RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 TRDNQ13061 729 aa14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 CCL14Q16627 93 aa14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 MORN1Q5T089 497 aa14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 SNRNP48Q6IEG0 339 aaKnown RBP14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 MB21D2Q8IYB1 491 aaPredicted RBP14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 PRPF38AQ8NAV1 312 aaKnown RBP14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 PNMA1Q8ND90 353 aa14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 SOCS4Q8WXH5 440 aa14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 NUDT12Q9BQG2 462 aa14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 CPVLQ9H3G5 476 aa14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 KAT14Q9H8E8 782 aa14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 GPHNQ9NQX3 736 aaPredicted RBP14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 BIN2Q9UBW5 565 aaPredicted RBP14.41□□□□□ -0.1
SMARCD3-213ENST00000489503 RBBP6Q7Z6E9 1792 aaKnown RBP14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 KIAA0100Q14667 2235 aaKnown RBP14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 POTEFA5A3E0 1075 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 INHAP05111 366 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 PTPREP23469 700 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 IRF5Q13568 498 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 NECTIN1Q15223 517 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 SEC23AQ15436 765 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 CCDC174Q6PII3 467 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 DGKHQ86XP1 1220 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 SLAIN1Q8ND83 568 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 SHCBP1Q8NEM2 672 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 NCOA7Q8NI08 942 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 TRIB2Q92519 343 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 USP6NLQ92738 828 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 TTC14Q96N46 770 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 SLC38A10Q9HBR0 1119 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 PRR12Q9ULL5 1215 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 RIPK3Q9Y572 518 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 IVNS1ABPQ9Y6Y0 642 aa14.4□□□□□ -0.1
SMARCD3-213ENST00000489503 IFIT3O14879 490 aaKnown RBP14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 ZBED4O75132 1171 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 ADORA2AP29274 412 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 STAT3P40763 770 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 ZNF543Q08ER8 600 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 MAP2K5Q13163 448 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 GRB14Q14449 540 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 IFIT1BQ5T764 474 aaKnown RBP14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 SYDE2Q5VT97 1194 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 FAM160B2Q86V87 743 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 RIOX2Q8IUF8 465 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 RASEFQ8IZ41 740 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 APBA2Q99767 749 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 TEX13BQ9BXU2 312 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 HOMER2Q9NSB8 354 aa14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 CTDP1Q9Y5B0 961 aaPredicted RBP14.39□□□□□ -0.11
SMARCD3-213ENST00000489503 SMCHD1A6NHR9 2005 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 SLC15A5A6NIM6 579 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 SNHG28P0DPA3 235 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 RGS2P41220 211 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 CCDC178Q5BJE1 867 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 TMEM67Q5HYA8 995 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 NBPF11Q86T75 865 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 NPLOC4Q8TAT6 608 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 CHURC1Q8WUH1 139 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 ANKS1AQ92625 1134 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 AGBL1Q96MI9 1066 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 LRRC2Q9BYS8 371 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 UNC93B1Q9H1C4 597 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 MROH8Q9H579 483 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 FLRT1Q9NZU1 646 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 CENPFP49454 3210 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 ZNF536O15090 1300 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 PLXNA1Q9UIW2 1896 aa14.38□□□□□ -0.11
SMARCD3-213ENST00000489503 ZNFX1Q9P2E3 1918 aaKnown RBP14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 PRC1O43663 620 aa14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 COBLO75128 1261 aa14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 HMGCRP04035 888 aa14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 PGK2P07205 417 aa14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 CCL5P13501 91 aa14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 ZKSCAN1P17029 563 aaPredicted RBP14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 NT5C2P49902 561 aa14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 PXYLP1Q8TE99 480 aa14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 TCEANC2Q96MN5 208 aa14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 MMP19Q99542 508 aa14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 UBA5Q9GZZ9 404 aa14.37□□□□□ -0.11
SMARCD3-213ENST00000489503 PLA2G6O60733 806 aa14.36□□□□□ -0.11
SMARCD3-213ENST00000489503 SLC25A27O95847 323 aa14.36□□□□□ -0.11
SMARCD3-213ENST00000489503 UBXN2AP68543 259 aa14.36□□□□□ -0.11
SMARCD3-213ENST00000489503 WTAPQ15007 396 aa14.36□□□□□ -0.11
SMARCD3-213ENST00000489503 ADCK5Q3MIX3 580 aa14.36□□□□□ -0.11
SMARCD3-213ENST00000489503 BTNL9Q6UXG8 535 aa14.36□□□□□ -0.11
SMARCD3-213ENST00000489503 RAB11FIP4Q86YS3 637 aa14.36□□□□□ -0.11
SMARCD3-213ENST00000489503 STAG2Q8N3U4 1231 aa14.36□□□□□ -0.11
SMARCD3-213ENST00000489503 MYL10Q9BUA6 226 aa14.36□□□□□ -0.11
SMARCD3-213ENST00000489503 RANBP17Q9H2T7 1088 aaKnown RBP14.36□□□□□ -0.11
SMARCD3-213ENST00000489503 ATP2A1O14983 1001 aa14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 FCER1AP12319 257 aa14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 ALAS1P13196 640 aa14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 PRKAR2AP13861 404 aaKnown RBP14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 CPA1P15085 419 aa14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 EN2P19622 333 aaPredicted RBP14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 RNF20Q5VTR2 975 aa14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 DPP9Q86TI2 863 aa14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 RNF208Q9H0X6 261 aa14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 LY9Q9HBG7 655 aa14.35□□□□□ -0.11
SMARCD3-213ENST00000489503 RNF146Q9NTX7 359 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms