RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 EMILIN3Q9NT22 766 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 ORC3Q9UBD5 711 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-242ENST00000488013 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-242ENST00000488013 MTMR7Q9Y216 660 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 SLC45A1Q9Y2W3 748 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 MYPNQ86TC9 1320 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 PAPPA2Q9BXP8 1791 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 TMEM232C9JQI7 657 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 HOXA7P31268 230 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-242ENST00000488013 ZNF157P51786 506 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-242ENST00000488013 HMGCS2P54868 508 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 FUT2Q10981 343 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 TRIM29Q14134 588 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 FAM83BQ5T0W9 1011 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 SPRYD7Q5W111 196 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 SPICE1Q8N0Z3 855 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 SLF1Q9BQI6 1058 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 SLC26A6Q9BXS9 759 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 PNMA3Q9UL41 463 aa12.78□□□□□ -0.36
HDLBP-242ENST00000488013 ABT1Q9ULW3 272 aaKnown RBP12.78□□□□□ -0.36
HDLBP-242ENST00000488013 SIPA1L1O43166 1804 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 MANSC4A6NHS7 340 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-242ENST00000488013 CTDNEP1O95476 244 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 GOLGA8HP0CJ92 632 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 OSBPP22059 807 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 APLP1P51693 650 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 NUCB2P80303 420 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 FMR1Q06787 632 aaKnown RBP eCLIP12.77□□□□□ -0.375e-9■■■□□ 14.7
HDLBP-242ENST00000488013 COG2Q14746 738 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 ZYXQ15942 572 aaKnown RBP12.77□□□□□ -0.37
HDLBP-242ENST00000488013 SYDE2Q5VT97 1194 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 KCTD1Q719H9 257 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 CCDC84Q86UT8 332 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-242ENST00000488013 RAB11FIP4Q86YS3 637 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 STAG2Q8N3U4 1231 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.37
HDLBP-242ENST00000488013 MB21D1Q8N884 522 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 TANGO6Q9C0B7 1094 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 GLT8D2Q9H1C3 349 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 RPAP3Q9H6T3 665 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-242ENST00000488013 ZCCHC17Q9NP64 241 aaKnown RBP12.77□□□□□ -0.37
HDLBP-242ENST00000488013 SH3GLB2Q9NR46 395 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 AGTPBP1Q9UPW5 1226 aa12.77□□□□□ -0.37
HDLBP-242ENST00000488013 CTDP1Q9Y5B0 961 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-242ENST00000488013 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-242ENST00000488013 FRMPD2Q68DX3 1309 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-242ENST00000488013 PNMA6FA0A0J9YX94 578 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 ZBTB5O15062 677 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 FLOT1O75955 427 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 PLEKHA8P1O95397 391 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 GJB2P29033 226 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 ST3GAL1Q11201 340 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 PFKFB3Q16875 520 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-242ENST00000488013 LARP1BQ659C4 914 aaKnown RBP12.76□□□□□ -0.37
HDLBP-242ENST00000488013 OTUD7BQ6GQQ9 843 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 GALNT17Q6IS24 598 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 CATSPERGQ6ZRH7 1159 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 NBPF11Q86T75 865 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 ADGRF4Q8IZF3 695 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 CCDC148Q8NFR7 591 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 MTMR8Q96EF0 704 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 MAF1Q9H063 256 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-242ENST00000488013 PPP1R9AQ9ULJ8 1098 aa12.76□□□□□ -0.37
HDLBP-242ENST00000488013 H3BQV1 296 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 ZBED4O75132 1171 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 SCG2P13521 617 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 CALML3P27482 149 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 OAZ1P54368 228 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 IRX3P78415 501 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-242ENST00000488013 SREBF2Q12772 1141 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 SAFBQ15424 915 aaKnown RBP eCLIP12.75□□□□□ -0.37
HDLBP-242ENST00000488013 PPP1R18Q6NYC8 613 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 GADL1Q6ZQY3 521 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 ANKRD23Q86SG2 305 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 CCDC82Q8N4S0 544 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 CNTNAP5Q8WYK1 1306 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 PHKBQ93100 1093 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 DDX11Q96FC9 970 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 C8orf76Q96K31 380 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 ALG1Q9BT22 464 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 UBA5Q9GZZ9 404 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 JMJD4Q9H9V9 463 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 BRMS1Q9HCU9 246 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 PRR12Q9ULL5 1215 aa12.75□□□□□ -0.37
HDLBP-242ENST00000488013 CCL15-CCL14A0A0B4J2E2 113 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 TESPA1A2RU30 521 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-242ENST00000488013 CYTH3O43739 400 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 JAK2O60674 1132 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 SLC10A3P09131 477 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 GNA11P29992 359 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 NOGQ13253 232 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 CCL15Q16663 113 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 MCTP2Q6DN12 878 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 TTBK2Q6IQ55 1244 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 RASAL3Q86YV0 1011 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 KIFC2Q96AC6 838 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms