RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 CCDC84Q86UT8 332 aaPredicted RBP13.19□□□□□ -0.3
TRA2B-214ENST00000487615 SUPT20HQ8NEM7 779 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 OR8K1Q8NGG5 319 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 AK8Q96MA6 479 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 SLF1Q9BQI6 1058 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 AGXT2Q9BYV1 514 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 STK32BQ9NY57 414 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 ADRA2BP18089 450 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 INTS5Q6P9B9 1019 aaKnown RBP13.19□□□□□ -0.3
TRA2B-214ENST00000487615 VSTM4Q8IW00 320 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 JDP2Q8WYK2 163 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 NSUN4Q96CB9 384 aaKnown RBP13.19□□□□□ -0.3
TRA2B-214ENST00000487615 PPP1R13BQ96KQ4 1090 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 CCDC17Q96LX7 622 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 CETN3O15182 167 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 ORC4O43929 436 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 NMT2O60551 498 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 KRT13P13646 458 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 CDC25AP30304 524 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 GUCY1A2P33402 732 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 CDK8P49336 464 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 DNM2P50570 870 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 PFKFB3Q16875 520 aaPredicted RBP13.19□□□□□ -0.3
TRA2B-214ENST00000487615 GPATCH4Q5T3I0 446 aaKnown RBP13.19□□□□□ -0.3
TRA2B-214ENST00000487615 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 CAPZA3Q96KX2 299 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 TSGA10Q9BZW7 698 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 SWAP70Q9UH65 585 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 RDXP35241 583 aaKnown RBP13.19□□□□□ -0.3
TRA2B-214ENST00000487615 ARID5BQ14865 1188 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 USH1GQ495M9 461 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 RC3H1Q5TC82 1133 aaKnown RBP13.19□□□□□ -0.3
TRA2B-214ENST00000487615 USP17L2Q6R6M4 530 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 PAGE5Q96GU1 130 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
TRA2B-214ENST00000487615 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
TRA2B-214ENST00000487615 PCDHA12Q9UN75 941 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 SPATA31A5Q5VU36 1347 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 SPATA31A7Q8IWB4 1347 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 MACROD2A1Z1Q3 448 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 RHOXF2BP0C7M4 288 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 CHMP4BP1P59074 171 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 CERKLQ49MI3 558 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-214ENST00000487615 NCAPH2Q6IBW4 605 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 RHOXF2Q9BQY4 288 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 CD209Q9NNX6 404 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 TOPAZ1Q8N9V7 1692 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 TTLL1O95922 423 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 IQCB1Q15051 598 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 SENP2Q9HC62 589 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 SH3GLB2Q9NR46 395 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 KDM3AQ9Y4C1 1321 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 COPB1P53618 953 aaKnown RBP13.18□□□□□ -0.3
TRA2B-214ENST00000487615 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 TBC1D5Q92609 795 aa13.18□□□□□ -0.3
TRA2B-214ENST00000487615 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 SETQ01105 290 aaPredicted RBP13.17□□□□□ -0.3
TRA2B-214ENST00000487615 HLTFQ14527 1009 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRA2B-214ENST00000487615 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 LARGE2Q8N3Y3 721 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 UIMC1Q96RL1 719 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 PIGSQ96S52 555 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 DNM3Q9UQ16 869 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 STK24Q9Y6E0 443 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 BCL9O00512 1426 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 hCG_1984214I3L0E3 225 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 PPIP5K2O43314 1243 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 PTPN21Q16825 1174 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 CCDC144BQ3MJ40 725 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 PPP4R3AQ6IN85 833 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 C2CD5Q86YS7 1000 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 DHX40Q8IX18 779 aaKnown RBP13.17□□□□□ -0.3
TRA2B-214ENST00000487615 ZNF713Q8N859 430 aaPredicted RBP13.17□□□□□ -0.3
TRA2B-214ENST00000487615 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 MYL1P05976 194 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 FGFR2P21802 821 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 ICA1Q05084 483 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 RAPGEF1Q13905 1077 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 DCAF17Q5H9S7 520 aaPredicted RBP13.17□□□□□ -0.3
TRA2B-214ENST00000487615 ZNF658Q5TYW1 1059 aaPredicted RBP13.17□□□□□ -0.3
TRA2B-214ENST00000487615 TBCKQ8TEA7 893 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 IQCDQ96DY2 449 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 NFIXQ14938 502 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 VPS72Q15906 364 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 KRT27Q7Z3Y8 459 aa13.17□□□□□ -0.3
TRA2B-214ENST00000487615 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRA2B-214ENST00000487615 GOLGA8FQ08AF8 430 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 RAD51AP2Q09MP3 1159 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 GOLGA8DPQ0D2H9 430 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 MCTP2Q6DN12 878 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 TMEM47Q9BQJ4 181 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 COA1Q9GZY4 146 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 SPTLC3Q9NUV7 552 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 TBC1D7Q9P0N9 293 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 ERCC3P19447 782 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 CASP14P31944 242 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 ZYXQ15942 572 aaKnown RBP13.16□□□□□ -0.3
TRA2B-214ENST00000487615 ERCC6LQ2NKX8 1250 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms