RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 PPP1R9AQ9ULJ8 1098 aa10.46□□□□□ -0.73
RTFDC1-208ENST00000484084 EXOC6BQ9Y2D4 811 aa10.46□□□□□ -0.73
RTFDC1-208ENST00000484084 ZBED9Q6R2W3 1325 aa10.46□□□□□ -0.73
RTFDC1-208ENST00000484084 GRIN2DO15399 1336 aa10.45□□□□□ -0.74
RTFDC1-208ENST00000484084 CD4P01730 458 aa10.45□□□□□ -0.74
RTFDC1-208ENST00000484084 ACRP10323 421 aa10.45□□□□□ -0.74
RTFDC1-208ENST00000484084 CDK8P49336 464 aa10.45□□□□□ -0.74
RTFDC1-208ENST00000484084 ZKSCAN2Q63HK3 967 aa10.45□□□□□ -0.74
RTFDC1-208ENST00000484084 ZNF365Q70YC5 407 aa10.45□□□□□ -0.74
RTFDC1-208ENST00000484084 ADAMTS19Q8TE59 1207 aa10.45□□□□□ -0.74
RTFDC1-208ENST00000484084 CRNKL1Q9BZJ0 848 aaKnown RBP10.45□□□□□ -0.74
RTFDC1-208ENST00000484084 UPF3AQ9H1J1 476 aaKnown RBP10.45□□□□□ -0.74
RTFDC1-208ENST00000484084 STARD7Q9NQZ5 370 aa10.45□□□□□ -0.74
RTFDC1-208ENST00000484084 YBX2Q9Y2T7 364 aaKnown RBP10.45□□□□□ -0.74
RTFDC1-208ENST00000484084 ASTN1O14525 1302 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 ELP1O95163 1332 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 UMODL1Q5DID0 1318 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 SYNGAP1Q96PV0 1343 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 MOXD2PA6NHM9 499 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 DUSP11O75319 330 aaKnown RBP10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 BMP1P13497 986 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 PTGS1P23219 599 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 KCTD2Q14681 263 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 FAM83BQ5T0W9 1011 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 C16orf86Q6ZW13 317 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 MSL3Q8N5Y2 521 aaKnown RBP10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 SLC43A3Q8NBI5 491 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 PPM1EQ8WY54 764 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 NECAB3Q96P71 396 aaPredicted RBP10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 NUP88Q99567 741 aaPredicted RBP10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 ARHGEF10LQ9HCE6 1279 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 IL1RAPL2Q9NP60 686 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 MCM3APO60318 1980 aa10.44□□□□□ -0.74
RTFDC1-208ENST00000484084 DCDC2CA8MYV0 355 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 USP17L12C9JPN9 530 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 USP17L21D6R901 530 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 GOLIM4O00461 696 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 ATP2A1O14983 1001 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 ASGR1P07306 291 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 ADD2P35612 726 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 PLA2G5P39877 138 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 GJA9P57773 515 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 ZNF467Q7Z7K2 595 aaPredicted RBP10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 SIRT2Q8IXJ6 389 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 RHPN1Q8TCX5 695 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 HERVK_113Q902F9 699 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 FAM184BQ9ULE4 1060 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 LRRC37A2A6NM11 1700 aa10.43□□□□□ -0.74
RTFDC1-208ENST00000484084 ARVCFO00192 962 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 MBD4O95243 580 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 CYP2C18P33260 490 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 ACVR2BQ13705 512 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 TTF1Q15361 905 aaPredicted RBP10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 CCDC85BQ15834 202 aaPredicted RBP10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 CCDC144BQ3MJ40 725 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 TMEM63BQ5T3F8 832 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 CTR9Q6PD62 1173 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 SAMD1Q6SPF0 538 aaPredicted RBP10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 NUP133Q8WUM0 1156 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 CCDC17Q96LX7 622 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 KANSL2Q9H9L4 492 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 ATP8A2Q9NTI2 1148 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 THEGQ9P2T0 379 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 CNPY2Q9Y2B0 182 aa10.42□□□□□ -0.74
RTFDC1-208ENST00000484084 IGKV6D-41A0A0C4DH26 115 aa10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 MYOGP15173 224 aa10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 MRPS5P82675 430 aaKnown RBP10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 PPIGQ13427 754 aaKnown RBP eCLIP10.41□□□□□ -0.744e-11■■□□□ 13.5
RTFDC1-208ENST00000484084 GLT1D1Q96MS3 346 aa10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 UHRF1Q96T88 793 aaPredicted RBP10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 TEX13BQ9BXU2 312 aa10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 PPP1R12CQ9BZL4 782 aa10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 WNT8AQ9H1J5 351 aa10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 NKX2-4Q9H2Z4 354 aa10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 SH2D4AQ9H788 454 aa10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 IL23AQ9NPF7 189 aa10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 ZHX1Q9UKY1 873 aaPredicted RBP10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 GNEQ9Y223 722 aaKnown RBP10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 DDX49Q9Y6V7 483 aaKnown RBP10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 LCTP09848 1927 aa10.41□□□□□ -0.74
RTFDC1-208ENST00000484084 TCF20Q9UGU0 1960 aaKnown RBP10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 F5H6K3 240 aa10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 NDUFB10O96000 172 aa10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 C6orf222P0C671 652 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 RASA1P20936 1047 aa10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 HOXD11P31277 338 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 RABGGTBP53611 331 aa10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 BEX3Q00994 111 aa10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 TFF2Q03403 129 aa10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 KLRC3Q07444 240 aa10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 SNRNP48Q6IEG0 339 aaKnown RBP10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 TMEM199Q8N511 208 aa10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 DNAJC2Q99543 621 aaKnown RBP10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 SLF1Q9BQI6 1058 aa10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 PUS7LQ9H0K6 701 aaKnown RBP10.4□□□□□ -0.74
RTFDC1-208ENST00000484084 SLC38A10Q9HBR0 1119 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms