENST00000489519 TSEN34Q9BSV6 310 aaKnown RBP23.79■■□□□ 1.4
CACFD1-205ENST00000489519 IL17RBQ9NRM6 502 aa23.79■■□□□ 1.4
CACFD1-205ENST00000489519 FGRP09769 529 aa23.78■■□□□ 1.4
CACFD1-205ENST00000489519 DEFB123Q8N688 67 aa23.78■■□□□ 1.4
CACFD1-205ENST00000489519 ABHD16BQ9H3Z7 469 aa23.78■■□□□ 1.4
CACFD1-205ENST00000489519 RWDD1Q9H446 243 aaPredicted RBP23.78■■□□□ 1.4
CACFD1-205ENST00000489519 INCENPQ9NQS7 918 aa23.78■■□□□ 1.4
CACFD1-205ENST00000489519 FGAP02671 866 aa23.77■■□□□ 1.4
CACFD1-205ENST00000489519 ACVR2BQ13705 512 aa23.77■■□□□ 1.4
CACFD1-205ENST00000489519 TKFCQ3LXA3 575 aa23.77■■□□□ 1.4
CACFD1-205ENST00000489519 LNPKQ9C0E8 428 aa23.77■■□□□ 1.4
CACFD1-205ENST00000489519 ACAD9Q9H845 621 aa23.77■■□□□ 1.4
CACFD1-205ENST00000489519 PRDM5Q9NQX1 630 aaPredicted RBP23.77■■□□□ 1.4
CACFD1-205ENST00000489519 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.77■■□□□ 1.4
CACFD1-205ENST00000489519 ZHX1Q9UKY1 873 aaPredicted RBP23.77■■□□□ 1.4
CACFD1-205ENST00000489519 NMT2O60551 498 aa23.76■■□□□ 1.39
CACFD1-205ENST00000489519 ADAMTS4O75173 837 aa23.76■■□□□ 1.39
CACFD1-205ENST00000489519 DUSP11O75319 330 aaKnown RBP23.76■■□□□ 1.39
CACFD1-205ENST00000489519 NOVP48745 357 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms