RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 PODNQ7Z5L7 613 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 DEPDC4Q8N2C3 294 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 PNMA1Q8ND90 353 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 C7orf43Q8WVR3 580 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 DYNLL2Q96FJ2 89 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 MXD3Q9BW11 206 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 SLC26A6Q9BXS9 759 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 DBNDD1Q9H9R9 158 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 GRPEL1Q9HAV7 217 aa8.38□□□□□ -1.07
TMC1-204ENST00000486417 SAP30BPQ9UHR5 308 aaKnown RBP8.38□□□□□ -1.07
TMC1-204ENST00000486417 CCDC196A0A1B0GTZ2 297 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 SYCE3A1L190 88 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 TSPY2A6NKD2 308 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 KIF28PB7ZC32 967 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 F8W031 263 aaPredicted RBP8.37□□□□□ -1.07
TMC1-204ENST00000486417 POLR3DP05423 398 aaPredicted RBP8.37□□□□□ -1.07
TMC1-204ENST00000486417 MRE11P49959 708 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 FKBP1AP62942 108 aaKnown RBP8.37□□□□□ -1.07
TMC1-204ENST00000486417 KIF23Q02241 960 aaPredicted RBP8.37□□□□□ -1.07
TMC1-204ENST00000486417 PPP2R5BQ15173 497 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 CCDC183Q5T5S1 534 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 ATL3Q6DD88 541 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 CC2D2BQ6DHV5 1058 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 LRSAM1Q6UWE0 723 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 CATIPQ7Z7H3 387 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 NBPF11Q86T75 865 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 FANCBQ8NB91 859 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 NUP133Q8WUM0 1156 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 ZNF396Q96N95 335 aaPredicted RBP8.37□□□□□ -1.07
TMC1-204ENST00000486417 AIFM3Q96NN9 605 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 UNC93B1Q9H1C4 597 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 GJB4Q9NTQ9 266 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 RBM28Q9NW13 759 aaKnown RBP8.37□□□□□ -1.07
TMC1-204ENST00000486417 CFAP45Q9UL16 551 aa8.37□□□□□ -1.07
TMC1-204ENST00000486417 TTF2Q9UNY4 1162 aaKnown RBP8.37□□□□□ -1.07
TMC1-204ENST00000486417 COL4A5P29400 1685 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 NMT2O60551 498 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 DEXIO95424 95 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 CALM1P0DP23 149 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 CALM2P0DP24 149 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 CALM3P0DP25 149 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 XRCC6P12956 609 aaKnown RBP eCLIP8.36□□□□□ -1.07
TMC1-204ENST00000486417 PLCD1P51178 756 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 TFAP4Q01664 338 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 KRT40Q6A162 431 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 C16orf86Q6ZW13 317 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 BRAPQ7Z569 592 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 TRIM22Q8IYM9 498 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 SLC44A5Q8NCS7 719 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 SUPT20HQ8NEM7 779 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 WASF1Q92558 559 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 USP28Q96RU2 1077 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 RNF26Q9BY78 433 aaPredicted RBP8.36□□□□□ -1.07
TMC1-204ENST00000486417 FTOQ9C0B1 505 aaKnown RBP eCLIP8.36□□□□□ -1.07
TMC1-204ENST00000486417 IVNS1ABPQ9Y6Y0 642 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 CNTNAP5Q8WYK1 1306 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 FER1L6Q2WGJ9 1857 aa8.36□□□□□ -1.07
TMC1-204ENST00000486417 UBE2Q2LH0YL09 131 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 C21orf2O43822 256 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 PLEKHA8P1O95397 391 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 RASA1P20936 1047 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 GUCY1A2P33402 732 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 SCNN1DP51172 638 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 KIAA2012Q0VF49 1180 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 TROAPQ12815 778 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 TRIM29Q14134 588 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 AOC3Q16853 763 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 CCDC93Q567U6 631 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 CCDC178Q5BJE1 867 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 DACT2Q5SW24 774 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 STRIP1Q5VSL9 837 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 RCSD1Q6JBY9 416 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 HHIPL2Q6UWX4 724 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 CRACR2BQ8N4Y2 399 aaPredicted RBP8.35□□□□□ -1.07
TMC1-204ENST00000486417 TEKT1Q969V4 418 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 PGBD1Q96JS3 809 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 MKNK2Q9HBH9 465 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 KCNQ5Q9NR82 932 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 IL17RBQ9NRM6 502 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 TCP11L1Q9NUJ3 509 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 RCOR1Q9UKL0 485 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 PLIN4Q96Q06 1357 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 ARFGEF1Q9Y6D6 1849 aa8.35□□□□□ -1.07
TMC1-204ENST00000486417 USP17L3A6NCW0 530 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 USP17L4A6NCW7 530 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 TMEM88BA6NKF7 163 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 WDHD1O75717 1129 aaPredicted RBP8.34□□□□□ -1.07
TMC1-204ENST00000486417 TSPY3P0CV98 308 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 TSPY8P0CW00 308 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 LIG1P18858 919 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 CRKP46108 304 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 CDK8P49336 464 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 CEBPZQ03701 1054 aaKnown RBP8.34□□□□□ -1.07
TMC1-204ENST00000486417 PICALMQ13492 652 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 PDXDC2PQ6P474 469 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 TMTC3Q6ZXV5 915 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 SND1Q7KZF4 910 aaKnown RBP eCLIP8.34□□□□□ -1.07
TMC1-204ENST00000486417 USP17L1Q7RTZ2 530 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 DGKHQ86XP1 1220 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms