RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 SNX17Q15036 470 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 IMMTQ16891 758 aaKnown RBP14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 FAM47AQ5JRC9 791 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 MFSD6Q6ZSS7 791 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 Q7L0L9 218 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 DPP9Q86TI2 863 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 RNF41Q9H4P4 317 aaPredicted RBP14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 RPAP3Q9H6T3 665 aaPredicted RBP14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 VCPKMTQ9H867 229 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 INCENPQ9NQS7 918 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 FLRT1Q9NZU1 646 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 BTBD7Q9P203 1132 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 CLIP2Q9UDT6 1046 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 SMCHD1A6NHR9 2005 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 MYH8P13535 1937 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 IGKV6D-41A0A0C4DH26 115 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 KBTBD13C9JR72 458 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 SGSM2O43147 1006 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 RANBP6O60518 1105 aaKnown RBP14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 PEX10O60683 326 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 TTLL1O95922 423 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 CNGA1P29973 690 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 HAND2P61296 217 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 MDM2Q00987 491 aaPredicted RBP14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 AKNAD1Q5T1N1 836 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 WDR78Q5VTH9 848 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 CLEC10AQ8IUN9 316 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 NPLOC4Q8TAT6 608 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 MKL1Q969V6 931 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 CEP95Q96GE4 821 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 SPATC1LQ9H0A9 340 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 GOPCQ9HD26 462 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 TOMM22Q9NS69 142 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 MTMR4Q9NYA4 1195 aa14.16□□□□□ -0.14
HLA-DOA-204ENST00000485901 TMEM265A0A087WTH1 108 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 SLC25A27O95847 323 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 ADORA2AP29274 412 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 NT5C2P49902 561 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 RRP12Q5JTH9 1297 aaKnown RBP14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 ZNF697Q5TEC3 545 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 CASC1Q6TDU7 716 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 SLC39A5Q6ZMH5 540 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 KIAA1211Q6ZU35 1233 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 STAG1Q8WVM7 1258 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 MOV10L1Q9BXT6 1211 aaKnown RBP14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 IL25Q9H293 177 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 SYNPO2Q9UMS6 1093 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 DIS3Q9Y2L1 958 aaKnown RBP14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 LTBP2Q14767 1821 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 A0A0G2JMZ2 1700 aa14.15□□□□□ -0.14
HLA-DOA-204ENST00000485901 PLIN4Q96Q06 1357 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 F5H6K3 240 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 WDR46O15213 610 aaKnown RBP14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 RAD21O60216 631 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 DSG3P32926 999 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 CYP2C19P33261 490 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 COPB2P35606 906 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 RTP1P59025 263 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 SMAD3P84022 425 aaKnown RBP14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 KLRC3Q07444 240 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 SPICE1Q8N0Z3 855 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 TANGO6Q9C0B7 1094 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 TACC3Q9Y6A5 838 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 U3KPZ7 1027 aaPredicted RBP14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 VCANP13611 3396 aa14.14□□□□□ -0.15
HLA-DOA-204ENST00000485901 KIAA1755Q5JYT7 1200 aa14.13□□□□□ -0.15
HLA-DOA-204ENST00000485901 TRPV1Q8NER1 839 aa14.13□□□□□ -0.15
HLA-DOA-204ENST00000485901 ESR2Q92731 530 aa14.13□□□□□ -0.15
HLA-DOA-204ENST00000485901 GUCD1Q96NT3 240 aa14.13□□□□□ -0.15
HLA-DOA-204ENST00000485901 TCP11L1Q9NUJ3 509 aa14.13□□□□□ -0.15
HLA-DOA-204ENST00000485901 ADAMTS5Q9UNA0 930 aa14.13□□□□□ -0.15
HLA-DOA-204ENST00000485901 TTC28Q96AY4 2481 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 FCER1AP12319 257 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 ERCC3P19447 782 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 PTH1RQ03431 593 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 TBC1D10CQ8IV04 446 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 MSL3Q8N5Y2 521 aaKnown RBP14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 GMCL1P1Q8NEA9 526 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 MAP4K1Q92918 833 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 TTC14Q96N46 770 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 ESYT1Q9BSJ8 1104 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 CNNM2Q9H8M5 875 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 IL17RBQ9NRM6 502 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 STX8Q9UNK0 236 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 PARP14Q460N5 1801 aa14.12□□□□□ -0.15
HLA-DOA-204ENST00000485901 NMT2O60551 498 aa14.11□□□□□ -0.15
HLA-DOA-204ENST00000485901 CDC45O75419 566 aa14.11□□□□□ -0.15
HLA-DOA-204ENST00000485901 FLOT1O75955 427 aa14.11□□□□□ -0.15
HLA-DOA-204ENST00000485901 NDUFB10O96000 172 aa14.11□□□□□ -0.15
HLA-DOA-204ENST00000485901 NOVP48745 357 aa14.11□□□□□ -0.15
HLA-DOA-204ENST00000485901 ATN1P54259 1190 aaPredicted RBP14.11□□□□□ -0.15
HLA-DOA-204ENST00000485901 CCDC178Q5BJE1 867 aa14.11□□□□□ -0.15
HLA-DOA-204ENST00000485901 PRUNE2Q8WUY3 3088 aa14.11□□□□□ -0.15
HLA-DOA-204ENST00000485901 MAML3Q96JK9 1138 aa14.11□□□□□ -0.15
HLA-DOA-204ENST00000485901 KRT23Q9C075 422 aa14.11□□□□□ -0.15
HLA-DOA-204ENST00000485901 NCOR1O75376 2440 aa14.11□□□□□ -0.15
HLA-DOA-204ENST00000485901 COBLO75128 1261 aa14.1□□□□□ -0.15
HLA-DOA-204ENST00000485901 TRDNQ13061 729 aa14.1□□□□□ -0.15
HLA-DOA-204ENST00000485901 LRRC41Q15345 812 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms