RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 DNM1LO00429 736 aa22.06■■□□□ 1.12
CLK1-211ENST00000481641 TAL1P17542 331 aaPredicted RBP22.06■■□□□ 1.12
CLK1-211ENST00000481641 SLFN13Q68D06 897 aa22.06■■□□□ 1.12
CLK1-211ENST00000481641 B4GALNT3Q6L9W6 998 aa22.06■■□□□ 1.12
CLK1-211ENST00000481641 FAM227BQ96M60 508 aa22.06■■□□□ 1.12
CLK1-211ENST00000481641 TEX13BQ9BXU2 312 aa22.06■■□□□ 1.12
CLK1-211ENST00000481641 RAVER2Q9HCJ3 691 aaKnown RBP22.06■■□□□ 1.12
CLK1-211ENST00000481641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.06■■□□□ 1.12
CLK1-211ENST00000481641 PLIN4Q96Q06 1357 aa22.06■■□□□ 1.12
CLK1-211ENST00000481641 A0A0D9SFI3 127 aa22.05■■□□□ 1.12
CLK1-211ENST00000481641 NMT2O60551 498 aa22.05■■□□□ 1.12
CLK1-211ENST00000481641 ZBED4O75132 1171 aa22.05■■□□□ 1.12
CLK1-211ENST00000481641 GMCL1P1Q8NEA9 526 aa22.05■■□□□ 1.12
CLK1-211ENST00000481641 A0A1W2PPC1 479 aa22.04■■□□□ 1.12
CLK1-211ENST00000481641 BMP3P12645 472 aa22.04■■□□□ 1.12
CLK1-211ENST00000481641 BMP8BP34820 402 aa22.04■■□□□ 1.12
CLK1-211ENST00000481641 COPB2P35606 906 aa22.04■■□□□ 1.12
CLK1-211ENST00000481641 LRCH3Q96II8 777 aa22.04■■□□□ 1.12
CLK1-211ENST00000481641 TINF2Q9BSI4 451 aa22.04■■□□□ 1.12
CLK1-211ENST00000481641 HELLSQ9NRZ9 838 aa22.04■■□□□ 1.12
CLK1-211ENST00000481641 FEM1BQ9UK73 627 aa22.04■■□□□ 1.12
CLK1-211ENST00000481641 ISY1Q9ULR0 285 aaKnown RBP22.04■■□□□ 1.12
CLK1-211ENST00000481641 CTDP1Q9Y5B0 961 aaPredicted RBP22.04■■□□□ 1.12
CLK1-211ENST00000481641 LAMA3Q16787 3333 aa22.04■■□□□ 1.12
CLK1-211ENST00000481641 IGHDP01880 384 aa22.03■■□□□ 1.12
CLK1-211ENST00000481641 ARRDC4Q8NCT1 418 aa22.03■■□□□ 1.12
CLK1-211ENST00000481641 EXOC6Q8TAG9 804 aa22.03■■□□□ 1.12
CLK1-211ENST00000481641 SLC38A10Q9HBR0 1119 aa22.03■■□□□ 1.12
CLK1-211ENST00000481641 IL17RBQ9NRM6 502 aa22.03■■□□□ 1.12
CLK1-211ENST00000481641 DIS3Q9Y2L1 958 aaKnown RBP22.03■■□□□ 1.12
CLK1-211ENST00000481641 TSPY2A6NKD2 308 aa22.02■■□□□ 1.12
CLK1-211ENST00000481641 TMEM232C9JQI7 657 aa22.02■■□□□ 1.12
CLK1-211ENST00000481641 MCCP23508 829 aa22.02■■□□□ 1.12
CLK1-211ENST00000481641 RTP1P59025 263 aa22.02■■□□□ 1.12
CLK1-211ENST00000481641 MDM2Q00987 491 aaPredicted RBP22.02■■□□□ 1.12
CLK1-211ENST00000481641 NMIQ13287 307 aaPredicted RBP22.02■■□□□ 1.12
CLK1-211ENST00000481641 LRRC41Q15345 812 aa22.02■■□□□ 1.12
CLK1-211ENST00000481641 RASGRP2Q7LDG7 609 aa22.02■■□□□ 1.12
CLK1-211ENST00000481641 DDX11Q96FC9 970 aa22.02■■□□□ 1.12
CLK1-211ENST00000481641 SYNPO2Q9UMS6 1093 aa22.02■■□□□ 1.12
CLK1-211ENST00000481641 TRIM6-TRIM34B2RNG4 842 aa22.01■■□□□ 1.11
CLK1-211ENST00000481641 KBTBD13C9JR72 458 aa22.01■■□□□ 1.11
CLK1-211ENST00000481641 ATP2A1O14983 1001 aa22.01■■□□□ 1.11
CLK1-211ENST00000481641 RANBP6O60518 1105 aaKnown RBP22.01■■□□□ 1.11
CLK1-211ENST00000481641 ZNF865P0CJ78 1059 aaPredicted RBP22.01■■□□□ 1.11
CLK1-211ENST00000481641 MCMDC2Q4G0Z9 681 aa22.01■■□□□ 1.11
CLK1-211ENST00000481641 ZNF589Q86UQ0 364 aaPredicted RBP22.01■■□□□ 1.11
CLK1-211ENST00000481641 SMC5Q8IY18 1101 aa22.01■■□□□ 1.11
CLK1-211ENST00000481641 RILPL2Q969X0 211 aa22.01■■□□□ 1.11
CLK1-211ENST00000481641 FERMT2Q96AC1 680 aa22.01■■□□□ 1.11
CLK1-211ENST00000481641 LENG1Q96BZ8 264 aaPredicted RBP22.01■■□□□ 1.11
CLK1-211ENST00000481641 UBE2OQ9C0C9 1292 aaKnown RBP22.01■■□□□ 1.11
CLK1-211ENST00000481641 RWDD1Q9H446 243 aaPredicted RBP22.01■■□□□ 1.11
CLK1-211ENST00000481641 ANAPC4Q9UJX5 808 aa22.01■■□□□ 1.11
CLK1-211ENST00000481641 STX8Q9UNK0 236 aa22.01■■□□□ 1.11
CLK1-211ENST00000481641 MTMR7Q9Y216 660 aa22.01■■□□□ 1.11
CLK1-211ENST00000481641 FGAP02671 866 aa22■■□□□ 1.11
CLK1-211ENST00000481641 ADCYAP1R1P41586 468 aa22■■□□□ 1.11
CLK1-211ENST00000481641 ALX1Q15699 326 aa22■■□□□ 1.11
CLK1-211ENST00000481641 KCTD1Q719H9 257 aa22■■□□□ 1.11
CLK1-211ENST00000481641 HOMER2Q9NSB8 354 aa22■■□□□ 1.11
CLK1-211ENST00000481641 NRBP1Q9UHY1 535 aa22■■□□□ 1.11
CLK1-211ENST00000481641 ATP11BQ9Y2G3 1177 aa22■■□□□ 1.11
CLK1-211ENST00000481641 DNAJC25-GNG10A0A024R161 153 aa21.99■■□□□ 1.11
CLK1-211ENST00000481641 PGK1P00558 417 aa21.99■■□□□ 1.11
CLK1-211ENST00000481641 SLC1A4P43007 532 aa21.99■■□□□ 1.11
CLK1-211ENST00000481641 SNAP25P60880 206 aa21.99■■□□□ 1.11
CLK1-211ENST00000481641 IKQ13123 557 aaPredicted RBP21.99■■□□□ 1.11
CLK1-211ENST00000481641 SLC39A5Q6ZMH5 540 aa21.99■■□□□ 1.11
CLK1-211ENST00000481641 XPNPEP3Q9NQH7 507 aa21.99■■□□□ 1.11
CLK1-211ENST00000481641 SNAI1O95863 264 aaPredicted RBP21.98■■□□□ 1.11
CLK1-211ENST00000481641 HSPD1P10809 573 aaKnown RBP21.98■■□□□ 1.11
CLK1-211ENST00000481641 RARBP10826 455 aa21.98■■□□□ 1.11
CLK1-211ENST00000481641 AAMPQ13685 434 aa21.98■■□□□ 1.11
CLK1-211ENST00000481641 RRP12Q5JTH9 1297 aaKnown RBP21.98■■□□□ 1.11
CLK1-211ENST00000481641 CHD1LQ86WJ1 897 aa21.98■■□□□ 1.11
CLK1-211ENST00000481641 PLEKHM2Q8IWE5 1019 aa21.98■■□□□ 1.11
CLK1-211ENST00000481641 ANKRD35Q8N283 1001 aa21.98■■□□□ 1.11
CLK1-211ENST00000481641 STAG1Q8WVM7 1258 aa21.98■■□□□ 1.11
CLK1-211ENST00000481641 GMCL1Q96IK5 515 aa21.98■■□□□ 1.11
CLK1-211ENST00000481641 AGBL1Q96MI9 1066 aa21.98■■□□□ 1.11
CLK1-211ENST00000481641 TOMM22Q9NS69 142 aa21.98■■□□□ 1.11
CLK1-211ENST00000481641 CNPY2Q9Y2B0 182 aa21.98■■□□□ 1.11
CLK1-211ENST00000481641 ORC4O43929 436 aa21.97■■□□□ 1.11
CLK1-211ENST00000481641 STAT2P52630 851 aa21.97■■□□□ 1.11
CLK1-211ENST00000481641 HAND2P61296 217 aa21.97■■□□□ 1.11
CLK1-211ENST00000481641 TDHQ8IZJ6 230 aa21.97■■□□□ 1.11
CLK1-211ENST00000481641 CHURC1Q8WUH1 139 aa21.97■■□□□ 1.11
CLK1-211ENST00000481641 FGD4Q96M96 766 aa21.97■■□□□ 1.11
CLK1-211ENST00000481641 MCM3APO60318 1980 aa21.96■■□□□ 1.11
CLK1-211ENST00000481641 FGRP09769 529 aa21.96■■□□□ 1.11
CLK1-211ENST00000481641 AKR1A1P14550 325 aa21.96■■□□□ 1.11
CLK1-211ENST00000481641 OAZ1P54368 228 aa21.96■■□□□ 1.11
CLK1-211ENST00000481641 NUCB1Q02818 461 aa21.96■■□□□ 1.11
CLK1-211ENST00000481641 TRIM60Q495X7 471 aa21.96■■□□□ 1.11
CLK1-211ENST00000481641 RCSD1Q6JBY9 416 aa21.96■■□□□ 1.11
CLK1-211ENST00000481641 FAM160B2Q86V87 743 aa21.96■■□□□ 1.11
CLK1-211ENST00000481641 CHST13Q8NET6 341 aa21.96■■□□□ 1.11
CLK1-211ENST00000481641 ZHX1Q9UKY1 873 aaPredicted RBP21.96■■□□□ 1.11
CLK1-211ENST00000481641 ZNF536O15090 1300 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms