RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261		M0R2N6	131 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	STXBP3	O00186	592 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	CYTH3	O43739	400 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	PDHB	P11177	359 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	AKR1B1	P15121	316 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	ATP2B1	P20020	1258 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	SHMT1	P34896	483 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	DHX8	Q14562	1220 aa	Known RBP	12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	AOC3	Q16853	763 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	GPC2	Q8N158	579 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	LARGE2	Q8N3Y3	721 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	GLT8D2	Q9H1C3	349 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	KANSL2	Q9H9L4	492 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	RRAGD	Q9NQL2	400 aa	Predicted RBP	12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	DACH1	Q9UI36	760 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	SYNPO2	Q9UMS6	1093 aa		12.36	□□□□□ -0.43
ITSN1-231	ENST00000489261	CEP350	Q5VT06	3117 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	IKBKB	O14920	756 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	ZNF500	O60304	480 aa	Predicted RBP	12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	SMC2	O95347	1197 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	VIL1	P09327	827 aa	Known RBP	12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	LONP1	P36776	959 aa	Known RBP	12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	APLP1	P51693	650 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	PLCB2	Q00722	1185 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	ZNF174	Q15697	407 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	LONRF3	Q496Y0	759 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	NT5DC1	Q5TFE4	455 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	WWC2	Q6AWC2	1192 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	PPP1R18	Q6NYC8	613 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	TATDN1	Q6P1N9	297 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	PIK3AP1	Q6ZUJ8	805 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	TRIM5	Q9C035	493 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	CSRNP2	Q9H175	543 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	KCNQ5	Q9NR82	932 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	TMOD2	Q9NZR1	351 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	CLIP2	Q9UDT6	1046 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	PCDHA6	Q9UN73	950 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	PCDHA8	Q9Y5H6	950 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	SCN9A	Q15858	1988 aa		12.35	□□□□□ -0.43
ITSN1-231	ENST00000489261	ZNF646	O15015	1829 aa	Predicted RBP	12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	SMCO2	A6NFE2	343 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	USP17L5	A8MUK1	530 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	POLR2D	O15514	142 aa	Known RBP	12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	SLFN14	P0C7P3	912 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	PRPH	P41219	470 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	ZNF75D	P51815	510 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	NAPA	P54920	295 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	EIF6	P56537	245 aa	Known RBP	12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	MDM2	Q00987	491 aa	Predicted RBP	12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	ZNF543	Q08ER8	600 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	PTGDR	Q13258	359 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	SEMA3F	Q13275	785 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	CFAP100	Q494V2	611 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	CERKL	Q49MI3	558 aa	Predicted RBP	12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	EARS2	Q5JPH6	523 aa	Known RBP	12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	FKBP1C	Q5VVH2	108 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	USP17L2	Q6R6M4	530 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	C11orf57	Q6ZUT1	292 aa	Predicted RBP	12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	TMEM179	Q6ZVK1	233 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	HEATR3	Q7Z4Q2	680 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	PLA2G4D	Q86XP0	818 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	DHX40	Q8IX18	779 aa	Known RBP	12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	NIM1K	Q8IY84	436 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	AGBL3	Q8NEM8	1001 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	DCAF4	Q8WV16	495 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	MRFAP1L1	Q96HT8	127 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	FAM198A	Q9UFP1	575 aa		12.34	□□□□□ -0.43
ITSN1-231	ENST00000489261	ATRNL1	Q5VV63	1379 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	PNMA6F	A0A0J9YX94	578 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	TXLNA	P40222	546 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	SARS	P49591	514 aa	Known RBP	12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	NFIA	Q12857	509 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	POSTN	Q15063	836 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	NONO	Q15233	471 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	SLC35G1	Q2M3R5	365 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	MCTP2	Q6DN12	878 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	TEX2	Q8IWB9	1127 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	OGFOD1	Q8N543	542 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	IQUB	Q8NA54	791 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	MLKL	Q8NB16	471 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	MTMR14	Q8NCE2	650 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	HERC5	Q9UII4	1024 aa	Known RBP	12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	TRPM7	Q96QT4	1865 aa		12.33	□□□□□ -0.44
ITSN1-231	ENST00000489261	YDJC	A8MPS7	323 aa		12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	MPHOSPH10	O00566	681 aa	Known RBP	12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	AP5Z1	O43299	807 aa		12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	ACTN4	O43707	911 aa	Known RBP	12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	NEMF	O60524	1076 aa		12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	POTEI	P0CG38	1075 aa		12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	POTEJ	P0CG39	1038 aa		12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	GOLGA8H	P0CJ92	632 aa		12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	DTHD1	Q6ZMT9	781 aa		12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	C4orf32	Q8N8J7	132 aa		12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	PIBF1	Q8WXW3	757 aa		12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	SMARCE1	Q969G3	411 aa		12.32	□□□□□ -0.44
ITSN1-231	ENST00000489261	MTMR8	Q96EF0	704 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms