RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 LARP6Q9BRS8 491 aaKnown RBP13.26□□□□□ -0.29
PTPN18-212ENST00000483617 INCENPQ9NQS7 918 aa13.26□□□□□ -0.29
PTPN18-212ENST00000483617 CHMP5Q9NZZ3 219 aa13.26□□□□□ -0.29
PTPN18-212ENST00000483617 TNKSO95271 1327 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 USP17L15C9J2P7 530 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 USP17L13C9JLJ4 530 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 USP17L11C9JVI0 530 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 USP17L18D6R9N7 530 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 USP17L22D6RA61 530 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 USP17L17D6RBQ6 530 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 USP17L19D6RCP7 530 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 USP17L20D6RJB6 530 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 MPHOSPH10O00566 681 aaKnown RBP13.25□□□□□ -0.29
PTPN18-212ENST00000483617 ZBTB43O43298 467 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 PEX10O60683 326 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 PFKFB2O60825 505 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 CDKL5O76039 1030 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 CALM1P0DP23 149 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 CALM2P0DP24 149 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 CALM3P0DP25 149 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 VCAM1P19320 739 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 PDCP20941 246 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 RCAN1P53805 252 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 EVCP57679 992 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 ERVK-9P63128 1117 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 ERVK-24P63145 666 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 NUCB2P80303 420 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 USP17L24Q0WX57 530 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 SEPT2Q15019 361 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 SGMS1Q86VZ5 419 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 SLC44A5Q8NCS7 719 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 IGDCC4Q8TDY8 1250 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 U2AF1L4Q8WU68 220 aaKnown RBP13.25□□□□□ -0.29
PTPN18-212ENST00000483617 SOCS4Q8WXH5 440 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 GTF3C6Q969F1 213 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 LLPHQ9BRT6 129 aaKnown RBP13.25□□□□□ -0.29
PTPN18-212ENST00000483617 PAGR1Q9BTK6 254 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 LY9Q9HBG7 655 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 RBPJLQ9UBG7 517 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 GJD2Q9UKL4 321 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 DOCK3Q8IZD9 2030 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 PLXNB2O15031 1838 aa13.25□□□□□ -0.29
PTPN18-212ENST00000483617 HMGCRP04035 888 aa13.24□□□□□ -0.29
PTPN18-212ENST00000483617 RASA1P20936 1047 aa13.24□□□□□ -0.29
PTPN18-212ENST00000483617 PDIA3P30101 505 aaKnown RBP13.24□□□□□ -0.29
PTPN18-212ENST00000483617 MAPK4P31152 587 aa13.24□□□□□ -0.29
PTPN18-212ENST00000483617 METAP2P50579 478 aaKnown RBP eCLIP13.24□□□□□ -0.29
PTPN18-212ENST00000483617 HMGN5P82970 282 aaKnown RBP13.24□□□□□ -0.29
PTPN18-212ENST00000483617 FAM47AQ5JRC9 791 aa13.24□□□□□ -0.29
PTPN18-212ENST00000483617 POTEEQ6S8J3 1075 aa13.24□□□□□ -0.29
PTPN18-212ENST00000483617 CATSPERGQ6ZRH7 1159 aa13.24□□□□□ -0.29
PTPN18-212ENST00000483617 TMEM179Q6ZVK1 233 aa13.24□□□□□ -0.29
PTPN18-212ENST00000483617 NECAB1Q8N987 351 aa13.24□□□□□ -0.29
PTPN18-212ENST00000483617 ZKSCAN3Q9BRR0 538 aa13.24□□□□□ -0.29
PTPN18-212ENST00000483617 KAT14Q9H8E8 782 aa13.24□□□□□ -0.29
PTPN18-212ENST00000483617 PAK6Q9NQU5 681 aaPredicted RBP13.24□□□□□ -0.29
PTPN18-212ENST00000483617 TCP11L1Q9NUJ3 509 aa13.24□□□□□ -0.29
PTPN18-212ENST00000483617 GOLGA8AA7E2F4 631 aa13.23□□□□□ -0.29
PTPN18-212ENST00000483617 SGPL1O95470 568 aa13.23□□□□□ -0.29
PTPN18-212ENST00000483617 APOA5Q6Q788 366 aa13.23□□□□□ -0.29
PTPN18-212ENST00000483617 UBE2Q1Q7Z7E8 422 aa13.23□□□□□ -0.29
PTPN18-212ENST00000483617 DGKHQ86XP1 1220 aa13.23□□□□□ -0.29
PTPN18-212ENST00000483617 ENAHQ8N8S7 591 aaPredicted RBP13.23□□□□□ -0.29
PTPN18-212ENST00000483617 FAM184AQ8NB25 1140 aa13.23□□□□□ -0.29
PTPN18-212ENST00000483617 NEDD1Q8NHV4 660 aa13.23□□□□□ -0.29
PTPN18-212ENST00000483617 NUDT12Q9BQG2 462 aa13.23□□□□□ -0.29
PTPN18-212ENST00000483617 PORCNQ9H237 461 aa13.23□□□□□ -0.29
PTPN18-212ENST00000483617 RPAP3Q9H6T3 665 aaPredicted RBP13.23□□□□□ -0.29
PTPN18-212ENST00000483617 A0A1W2PRG0 241 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 SMIM22K7EJ46 135 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 CNMDO75829 334 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 DDAH1O94760 285 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 FARP2O94887 1054 aaPredicted RBP13.22□□□□□ -0.29
PTPN18-212ENST00000483617 LARGE1O95461 756 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 AKR1B1P15121 316 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 CAPN2P17655 700 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 KIF5BP33176 963 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 CCT2P78371 535 aaKnown RBP13.22□□□□□ -0.29
PTPN18-212ENST00000483617 Q3C1V9 767 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 LBX2Q6XYB7 198 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 GPR142Q7Z601 462 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 MICU3Q86XE3 530 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
PTPN18-212ENST00000483617 ZNF654Q8IZM8 581 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 TRIB2Q92519 343 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 DEFB118Q96PH6 123 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPN18-212ENST00000483617 RABGAP1Q9Y3P9 1069 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
PTPN18-212ENST00000483617 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
PTPN18-212ENST00000483617 XRCC5P13010 732 aaKnown RBP13.21□□□□□ -0.29
PTPN18-212ENST00000483617 CYP2B6P20813 491 aa13.21□□□□□ -0.29
PTPN18-212ENST00000483617 CCNA1P78396 465 aa13.21□□□□□ -0.29
PTPN18-212ENST00000483617 ICA1Q05084 483 aa13.21□□□□□ -0.29
PTPN18-212ENST00000483617 COL9A3Q14050 684 aaPredicted RBP13.21□□□□□ -0.29
PTPN18-212ENST00000483617 SEC23AQ15436 765 aa13.21□□□□□ -0.29
PTPN18-212ENST00000483617 RTN1Q16799 776 aa13.21□□□□□ -0.29
PTPN18-212ENST00000483617 PLEKHH3Q7Z736 793 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms