RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 TMEM47Q9BQJ4 181 aa15.75■□□□□ 0.11
CCL28-202ENST00000489442 ZKSCAN3Q9BRR0 538 aa15.75■□□□□ 0.11
CCL28-202ENST00000489442 BRCA2P51587 3418 aa15.75■□□□□ 0.11
CCL28-202ENST00000489442 B4E1Z4 1266 aa15.74■□□□□ 0.11
CCL28-202ENST00000489442 FCER1AP12319 257 aa15.74■□□□□ 0.11
CCL28-202ENST00000489442 EN2P19622 333 aaPredicted RBP15.74■□□□□ 0.11
CCL28-202ENST00000489442 COPB2P35606 906 aa15.74■□□□□ 0.11
CCL28-202ENST00000489442 RCSD1Q6JBY9 416 aa15.74■□□□□ 0.11
CCL28-202ENST00000489442 KCTD1Q719H9 257 aa15.74■□□□□ 0.11
CCL28-202ENST00000489442 FAM160B2Q86V87 743 aa15.74■□□□□ 0.11
CCL28-202ENST00000489442 NKX2-3Q8TAU0 364 aa15.74■□□□□ 0.11
CCL28-202ENST00000489442 APBA2Q99767 749 aa15.74■□□□□ 0.11
CCL28-202ENST00000489442 UNC93B1Q9H1C4 597 aa15.74■□□□□ 0.11
CCL28-202ENST00000489442 SLC5A4Q9NY91 659 aa15.74■□□□□ 0.11
CCL28-202ENST00000489442 FDX1P10109 184 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 ADORA2AP29274 412 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 NOVP48745 357 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 GRB14Q14449 540 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 ERICH6BQ5W0A0 696 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 SNRNP48Q6IEG0 339 aaKnown RBP15.73■□□□□ 0.11
CCL28-202ENST00000489442 RIOX2Q8IUF8 465 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 DCAF4Q8WV16 495 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 TRIB2Q92519 343 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 USP6NLQ92738 828 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 ESYT1Q9BSJ8 1104 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 UBAC1Q9BSL1 405 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 TEX13BQ9BXU2 312 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 PPP4R2Q9NY27 417 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 ZSWIM5Q9P217 1185 aa15.73■□□□□ 0.11
CCL28-202ENST00000489442 ZNF214Q9UL59 606 aaPredicted RBP15.73■□□□□ 0.11
CCL28-202ENST00000489442 TNRC18O15417 2968 aaPredicted RBP15.73■□□□□ 0.11
CCL28-202ENST00000489442 GJB1P08034 283 aa15.72■□□□□ 0.11
CCL28-202ENST00000489442 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
CCL28-202ENST00000489442 KCTD2Q14681 263 aa15.72■□□□□ 0.11
CCL28-202ENST00000489442 RALYLQ86SE5 291 aaKnown RBP15.72■□□□□ 0.11
CCL28-202ENST00000489442 DGKHQ86XP1 1220 aa15.72■□□□□ 0.11
CCL28-202ENST00000489442 MAP4K1Q92918 833 aa15.72■□□□□ 0.11
CCL28-202ENST00000489442 ZSCAN10Q96SZ4 725 aaPredicted RBP15.72■□□□□ 0.11
CCL28-202ENST00000489442 MMP19Q99542 508 aa15.72■□□□□ 0.11
CCL28-202ENST00000489442 KAT14Q9H8E8 782 aa15.72■□□□□ 0.11
CCL28-202ENST00000489442 SLC38A10Q9HBR0 1119 aa15.72■□□□□ 0.11
CCL28-202ENST00000489442 HMX1Q9NP08 348 aaPredicted RBP15.72■□□□□ 0.11
CCL28-202ENST00000489442 CYP21A2P08686 494 aa15.71■□□□□ 0.11
CCL28-202ENST00000489442 TRIM32Q13049 653 aa15.71■□□□□ 0.11
CCL28-202ENST00000489442 CCL14Q16627 93 aa15.71■□□□□ 0.11
CCL28-202ENST00000489442 MFSD14CQ5VZR4 134 aa15.71■□□□□ 0.11
CCL28-202ENST00000489442 ABRAQ8N0Z2 381 aa15.71■□□□□ 0.11
CCL28-202ENST00000489442 REPS2Q8NFH8 660 aa15.71■□□□□ 0.11
CCL28-202ENST00000489442 RAVER2Q9HCJ3 691 aaKnown RBP15.71■□□□□ 0.11
CCL28-202ENST00000489442 GPCPD1Q9NPB8 672 aa15.71■□□□□ 0.11
CCL28-202ENST00000489442 ANO2Q9NQ90 1003 aa15.71■□□□□ 0.11
CCL28-202ENST00000489442 RBM8AQ9Y5S9 174 aaKnown RBP15.71■□□□□ 0.11
CCL28-202ENST00000489442 RPTORQ8N122 1335 aa15.71■□□□□ 0.11
CCL28-202ENST00000489442 PLA2G6O60733 806 aa15.7■□□□□ 0.1
CCL28-202ENST00000489442 CDC45O75419 566 aa15.7■□□□□ 0.1
CCL28-202ENST00000489442 TNKSO95271 1327 aa15.7■□□□□ 0.1
CCL28-202ENST00000489442 TFRCP02786 760 aaKnown RBP15.7■□□□□ 0.1
CCL28-202ENST00000489442 PRKAR2AP13861 404 aaKnown RBP15.7■□□□□ 0.1
CCL28-202ENST00000489442 FRMPD2Q68DX3 1309 aaPredicted RBP15.7■□□□□ 0.1
CCL28-202ENST00000489442 U2AF1L4Q8WU68 220 aaKnown RBP15.7■□□□□ 0.1
CCL28-202ENST00000489442 DEFB118Q96PH6 123 aa15.7■□□□□ 0.1
CCL28-202ENST00000489442 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCL28-202ENST00000489442 ERICH2A1L162 156 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 ATP2A1O14983 1001 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 HOXC6P09630 235 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 GJA8P48165 433 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 OAZ1P54368 228 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 RASGRP2Q7LDG7 609 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 PNMA1Q8ND90 353 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 NCOA7Q8NI08 942 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 NPLOC4Q8TAT6 608 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 DDX11Q96FC9 970 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 FBXO40Q9UH90 709 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 PRR12Q9ULL5 1215 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 PLXNA1Q9UIW2 1896 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 ZNF236Q9UL36 1845 aa15.69■□□□□ 0.1
CCL28-202ENST00000489442 E7EWF7 191 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 SGPL1O95470 568 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 PDHBP11177 359 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 SLC16A2P36021 539 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 CACNB2Q08289 660 aaPredicted RBP15.68■□□□□ 0.1
CCL28-202ENST00000489442 SART3Q15020 963 aaKnown RBP15.68■□□□□ 0.1
CCL28-202ENST00000489442 IFIT1BQ5T764 474 aaKnown RBP15.68■□□□□ 0.1
CCL28-202ENST00000489442 TTBK2Q6IQ55 1244 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 CCDC174Q6PII3 467 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 ENAHQ8N8S7 591 aaPredicted RBP15.68■□□□□ 0.1
CCL28-202ENST00000489442 LSG1Q9H089 658 aaKnown RBP15.68■□□□□ 0.1
CCL28-202ENST00000489442 PAK6Q9NQU5 681 aaPredicted RBP15.68■□□□□ 0.1
CCL28-202ENST00000489442 HOMER2Q9NSB8 354 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 FLRT1Q9NZU1 646 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 RIPK3Q9Y572 518 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 MKI67P46013 3256 aaKnown RBP15.68■□□□□ 0.1
CCL28-202ENST00000489442 IFIT3O14879 490 aaKnown RBP15.68■□□□□ 0.1
CCL28-202ENST00000489442 COBLO75128 1261 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 PGK2P07205 417 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 CNGA1P29973 690 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 CYP2C19P33261 490 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 SNAP25P60880 206 aa15.68■□□□□ 0.1
CCL28-202ENST00000489442 GPATCH4Q5T3I0 446 aaKnown RBP15.68■□□□□ 0.1
CCL28-202ENST00000489442 SYDE2Q5VT97 1194 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms