RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 CNOT7Q9UIV1 285 aaKnown RBP8.1□□□□□ -1.11
SF3A3-206ENST00000487062 SYNPO2Q9UMS6 1093 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 BAZ2BQ9UIF8 2168 aaKnown RBP8.1□□□□□ -1.11
SF3A3-206ENST00000487062 A0A1W2PQ27 194 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 A0A1W2PQ64 194 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 A0A1W2PQD8 194 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 hCG_1642624A0A1W2PR95 340 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 FAM196BA6NMK8 535 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 USP17L5A8MUK1 530 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 PPP6R2O75170 966 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 GDF11O95390 407 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 BMP15O95972 392 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 GOLGA8HP0CJ92 632 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 EEF2P13639 858 aaKnown RBP8.09□□□□□ -1.11
SF3A3-206ENST00000487062 ZNF543Q08ER8 600 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 SEPT2Q15019 361 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 SLC39A14Q15043 492 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 KIF4BQ2VIQ3 1234 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 LRSAM1Q6UWE0 723 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 GPC2Q8N158 579 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 PIBF1Q8WXW3 757 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 HOOK2Q96ED9 719 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 PGBD1Q96JS3 809 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 RIOX1Q9H6W3 641 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 SH2D4AQ9H788 454 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 CLIC4Q9Y696 253 aa8.09□□□□□ -1.11
SF3A3-206ENST00000487062 CYTH3O43739 400 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 CUTAO60888 179 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 GH2P01242 217 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 GNA11P29992 359 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 SLC1A4P43007 532 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 TRAPPC10P48553 1259 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 MRE11P49959 708 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 NAPAP54920 295 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 MAP3K10Q02779 954 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 NR5A1Q13285 461 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 RASA3Q14644 834 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 SLFN13Q68D06 897 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 HEATR3Q7Z4Q2 680 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 CLEC10AQ8IUN9 316 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 APOBEC3FQ8IUX4 373 aaKnown RBP8.08□□□□□ -1.12
SF3A3-206ENST00000487062 CCAR1Q8IX12 1150 aaKnown RBP8.08□□□□□ -1.12
SF3A3-206ENST00000487062 BLIDQ8IZY5 108 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 DAGLBQ8NCG7 672 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 MRPS27Q92552 414 aaKnown RBP8.08□□□□□ -1.12
SF3A3-206ENST00000487062 KIF12Q96FN5 646 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 SYT17Q9BSW7 474 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 FTOQ9C0B1 505 aaKnown RBP eCLIP8.08□□□□□ -1.12
SF3A3-206ENST00000487062 TMEM39BQ9GZU3 492 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 NUP62CLQ9H1M0 184 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 VAT1LQ9HCJ6 419 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 C6orf50Q9HD87 102 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 GPCPD1Q9NPB8 672 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 GINM1Q9NU53 330 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 BARHL2Q9NY43 387 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 PCDHA7Q9UN72 937 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 PCDHA4Q9UN74 947 aa8.08□□□□□ -1.12
SF3A3-206ENST00000487062 FRMPD2Q68DX3 1309 aaPredicted RBP8.07□□□□□ -1.12
SF3A3-206ENST00000487062 ZNF541Q9H0D2 1346 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 PNMA6FA0A0J9YX94 578 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 CCDC194A0A1B0GVG4 234 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 SHTN1A0MZ66 631 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 SYCE3A1L190 88 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 FSD2A1L4K1 749 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 TRIM75PA6NK02 468 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 STXBP3O00186 592 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 CTAGE5O15320 804 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 MAP3K13O43283 966 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 RAD21O60216 631 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 KINO60870 393 aaKnown RBP8.07□□□□□ -1.12
SF3A3-206ENST00000487062 ASNSP08243 561 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 SLURP2P0DP57 97 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 LIG1P18858 919 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 PRELPP51888 382 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 FAM160A1Q05DH4 1040 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 TBC1D10BQ4KMP7 808 aaPredicted RBP8.07□□□□□ -1.12
SF3A3-206ENST00000487062 DCAF15Q66K64 600 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 WWC2Q6AWC2 1192 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 PPP1R18Q6NYC8 613 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 SAMD7Q7Z3H4 446 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 HOMER1Q86YM7 354 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 FSIP1Q8NA03 581 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 GMCL1P1Q8NEA9 526 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 OXER1Q8TDS5 423 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 GPKOWQ92917 476 aaPredicted RBP eCLIP8.07□□□□□ -1.12
SF3A3-206ENST00000487062 GMCL1Q96IK5 515 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 PIGSQ96S52 555 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 ARID3AQ99856 593 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 UBA5Q9GZZ9 404 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 TNMDQ9H2S6 317 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 GOPCQ9HD26 462 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.07□□□□□ -1.12
SF3A3-206ENST00000487062 DACT1Q9NYF0 836 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 GPRC5DQ9NZD1 345 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 HACL1Q9UJ83 578 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 ZBTB21Q9ULJ3 1066 aa8.07□□□□□ -1.12
SF3A3-206ENST00000487062 MORC2Q9Y6X9 1032 aaPredicted RBP8.07□□□□□ -1.12
SF3A3-206ENST00000487062 ESYT2A0FGR8 921 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 SMCO2A6NFE2 343 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 F5H6K3 240 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms