RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SNRNP48Q6IEG0 339 aaKnown RBP15.97■□□□□ 0.15
CTDSP1-208ENST00000482272 TICAM2Q86XR7 235 aa15.97■□□□□ 0.15
CTDSP1-208ENST00000482272 CPXCR1Q8N123 301 aa15.97■□□□□ 0.15
CTDSP1-208ENST00000482272 GMCL1P1Q8NEA9 526 aa15.97■□□□□ 0.15
CTDSP1-208ENST00000482272 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
CTDSP1-208ENST00000482272 TINF2Q9BSI4 451 aa15.97■□□□□ 0.15
CTDSP1-208ENST00000482272 HELLSQ9NRZ9 838 aa15.97■□□□□ 0.15
CTDSP1-208ENST00000482272 PLIN4Q96Q06 1357 aa15.97■□□□□ 0.15
CTDSP1-208ENST00000482272 A0A0D9SFI3 127 aa15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 ATP2A1O14983 1001 aa15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 FDX1P10109 184 aa15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 BMP3P12645 472 aa15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 ANO1Q5XXA6 986 aa15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 SLFN13Q68D06 897 aa15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 RASGRP2Q7LDG7 609 aa15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 KIFC2Q96AC6 838 aa15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 FAM227BQ96M60 508 aa15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 LNPKQ9C0E8 428 aa15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 RWDD1Q9H446 243 aaPredicted RBP15.96■□□□□ 0.15
CTDSP1-208ENST00000482272 TSPY2A6NKD2 308 aa15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 MAGEA10P43363 369 aaPredicted RBP15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 CTDSPL2Q05D32 466 aa15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 SMC5Q8IY18 1101 aa15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 LRRC47Q8N1G4 583 aaKnown RBP15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 MSL3Q8N5Y2 521 aaKnown RBP15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 UBE2OQ9C0C9 1292 aaKnown RBP15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 PRKAG2Q9UGJ0 569 aa15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 CNPY2Q9Y2B0 182 aa15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 RIPK3Q9Y572 518 aa15.95■□□□□ 0.14
CTDSP1-208ENST00000482272 TMEM232C9JQI7 657 aa15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 RARBP10826 455 aa15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 OAZ1P54368 228 aa15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 MCMDC2Q4G0Z9 681 aa15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 B4GALNT3Q6L9W6 998 aa15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 ZNF589Q86UQ0 364 aaPredicted RBP15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 CHURC1Q8WUH1 139 aa15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 SLC38A10Q9HBR0 1119 aa15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 RAVER2Q9HCJ3 691 aaKnown RBP15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 FBXO40Q9UH90 709 aa15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 ISY1Q9ULR0 285 aaKnown RBP15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 STX8Q9UNK0 236 aa15.94■□□□□ 0.14
CTDSP1-208ENST00000482272 TRIM6-TRIM34B2RNG4 842 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 RANBP6O60518 1105 aaKnown RBP15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 NMT2O60551 498 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 SLC1A4P43007 532 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 LRRC41Q15345 812 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 ALX1Q15699 326 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 SLC39A5Q6ZMH5 540 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 FAM160B2Q86V87 743 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 TDHQ8IZJ6 230 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 ANKRD35Q8N283 1001 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 CHST13Q8NET6 341 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 STAG1Q8WVM7 1258 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 LBHD1Q9BQE6 289 aaPredicted RBP15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 IL17RBQ9NRM6 502 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 ANAPC4Q9UJX5 808 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 DNAH12Q6ZR08 3092 aa15.93■□□□□ 0.14
CTDSP1-208ENST00000482272 AKR1A1P14550 325 aa15.92■□□□□ 0.14
CTDSP1-208ENST00000482272 ADCYAP1R1P41586 468 aa15.92■□□□□ 0.14
CTDSP1-208ENST00000482272 STAT2P52630 851 aa15.92■□□□□ 0.14
CTDSP1-208ENST00000482272 RTP1P59025 263 aa15.92■□□□□ 0.14
CTDSP1-208ENST00000482272 IKQ13123 557 aaPredicted RBP15.92■□□□□ 0.14
CTDSP1-208ENST00000482272 RNF180Q86T96 592 aa15.92■□□□□ 0.14
CTDSP1-208ENST00000482272 CHMP4CQ96CF2 233 aa15.92■□□□□ 0.14
CTDSP1-208ENST00000482272 XPNPEP3Q9NQH7 507 aa15.92■□□□□ 0.14
CTDSP1-208ENST00000482272 LAMA3Q16787 3333 aa15.92■□□□□ 0.14
CTDSP1-208ENST00000482272 LAMA4Q16363 1823 aa15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 ZNF865P0CJ78 1059 aaPredicted RBP15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 MCCP23508 829 aa15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 MDM2Q00987 491 aaPredicted RBP15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 NMIQ13287 307 aaPredicted RBP15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 RCSD1Q6JBY9 416 aa15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 MAMDC4Q6UXC1 1216 aa15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 ZNF467Q7Z7K2 595 aaPredicted RBP15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 PLEKHM2Q8IWE5 1019 aa15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 RILPL2Q969X0 211 aa15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 GMCL1Q96IK5 515 aa15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 TOMM22Q9NS69 142 aa15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 ATP11BQ9Y2G3 1177 aa15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 TRIOBPQ9H2D6 2365 aa15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 SYNGAP1Q96PV0 1343 aa15.91■□□□□ 0.14
CTDSP1-208ENST00000482272 LCTP09848 1927 aa15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 LTBP2Q14767 1821 aa15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 DNAJC25-GNG10A0A024R161 153 aa15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 SOX1O00570 391 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 ORC4O43929 436 aa15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 PLA2G6O60733 806 aa15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 FGAP02671 866 aa15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 FGRP09769 529 aa15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 TAL1P17542 331 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 LRIT3Q3SXY7 679 aa15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 FERMT2Q96AC1 680 aa15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 LRCH3Q96II8 777 aa15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 FAM184BQ9ULE4 1060 aa15.9■□□□□ 0.14
CTDSP1-208ENST00000482272 SMCHD1A6NHR9 2005 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms