RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 SZT2Q5T011 3432 aa13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 TSPY2A6NKD2 308 aa13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 RANBP6O60518 1105 aaKnown RBP13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 NMT2O60551 498 aa13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 COL6A1P12109 1028 aa13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 NMIQ13287 307 aaPredicted RBP13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 LRRC26Q2I0M4 334 aa13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 RRP12Q5JTH9 1297 aaKnown RBP13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 SMC5Q8IY18 1101 aa13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 ABRAQ8N0Z2 381 aa13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 PRPF38AQ8NAV1 312 aaKnown RBP13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 MKL1Q969V6 931 aa13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 RAVER2Q9HCJ3 691 aaKnown RBP13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 HELLSQ9NRZ9 838 aa13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 TOMM22Q9NS69 142 aa13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 STX8Q9UNK0 236 aa13.42□□□□□ -0.26
NIPAL3-207ENST00000488155 MYO9BQ13459 2157 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 TMEM232C9JQI7 657 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 MSCO60682 206 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 ZBED4O75132 1171 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 IGHA2P01877 340 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 BMP3P12645 472 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 MCCP23508 829 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 HAND2P61296 217 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 IKQ13123 557 aaPredicted RBP13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 MCMDC2Q4G0Z9 681 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 RASGRP2Q7LDG7 609 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 TEX13BQ9BXU2 312 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 PRO3102Q9H379 93 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 FEM1BQ9UK73 627 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 SUPT16HQ9Y5B9 1047 aaKnown RBP13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 PLIN4Q96Q06 1357 aa13.41□□□□□ -0.26
NIPAL3-207ENST00000488155 SEPT4O43236 478 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 FGAP02671 866 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 TAL1P17542 331 aaPredicted RBP13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 SNAP25P60880 206 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 IRX6P78412 446 aaPredicted RBP13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 ZNF792Q3KQV3 632 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 KCTD1Q719H9 257 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 ZNF589Q86UQ0 364 aaPredicted RBP13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 CHD1LQ86WJ1 897 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 PLEKHM2Q8IWE5 1019 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 GMCL1P1Q8NEA9 526 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 DDX11Q96FC9 970 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 TINF2Q9BSI4 451 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 IL17RBQ9NRM6 502 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 HOMER2Q9NSB8 354 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 LCTP09848 1927 aa13.4□□□□□ -0.26
NIPAL3-207ENST00000488155 LAMA4Q16363 1823 aa13.39□□□□□ -0.27
NIPAL3-207ENST00000488155 HSPD1P10809 573 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-207ENST00000488155 COPB2P35606 906 aa13.39□□□□□ -0.27
NIPAL3-207ENST00000488155 SLC1A4P43007 532 aa13.39□□□□□ -0.27
NIPAL3-207ENST00000488155 MAGEA10P43363 369 aaPredicted RBP13.39□□□□□ -0.27
NIPAL3-207ENST00000488155 AAMPQ13685 434 aa13.39□□□□□ -0.27
NIPAL3-207ENST00000488155 FERMT2Q96AC1 680 aa13.39□□□□□ -0.27
NIPAL3-207ENST00000488155 SLC38A10Q9HBR0 1119 aa13.39□□□□□ -0.27
NIPAL3-207ENST00000488155 BAZ2BQ9UIF8 2168 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-207ENST00000488155 KBTBD13C9JR72 458 aa13.38□□□□□ -0.27
NIPAL3-207ENST00000488155 DNM1LO00429 736 aa13.38□□□□□ -0.27
NIPAL3-207ENST00000488155 MDM2Q00987 491 aaPredicted RBP13.38□□□□□ -0.27
NIPAL3-207ENST00000488155 ALX1Q15699 326 aa13.38□□□□□ -0.27
NIPAL3-207ENST00000488155 CCDC174Q6PII3 467 aa13.38□□□□□ -0.27
NIPAL3-207ENST00000488155 ANKRD35Q8N283 1001 aa13.38□□□□□ -0.27
NIPAL3-207ENST00000488155 ARRDC4Q8NCT1 418 aa13.38□□□□□ -0.27
NIPAL3-207ENST00000488155 LENG1Q96BZ8 264 aaPredicted RBP13.38□□□□□ -0.27
NIPAL3-207ENST00000488155 GDF15Q99988 308 aa13.38□□□□□ -0.27
NIPAL3-207ENST00000488155 CCDC171Q6TFL3 1326 aa13.38□□□□□ -0.27
NIPAL3-207ENST00000488155 LTBP2Q14767 1821 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 SOX1O00570 391 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 PGK1P00558 417 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 SDSP20132 328 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 STAT2P52630 851 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 RTP1P59025 263 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 NUCB1Q02818 461 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 LRRC41Q15345 812 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 CWC27Q6UX04 472 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 CHURC1Q8WUH1 139 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 STAG1Q8WVM7 1258 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 AGBL1Q96MI9 1066 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 ANAPC4Q9UJX5 808 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 ZHX1Q9UKY1 873 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 ATP11BQ9Y2G3 1177 aa13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 DIS3Q9Y2L1 958 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-207ENST00000488155 ORC4O43929 436 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 ZNF865P0CJ78 1059 aaPredicted RBP13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 RARBP10826 455 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 ALAS1P13196 640 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 ADCYAP1R1P41586 468 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 CCDC96Q2M329 555 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 TTBK2Q6IQ55 1244 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 RCSD1Q6JBY9 416 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 FAM160B2Q86V87 743 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 LRCH3Q96II8 777 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 UBE2OQ9C0C9 1292 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 XPNPEP3Q9NQH7 507 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 CNPY2Q9Y2B0 182 aa13.36□□□□□ -0.27
NIPAL3-207ENST00000488155 LAMA3Q16787 3333 aa13.35□□□□□ -0.27
NIPAL3-207ENST00000488155 ATP2A1O14983 1001 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms