RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 C16orf86Q6ZW13 317 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 FAM83AQ86UY5 434 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 ZNF444Q8N0Y2 327 aaPredicted RBP14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 IDI2Q9BXS1 227 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 OSBPL5Q9H0X9 879 aaPredicted RBP14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 DHX36Q9H2U1 1008 aaKnown RBP14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 LY9Q9HBG7 655 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 SWAP70Q9UH65 585 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 FOCADQ5VW36 1801 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 CDK5RAP2Q96SN8 1893 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 PIEZO1Q92508 2521 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 CXCL11O14625 94 aa14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 ZBTB43O43298 467 aa14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 ENTPD3O75355 529 aa14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 PRDM1O75626 825 aa14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 GJB2P29033 226 aa14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 SCRN1Q12765 414 aa14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 SMCR8Q8TEV9 937 aaPredicted RBP14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 ZSCAN10Q96SZ4 725 aaPredicted RBP14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 GPHNQ9NQX3 736 aaPredicted RBP14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 ZNF112Q9UJU3 913 aa14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 SLC12A7Q9Y666 1083 aa14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 TNKSO95271 1327 aa14.04□□□□□ -0.16
HLA-DOB-209ENST00000488325 MYH1P12882 1939 aa14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 CPLX1O14810 134 aa14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 CDKL5O76039 1030 aa14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 CDK8P49336 464 aa14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 METAP2P50579 478 aaKnown RBP eCLIP14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 PLCD1P51178 756 aa14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 CCT2P78371 535 aaKnown RBP14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 SHHQ15465 462 aa14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 NOL9Q5SY16 702 aaKnown RBP14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 IFIT1BQ5T764 474 aaKnown RBP14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 APOA5Q6Q788 366 aa14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 DYNLL2Q96FJ2 89 aa14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 GBP4Q96PP9 640 aa14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 EHD4Q9H223 541 aa14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 DDX4Q9NQI0 724 aaKnown RBP14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 BRPF3Q9ULD4 1205 aa14.03□□□□□ -0.16
HLA-DOB-209ENST00000488325 NID2Q14112 1375 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 CCDC196A0A1B0GTZ2 297 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 GOLGA8AA7E2F4 631 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 SMIM22K7EJ46 135 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 TSPY3P0CV98 308 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 TSPY8P0CW00 308 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 SMAD3P84022 425 aaKnown RBP14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 TFAP4Q01664 338 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 PPP2R5BQ15173 497 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 SEC23AQ15436 765 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 FKBP1CQ5VVH2 108 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 GADL1Q6ZQY3 521 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 FASTKD5Q7L8L6 764 aaKnown RBP14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 ANKRD13CQ8N6S4 541 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 FAM184AQ8NB25 1140 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 SMARCC2Q8TAQ2 1214 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 ZKSCAN3Q9BRR0 538 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 TCP11L1Q9NUJ3 509 aa14.02□□□□□ -0.17
HLA-DOB-209ENST00000488325 A0A0G2JLL6 359 aaPredicted RBP14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 BRD1O95696 1058 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 CALM1P0DP23 149 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 CALM2P0DP24 149 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 CALM3P0DP25 149 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 RASA1P20936 1047 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 EVX2Q03828 476 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 NFIAQ12857 509 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 C9orf50Q5SZB4 431 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 PRRT2Q7Z6L0 340 aaPredicted RBP14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 CATIPQ7Z7H3 387 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 MICU3Q86XE3 530 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 ZNF654Q8IZM8 581 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 ENAHQ8N8S7 591 aaPredicted RBP14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 NSUN7Q8NE18 718 aaKnown RBP14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 ADAMTS19Q8TE59 1207 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 TRIM34Q9BYJ4 488 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 SERPINB13Q9UIV8 391 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 SLC45A1Q9Y2W3 748 aa14.01□□□□□ -0.17
HLA-DOB-209ENST00000488325 PTPDC1A2A3K4 754 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 STX6O43752 255 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 DDAH1O94760 285 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 GABPAQ06546 454 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 FAM47AQ5JRC9 791 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 PPP4R3BQ5MIZ7 849 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 MAP3K21Q5TCX8 1036 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 LARP1BQ659C4 914 aaKnown RBP14□□□□□ -0.17
HLA-DOB-209ENST00000488325 DGKHQ86XP1 1220 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 FOXP4Q8IVH2 680 aaPredicted RBP14□□□□□ -0.17
HLA-DOB-209ENST00000488325 ZSCAN29Q8IWY8 852 aaPredicted RBP14□□□□□ -0.17
HLA-DOB-209ENST00000488325 CRACR2BQ8N4Y2 399 aaPredicted RBP14□□□□□ -0.17
HLA-DOB-209ENST00000488325 NEDD1Q8NHV4 660 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 TRIB2Q92519 343 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 TNPO1Q92973 898 aaKnown RBP14□□□□□ -0.17
HLA-DOB-209ENST00000488325 UHRF1Q96T88 793 aaPredicted RBP14□□□□□ -0.17
HLA-DOB-209ENST00000488325 NCOA5Q9HCD5 579 aaKnown RBP14□□□□□ -0.17
HLA-DOB-209ENST00000488325 PI4KBQ9UBF8 816 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 FAM198AQ9UFP1 575 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 GJD2Q9UKL4 321 aa14□□□□□ -0.17
HLA-DOB-209ENST00000488325 ARIH1Q9Y4X5 557 aaPredicted RBP14□□□□□ -0.17
HLA-DOB-209ENST00000488325 ATRNL1Q5VV63 1379 aa13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 PRKAR2AP13861 404 aaKnown RBP13.99□□□□□ -0.17
HLA-DOB-209ENST00000488325 PTMSP20962 102 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms