RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 ADD2P35612 726 aa23.26■■□□□ 1.31
CHRD-216ENST00000486066 MYADML2A6NDP7 307 aa23.25■■□□□ 1.31
CHRD-216ENST00000486066 ADCY6O43306 1168 aa23.25■■□□□ 1.31
CHRD-216ENST00000486066 MFSD5Q6N075 450 aa23.25■■□□□ 1.31
CHRD-216ENST00000486066 TIFAQ96CG3 184 aa23.25■■□□□ 1.31
CHRD-216ENST00000486066 KANSL2Q9H9L4 492 aa23.25■■□□□ 1.31
CHRD-216ENST00000486066 STARD7Q9NQZ5 370 aa23.25■■□□□ 1.31
CHRD-216ENST00000486066 GBF1Q92538 1859 aa23.25■■□□□ 1.31
CHRD-216ENST00000486066 KCNA10Q16322 511 aa23.24■■□□□ 1.31
CHRD-216ENST00000486066 TMEM240Q5SV17 173 aa23.24■■□□□ 1.31
CHRD-216ENST00000486066 FTSJ3Q8IY81 847 aaKnown RBP23.24■■□□□ 1.31
CHRD-216ENST00000486066 FGD4Q96M96 766 aa23.24■■□□□ 1.31
CHRD-216ENST00000486066 PBX4Q9BYU1 374 aa23.24■■□□□ 1.31
CHRD-216ENST00000486066 ELP1O95163 1332 aa23.24■■□□□ 1.31
CHRD-216ENST00000486066 DCDC2CA8MYV0 355 aa23.23■■□□□ 1.31
CHRD-216ENST00000486066 USP17L12C9JPN9 530 aa23.23■■□□□ 1.31
CHRD-216ENST00000486066 USP17L21D6R901 530 aa23.23■■□□□ 1.31
CHRD-216ENST00000486066 TNFRSF10AO00220 468 aa23.23■■□□□ 1.31
CHRD-216ENST00000486066 DUSP11O75319 330 aaKnown RBP23.23■■□□□ 1.31
CHRD-216ENST00000486066 MBD4O95243 580 aa23.23■■□□□ 1.31
CHRD-216ENST00000486066 CHGBP05060 677 aa23.23■■□□□ 1.31
CHRD-216ENST00000486066 IRX5P78411 483 aaPredicted RBP23.23■■□□□ 1.31
CHRD-216ENST00000486066 FAM83BQ5T0W9 1011 aa23.23■■□□□ 1.31
CHRD-216ENST00000486066 ZNF467Q7Z7K2 595 aaPredicted RBP23.23■■□□□ 1.31
CHRD-216ENST00000486066 NUP133Q8WUM0 1156 aa23.23■■□□□ 1.31
CHRD-216ENST00000486066 UPF3AQ9H1J1 476 aaKnown RBP23.23■■□□□ 1.31
CHRD-216ENST00000486066 CNPY2Q9Y2B0 182 aa23.23■■□□□ 1.31
CHRD-216ENST00000486066 RIPK3Q9Y572 518 aa23.23■■□□□ 1.31
CHRD-216ENST00000486066 ATP2A1O14983 1001 aa23.22■■□□□ 1.31
CHRD-216ENST00000486066 PBX2P40425 430 aa23.22■■□□□ 1.31
CHRD-216ENST00000486066 NKX3-2P78367 333 aa23.22■■□□□ 1.31
CHRD-216ENST00000486066 HSP90AB4PQ58FF6 505 aa23.22■■□□□ 1.31
CHRD-216ENST00000486066 AKNAD1Q5T1N1 836 aa23.22■■□□□ 1.31
CHRD-216ENST00000486066 DNAJC2Q99543 621 aaKnown RBP23.22■■□□□ 1.31
CHRD-216ENST00000486066 FAM184BQ9ULE4 1060 aa23.22■■□□□ 1.31
CHRD-216ENST00000486066 CTAGE5O15320 804 aa23.21■■□□□ 1.31
CHRD-216ENST00000486066 SAMD1Q6SPF0 538 aaPredicted RBP23.21■■□□□ 1.31
CHRD-216ENST00000486066 TEX13BQ9BXU2 312 aa23.21■■□□□ 1.31
CHRD-216ENST00000486066 GOPCQ9HD26 462 aa23.21■■□□□ 1.31
CHRD-216ENST00000486066 MYH4Q9Y623 1939 aa23.2■■□□□ 1.3
CHRD-216ENST00000486066 MROH7Q68CQ1 1323 aa23.2■■□□□ 1.3
CHRD-216ENST00000486066 GRXCR1A8MXD5 290 aa23.2■■□□□ 1.3
CHRD-216ENST00000486066 CTR9Q6PD62 1173 aa23.2■■□□□ 1.3
CHRD-216ENST00000486066 FAM126BQ8IXS8 530 aa23.2■■□□□ 1.3
CHRD-216ENST00000486066 ATXN2LQ8WWM7 1075 aaKnown RBP23.2■■□□□ 1.3
CHRD-216ENST00000486066 KIF1BPQ96EK5 621 aa23.2■■□□□ 1.3
CHRD-216ENST00000486066 KATNBL1Q9H079 304 aa23.2■■□□□ 1.3
CHRD-216ENST00000486066 PAG1Q9NWQ8 432 aa23.2■■□□□ 1.3
CHRD-216ENST00000486066 COL9A1P20849 921 aa23.19■■□□□ 1.3
CHRD-216ENST00000486066 GJA9P57773 515 aa23.19■■□□□ 1.3
CHRD-216ENST00000486066 PPIGQ13427 754 aaKnown RBP eCLIP23.19■■□□□ 1.32e-14■■■■□ 20.7
CHRD-216ENST00000486066 ADGRE1Q14246 886 aa23.19■■□□□ 1.3
CHRD-216ENST00000486066 UBE3CQ15386 1083 aa23.19■■□□□ 1.3
CHRD-216ENST00000486066 SIRT2Q8IXJ6 389 aa23.19■■□□□ 1.3
CHRD-216ENST00000486066 CLASRPQ8N2M8 674 aaKnown RBP23.19■■□□□ 1.3
CHRD-216ENST00000486066 SLF1Q9BQI6 1058 aa23.19■■□□□ 1.3
CHRD-216ENST00000486066 LRRC37A2A6NM11 1700 aa23.19■■□□□ 1.3
CHRD-216ENST00000486066 CD4P01730 458 aa23.18■■□□□ 1.3
CHRD-216ENST00000486066 ASGR1P07306 291 aa23.18■■□□□ 1.3
CHRD-216ENST00000486066 CSF2RAP15509 400 aa23.18■■□□□ 1.3
CHRD-216ENST00000486066 SNRNP48Q6IEG0 339 aaKnown RBP23.18■■□□□ 1.3
CHRD-216ENST00000486066 GLT1D1Q96MS3 346 aa23.18■■□□□ 1.3
CHRD-216ENST00000486066 NUP88Q99567 741 aaPredicted RBP23.18■■□□□ 1.3
CHRD-216ENST00000486066 ARVCFO00192 962 aa23.17■■□□□ 1.3
CHRD-216ENST00000486066 ATP5JP18859 108 aa23.17■■□□□ 1.3
CHRD-216ENST00000486066 ACVR2BQ13705 512 aa23.17■■□□□ 1.3
CHRD-216ENST00000486066 SLC43A3Q8NBI5 491 aa23.17■■□□□ 1.3
CHRD-216ENST00000486066 HAUS7Q99871 368 aa23.17■■□□□ 1.3
CHRD-216ENST00000486066 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.17■■□□□ 1.3
CHRD-216ENST00000486066 NYAP2Q9P242 653 aa23.17■■□□□ 1.3
CHRD-216ENST00000486066 IGKV6D-41A0A0C4DH26 115 aa23.16■■□□□ 1.3
CHRD-216ENST00000486066 ZNF365Q70YC5 407 aa23.16■■□□□ 1.3
CHRD-216ENST00000486066 PCSK9Q8NBP7 692 aaKnown RBP23.16■■□□□ 1.3
CHRD-216ENST00000486066 ASB2Q96Q27 587 aa23.16■■□□□ 1.3
CHRD-216ENST00000486066 PUS7LQ9H0K6 701 aaKnown RBP23.16■■□□□ 1.3
CHRD-216ENST00000486066 ABHD16BQ9H3Z7 469 aa23.16■■□□□ 1.3
CHRD-216ENST00000486066 PRDM12Q9H4Q4 367 aa23.16■■□□□ 1.3
CHRD-216ENST00000486066 ZHX1Q9UKY1 873 aaPredicted RBP23.16■■□□□ 1.3
CHRD-216ENST00000486066 A0A0U1RQG5 324 aaPredicted RBP23.15■■□□□ 1.3
CHRD-216ENST00000486066 NDUFB10O96000 172 aa23.15■■□□□ 1.3
CHRD-216ENST00000486066 RASA1P20936 1047 aa23.15■■□□□ 1.3
CHRD-216ENST00000486066 CCDC144BQ3MJ40 725 aa23.15■■□□□ 1.3
CHRD-216ENST00000486066 PSRC1Q6PGN9 363 aaPredicted RBP23.15■■□□□ 1.3
CHRD-216ENST00000486066 PRPF38AQ8NAV1 312 aaKnown RBP23.15■■□□□ 1.3
CHRD-216ENST00000486066 PANK1Q8TE04 598 aa23.15■■□□□ 1.3
CHRD-216ENST00000486066 HERVK_113Q902F9 699 aa23.15■■□□□ 1.3
CHRD-216ENST00000486066 GAS2L1Q99501 681 aaPredicted RBP23.15■■□□□ 1.3
CHRD-216ENST00000486066 BOLA2Q9H3K6 86 aa23.15■■□□□ 1.3
CHRD-216ENST00000486066 SLC38A10Q9HBR0 1119 aa23.15■■□□□ 1.3
CHRD-216ENST00000486066 THEGQ9P2T0 379 aa23.15■■□□□ 1.3
CHRD-216ENST00000486066 ASTN1O14525 1302 aa23.14■■□□□ 1.3
CHRD-216ENST00000486066 F5H6K3 240 aa23.14■■□□□ 1.29
CHRD-216ENST00000486066 IFIT2P09913 472 aaKnown RBP23.14■■□□□ 1.29
CHRD-216ENST00000486066 C6orf222P0C671 652 aaPredicted RBP23.14■■□□□ 1.29
CHRD-216ENST00000486066 KLRC3Q07444 240 aa23.14■■□□□ 1.29
CHRD-216ENST00000486066 SBK1Q52WX2 424 aa23.14■■□□□ 1.29
CHRD-216ENST00000486066 CCDC174Q6PII3 467 aa23.14■■□□□ 1.29
CHRD-216ENST00000486066 VWCEQ96DN2 955 aa23.14■■□□□ 1.29
CHRD-216ENST00000486066 CXXC1Q9P0U4 656 aaPredicted RBP23.14■■□□□ 1.29
CHRD-216ENST00000486066 SLC4A4Q9Y6R1 1079 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms