RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SLC4A3P48751 1232 aa15.42■□□□□ 0.06
HDAC1-208ENST00000482310 STAT2P52630 851 aa15.42■□□□□ 0.06
HDAC1-208ENST00000482310 TROAPQ12815 778 aa15.42■□□□□ 0.06
HDAC1-208ENST00000482310 RTN1Q16799 776 aa15.42■□□□□ 0.06
HDAC1-208ENST00000482310 ASPRV1Q53RT3 343 aa15.42■□□□□ 0.06
HDAC1-208ENST00000482310 ATG4CQ96DT6 458 aa15.42■□□□□ 0.06
HDAC1-208ENST00000482310 P2RX7Q99572 595 aaKnown RBP15.42■□□□□ 0.06
HDAC1-208ENST00000482310 AGXT2Q9BYV1 514 aa15.42■□□□□ 0.06
HDAC1-208ENST00000482310 VAT1LQ9HCJ6 419 aa15.42■□□□□ 0.06
HDAC1-208ENST00000482310 MAD2L2Q9UI95 211 aa15.42■□□□□ 0.06
HDAC1-208ENST00000482310 PNMA3Q9UL41 463 aa15.42■□□□□ 0.06
HDAC1-208ENST00000482310 ZNFX1Q9P2E3 1918 aaKnown RBP15.42■□□□□ 0.06
HDAC1-208ENST00000482310 TRPA1O75762 1119 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 CALM1P0DP23 149 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 CALM2P0DP24 149 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 CALM3P0DP25 149 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 SNHG28P0DPA3 235 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 INHBEP58166 350 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 ANKRD1Q15327 319 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 SYDE2Q5VT97 1194 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 NECAB1Q8N987 351 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 PARK7Q99497 189 aaKnown RBP15.41■□□□□ 0.06
HDAC1-208ENST00000482310 SLF1Q9BQI6 1058 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 FEM1BQ9UK73 627 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 HPS5Q9UPZ3 1129 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 CTDP1Q9Y5B0 961 aaPredicted RBP15.41■□□□□ 0.06
HDAC1-208ENST00000482310 CASP8AP2Q9UKL3 1982 aa15.41■□□□□ 0.06
HDAC1-208ENST00000482310 DOCK3Q8IZD9 2030 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 SPDYE16A6NNV3 312 aaPredicted RBP15.4■□□□□ 0.06
HDAC1-208ENST00000482310 KLRF2D3W0D1 207 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 TBC1D8O95759 1140 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 TAL1P17542 331 aaPredicted RBP15.4■□□□□ 0.06
HDAC1-208ENST00000482310 PDIA3P30101 505 aaKnown RBP15.4■□□□□ 0.06
HDAC1-208ENST00000482310 CDC27P30260 824 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 HOXA7P31268 230 aaPredicted RBP15.4■□□□□ 0.06
HDAC1-208ENST00000482310 KIF5BP33176 963 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 HERVK_113P62684 666 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 CRHR2Q13324 411 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 PLS1Q14651 629 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 GPATCH4Q5T3I0 446 aaKnown RBP15.4■□□□□ 0.06
HDAC1-208ENST00000482310 CCDC174Q6PII3 467 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 NBPF11Q86T75 865 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 FANCBQ8NB91 859 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 SLKQ9H2G2 1235 aaPredicted RBP15.4■□□□□ 0.06
HDAC1-208ENST00000482310 RNF186Q9NXI6 227 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 CPA4Q9UI42 421 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 PPP1R9AQ9ULJ8 1098 aa15.4■□□□□ 0.06
HDAC1-208ENST00000482310 hCG_1642624A0A1W2PR95 340 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 PALM3A6NDB9 673 aaPredicted RBP15.39■□□□□ 0.05
HDAC1-208ENST00000482310 ADD1P35611 737 aaKnown RBP15.39■□□□□ 0.05
HDAC1-208ENST00000482310 COG2Q14746 738 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 ME3Q16798 604 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 FAM160B2Q86V87 743 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 HOMER1Q86YM7 354 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 FBXL16Q8N461 479 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 ANKRD13CQ8N6S4 541 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 CHURC1Q8WUH1 139 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 BEGAINQ9BUH8 593 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 ALDH8A1Q9H2A2 487 aaPredicted RBP15.39■□□□□ 0.05
HDAC1-208ENST00000482310 R3HDMLQ9H3Y0 253 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 ZFYVE28Q9HCC9 887 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 PRR12Q9ULL5 1215 aa15.39■□□□□ 0.05
HDAC1-208ENST00000482310 DSG3P32926 999 aa15.38■□□□□ 0.05
HDAC1-208ENST00000482310 SCRN1Q12765 414 aa15.38■□□□□ 0.05
HDAC1-208ENST00000482310 TMTC3Q6ZXV5 915 aa15.38■□□□□ 0.05
HDAC1-208ENST00000482310 REM2Q8IYK8 340 aaPredicted RBP15.38■□□□□ 0.05
HDAC1-208ENST00000482310 ADGRF4Q8IZF3 695 aa15.38■□□□□ 0.05
HDAC1-208ENST00000482310 CPXCR1Q8N123 301 aa15.38■□□□□ 0.05
HDAC1-208ENST00000482310 SRBD1Q8N5C6 995 aaKnown RBP15.38■□□□□ 0.05
HDAC1-208ENST00000482310 RBM28Q9NW13 759 aaKnown RBP15.38■□□□□ 0.05
HDAC1-208ENST00000482310 LIMCH1Q9UPQ0 1083 aa15.38■□□□□ 0.05
HDAC1-208ENST00000482310 SLC45A1Q9Y2W3 748 aa15.38■□□□□ 0.05
HDAC1-208ENST00000482310 PLXNA1Q9UIW2 1896 aa15.37■□□□□ 0.05
HDAC1-208ENST00000482310 ALDH1A1P00352 501 aa15.37■□□□□ 0.05
HDAC1-208ENST00000482310 CDC37Q16543 378 aaPredicted RBP15.37■□□□□ 0.05
HDAC1-208ENST00000482310 SLC35G1Q2M3R5 365 aa15.37■□□□□ 0.05
HDAC1-208ENST00000482310 CCDC83Q8IWF9 413 aa15.37■□□□□ 0.05
HDAC1-208ENST00000482310 PRPF38AQ8NAV1 312 aaKnown RBP15.37■□□□□ 0.05
HDAC1-208ENST00000482310 PHKBQ93100 1093 aa15.37■□□□□ 0.05
HDAC1-208ENST00000482310 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
HDAC1-208ENST00000482310 RAVER2Q9HCJ3 691 aaKnown RBP15.37■□□□□ 0.05
HDAC1-208ENST00000482310 FAM217BQ9NTX9 383 aaPredicted RBP15.37■□□□□ 0.05
HDAC1-208ENST00000482310 CCDC85CA6NKD9 419 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 VWA5AO00534 786 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 CPLX1O14810 134 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 CA12O43570 354 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 CYTH3O43739 400 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 PFKFB2O60825 505 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 ZBED4O75132 1171 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 RGS19P49795 217 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 EVCP57679 992 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 USH1GQ495M9 461 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 POTEEQ6S8J3 1075 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 PIGSQ96S52 555 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 MAP3K14Q99558 947 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 TXNRD2Q9NNW7 524 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 ZCCHC17Q9NP64 241 aaKnown RBP15.36■□□□□ 0.05
HDAC1-208ENST00000482310 HOMER2Q9NSB8 354 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 HOXC10Q9NYD6 342 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 BTBD7Q9P203 1132 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms