RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ZNF865P0CJ78 1059 aaPredicted RBP21.47■■□□□ 1.03
ATG4B-221ENST00000483778 TFAP4Q01664 338 aa21.47■■□□□ 1.03
ATG4B-221ENST00000483778 PPARAQ07869 468 aa21.47■■□□□ 1.03
ATG4B-221ENST00000483778 KCTD2Q14681 263 aa21.47■■□□□ 1.03
ATG4B-221ENST00000483778 VPS53Q5VIR6 699 aa21.47■■□□□ 1.03
ATG4B-221ENST00000483778 SNRNP48Q6IEG0 339 aaKnown RBP21.47■■□□□ 1.03
ATG4B-221ENST00000483778 Q7L0L9 218 aa21.47■■□□□ 1.03
ATG4B-221ENST00000483778 TDHQ8IZJ6 230 aa21.47■■□□□ 1.03
ATG4B-221ENST00000483778 KIFC2Q96AC6 838 aa21.47■■□□□ 1.03
ATG4B-221ENST00000483778 ATP11BQ9Y2G3 1177 aa21.47■■□□□ 1.03
ATG4B-221ENST00000483778 DNAJC25-GNG10A0A024R161 153 aa21.46■■□□□ 1.03
ATG4B-221ENST00000483778 PGK1P00558 417 aa21.46■■□□□ 1.03
ATG4B-221ENST00000483778 TEX13BQ9BXU2 312 aa21.46■■□□□ 1.03
ATG4B-221ENST00000483778 NAPBQ9H115 298 aa21.46■■□□□ 1.03
ATG4B-221ENST00000483778 DIS3Q9Y2L1 958 aaKnown RBP21.46■■□□□ 1.03
ATG4B-221ENST00000483778 KBTBD13C9JR72 458 aa21.45■■□□□ 1.02
ATG4B-221ENST00000483778 NMT2O60551 498 aa21.45■■□□□ 1.02
ATG4B-221ENST00000483778 SNAI1O95863 264 aaPredicted RBP21.45■■□□□ 1.02
ATG4B-221ENST00000483778 TTLL1O95922 423 aa21.45■■□□□ 1.02
ATG4B-221ENST00000483778 LRIT3Q3SXY7 679 aa21.45■■□□□ 1.02
ATG4B-221ENST00000483778 SLFN13Q68D06 897 aa21.45■■□□□ 1.02
ATG4B-221ENST00000483778 NACAP1Q9BZK3 213 aa21.45■■□□□ 1.02
ATG4B-221ENST00000483778 SLC38A10Q9HBR0 1119 aa21.45■■□□□ 1.02
ATG4B-221ENST00000483778 IL17RBQ9NRM6 502 aa21.45■■□□□ 1.02
ATG4B-221ENST00000483778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.45■■□□□ 1.02
ATG4B-221ENST00000483778 TSPY3P0CV98 308 aa21.44■■□□□ 1.02
ATG4B-221ENST00000483778 TSPY8P0CW00 308 aa21.44■■□□□ 1.02
ATG4B-221ENST00000483778 PDE1AP54750 535 aa21.44■■□□□ 1.02
ATG4B-221ENST00000483778 IRX5P78411 483 aaPredicted RBP21.44■■□□□ 1.02
ATG4B-221ENST00000483778 LRRFIP1Q32MZ4 808 aaKnown RBP21.44■■□□□ 1.02
ATG4B-221ENST00000483778 TRIM60Q495X7 471 aa21.44■■□□□ 1.02
ATG4B-221ENST00000483778 RASGRP2Q7LDG7 609 aa21.44■■□□□ 1.02
ATG4B-221ENST00000483778 SH3RF1Q7Z6J0 888 aa21.44■■□□□ 1.02
ATG4B-221ENST00000483778 FGD4Q96M96 766 aa21.44■■□□□ 1.02
ATG4B-221ENST00000483778 PLIN4Q96Q06 1357 aa21.44■■□□□ 1.02
ATG4B-221ENST00000483778 ATP2A1O14983 1001 aa21.43■■□□□ 1.02
ATG4B-221ENST00000483778 ZBED4O75132 1171 aa21.43■■□□□ 1.02
ATG4B-221ENST00000483778 PDE4BQ07343 736 aa21.43■■□□□ 1.02
ATG4B-221ENST00000483778 GMCL1P1Q8NEA9 526 aa21.43■■□□□ 1.02
ATG4B-221ENST00000483778 DDX11Q96FC9 970 aa21.43■■□□□ 1.02
ATG4B-221ENST00000483778 ZNF287Q9HBT7 754 aa21.43■■□□□ 1.02
ATG4B-221ENST00000483778 XPNPEP3Q9NQH7 507 aa21.43■■□□□ 1.02
ATG4B-221ENST00000483778 FEM1BQ9UK73 627 aa21.43■■□□□ 1.02
ATG4B-221ENST00000483778 BMP3P12645 472 aa21.42■■□□□ 1.02
ATG4B-221ENST00000483778 COPB2P35606 906 aa21.42■■□□□ 1.02
ATG4B-221ENST00000483778 SNAP25P60880 206 aa21.42■■□□□ 1.02
ATG4B-221ENST00000483778 HDAC1Q13547 482 aaPredicted RBP21.42■■□□□ 1.02
ATG4B-221ENST00000483778 SNX17Q15036 470 aa21.42■■□□□ 1.02
ATG4B-221ENST00000483778 FAM227BQ96M60 508 aa21.42■■□□□ 1.02
ATG4B-221ENST00000483778 NRBP1Q9UHY1 535 aa21.42■■□□□ 1.02
ATG4B-221ENST00000483778 TRIM43BA6NCK2 446 aa21.41■■□□□ 1.02
ATG4B-221ENST00000483778 TMEM232C9JQI7 657 aa21.41■■□□□ 1.02
ATG4B-221ENST00000483778 RARBP10826 455 aa21.41■■□□□ 1.02
ATG4B-221ENST00000483778 MCCP23508 829 aa21.41■■□□□ 1.02
ATG4B-221ENST00000483778 DEFB123Q8N688 67 aa21.41■■□□□ 1.02
ATG4B-221ENST00000483778 TRIM43Q96BQ3 446 aaPredicted RBP21.41■■□□□ 1.02
ATG4B-221ENST00000483778 PHF24Q9UPV7 400 aa21.41■■□□□ 1.02
ATG4B-221ENST00000483778 ZNF536O15090 1300 aa21.4■■□□□ 1.02
ATG4B-221ENST00000483778 A0A0D9SFI3 127 aa21.4■■□□□ 1.02
ATG4B-221ENST00000483778 ADCY6O43306 1168 aa21.4■■□□□ 1.02
ATG4B-221ENST00000483778 CNTN2Q02246 1040 aa21.4■■□□□ 1.02
ATG4B-221ENST00000483778 TLE2Q04725 743 aa21.4■■□□□ 1.02
ATG4B-221ENST00000483778 MAMDC4Q6UXC1 1216 aa21.4■■□□□ 1.02
ATG4B-221ENST00000483778 EVI5LQ96CN4 794 aa21.4■■□□□ 1.02
ATG4B-221ENST00000483778 AGBL1Q96MI9 1066 aa21.4■■□□□ 1.02
ATG4B-221ENST00000483778 YTHDC1Q96MU7 727 aaKnown RBP21.4■■□□□ 1.02
ATG4B-221ENST00000483778 LBHD1Q9BQE6 289 aaPredicted RBP21.4■■□□□ 1.02
ATG4B-221ENST00000483778 HOMER2Q9NSB8 354 aa21.4■■□□□ 1.02
ATG4B-221ENST00000483778 LCTP09848 1927 aa21.39■■□□□ 1.02
ATG4B-221ENST00000483778 MYADML2A6NDP7 307 aa21.39■■□□□ 1.01
ATG4B-221ENST00000483778 ADAMTS4O75173 837 aa21.39■■□□□ 1.01
ATG4B-221ENST00000483778 SLC3A2P08195 630 aaKnown RBP21.39■■□□□ 1.01
ATG4B-221ENST00000483778 ITGB8P26012 769 aa21.39■■□□□ 1.01
ATG4B-221ENST00000483778 KCTD1Q719H9 257 aa21.39■■□□□ 1.01
ATG4B-221ENST00000483778 BADQ92934 168 aa21.39■■□□□ 1.01
ATG4B-221ENST00000483778 LNPKQ9C0E8 428 aa21.39■■□□□ 1.01
ATG4B-221ENST00000483778 PRDM5Q9NQX1 630 aaPredicted RBP21.39■■□□□ 1.01
ATG4B-221ENST00000483778 PDLIM7Q9NR12 457 aa21.39■■□□□ 1.01
ATG4B-221ENST00000483778 SYNPO2Q9UMS6 1093 aa21.39■■□□□ 1.01
ATG4B-221ENST00000483778 DDX49Q9Y6V7 483 aaKnown RBP21.39■■□□□ 1.01
ATG4B-221ENST00000483778 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.38■■□□□ 1.01
ATG4B-221ENST00000483778 STAG1Q8WVM7 1258 aa21.38■■□□□ 1.01
ATG4B-221ENST00000483778 GMCL1Q96IK5 515 aa21.38■■□□□ 1.01
ATG4B-221ENST00000483778 MTMR10Q9NXD2 777 aa21.38■■□□□ 1.01
ATG4B-221ENST00000483778 ANAPC4Q9UJX5 808 aa21.38■■□□□ 1.01
ATG4B-221ENST00000483778 ISY1Q9ULR0 285 aaKnown RBP21.38■■□□□ 1.01
ATG4B-221ENST00000483778 MTMR7Q9Y216 660 aa21.38■■□□□ 1.01
ATG4B-221ENST00000483778 CNPY2Q9Y2B0 182 aa21.38■■□□□ 1.01
ATG4B-221ENST00000483778 CTDP1Q9Y5B0 961 aaPredicted RBP21.38■■□□□ 1.01
ATG4B-221ENST00000483778 SYNGAP1Q96PV0 1343 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 TSPY2A6NKD2 308 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 RANBP6O60518 1105 aaKnown RBP21.37■■□□□ 1.01
ATG4B-221ENST00000483778 IGHDP01880 384 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 FGAP02671 866 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 AKR1A1P14550 325 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 SHHQ15465 462 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 ALX1Q15699 326 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 C9orf50Q5SZB4 431 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 GPR153Q6NV75 609 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 ZNF589Q86UQ0 364 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms