RNA–Protein interactions for RNA: ENST00000484074.5

FNDC3A-203, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best)

Gene FNDC3A, Length 6,082 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-203ENST00000484074 RNASE9P60153 205 aaKnown RBP4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 IL1RL1Q01638 556 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 CEP85LQ5SZL2 805 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 ARMCX2Q7L311 632 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 PHLDB2Q86SQ0 1253 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 PATL1Q86TB9 770 aaKnown RBP4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 PDCL2Q8N4E4 241 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 TBC1D19Q8N5T2 526 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 SLC7A3Q8WY07 619 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 LPIN2Q92539 896 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 ATP6V0A1Q93050 837 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 EDEM3Q9BZQ6 932 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 IFT122Q9HBG6 1241 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 ATP8A2Q9NTI2 1148 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 HACD3Q9P035 362 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 MYO1AQ9UBC5 1043 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 PAXBP1Q9Y5B6 917 aa4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 FRMPD2Q68DX3 1309 aaPredicted RBP4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 DHX29Q7Z478 1369 aaKnown RBP4.4□□□□□ -1.71
FNDC3A-203ENST00000484074 ERICH4A6NGS2 130 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 KIF3CO14782 793 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CYBBP04839 570 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 RXRAP19793 462 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 LRMPQ12912 555 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 HSP90AA4PQ58FG1 418 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CCDC122Q5T0U0 273 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 MYSM1Q5VVJ2 828 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 TTBK2Q6IQ55 1244 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 SLFN12Q8IYM2 578 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 ZNF513Q8N8E2 541 aaPredicted RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CDC26Q8NHZ8 85 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 MAIP1Q8WWC4 291 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 FAM49AQ9H0Q0 323 aaPredicted RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 DBNDD1Q9H9R9 158 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 LRRC4Q9HBW1 653 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 SRPRBQ9Y5M8 271 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 FPGT-TNNI3KV9GXZ4 949 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 KDM3AQ9Y4C1 1321 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 MAP3K5Q99683 1374 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 ABCC5O15440 1437 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 KIF14Q15058 1648 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CTAGE15A4D2H0 777 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 HMGB3O15347 200 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 F13A1P00488 732 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CTAGE8P0CG41 777 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 GBP1P32455 592 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 BTDP43251 543 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 GNG11P61952 73 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 USPL1Q5W0Q7 1092 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CTAGE6Q86UF2 777 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 PLA2G4DQ86XP0 818 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 APOBEC3FQ8IUX4 373 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CTAGE4Q8IX94 777 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 SPATA5Q8NB90 893 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 UBLCP1Q8WVY7 318 aaPredicted RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 STN1Q9H668 368 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 PSTPIP2Q9H939 334 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 EVA1BQ9NVM1 165 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 HACL1Q9UJ83 578 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 NSD2O96028 1365 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 NCOA1Q15788 1441 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 TPD52L2O43399 206 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 STMN1P16949 149 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 SLC9A5Q14940 896 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 PRR16Q569H4 304 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 GPATCH4Q5T3I0 446 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 RC3H1Q5TC82 1133 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 ANKS3Q6ZW76 656 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 INTS8Q75QN2 995 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CCDC13Q8IYE1 715 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 DCLK2Q8N568 766 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 PIK3R5Q8WYR1 880 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CDHR1Q96JP9 859 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 RGL1Q9NZL6 768 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CTNND2Q9UQB3 1225 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 RIPOR2Q9Y4F9 1068 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 ARHGEF11O15085 1522 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 ACTN4O43707 911 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 DEXIO95424 95 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 NESP48681 1621 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 RBM6P78332 1123 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 RAD51AP2Q09MP3 1159 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 DCAF4L1Q3SXM0 396 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 NT5DC4Q86YG4 428 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CCDC170Q8IYT3 715 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 LINS1Q8NG48 757 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 GOLGA5Q8TBA6 731 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 IP6K1Q92551 441 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 MRPS27Q92552 414 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 PBXIP1Q96AQ6 731 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 SDCCAG3Q96C92 435 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 NR1H4Q96RI1 486 aaPredicted RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.39□□□□□ -1.716e-7■■□□□ 12.7
FNDC3A-203ENST00000484074 NT5C3AQ9H0P0 336 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 COG4Q9H9E3 785 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 SYTL2Q9HCH5 934 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 UTP11Q9Y3A2 253 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CC2D2AQ9P2K1 1620 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 CYP2J2P51589 502 aa4.39□□□□□ -1.71
FNDC3A-203ENST00000484074 ZNF75DP51815 510 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms