RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 DIRC2Q96SL1 478 aa5.81□□□□□ -1.48
CBX3-207ENST00000481300 GPR62Q9BZJ7 368 aa5.81□□□□□ -1.48
CBX3-207ENST00000481300 TRIT1Q9H3H1 467 aaKnown RBP5.81□□□□□ -1.48
CBX3-207ENST00000481300 KCNK12Q9HB15 430 aa5.81□□□□□ -1.48
CBX3-207ENST00000481300 SP110Q9HB58 689 aa5.81□□□□□ -1.48
CBX3-207ENST00000481300 HPXP02790 462 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 RAP1GAPP47736 663 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 GNPTABQ3T906 1256 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 FBLN7Q53RD9 439 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 VHLLQ6RSH7 139 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 DPH6Q7L8W6 267 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 TSPYL5Q86VY4 417 aaPredicted RBP5.8□□□□□ -1.48
CBX3-207ENST00000481300 C1QL4Q86Z23 238 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 RNF141Q8WVD5 230 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 KREMEN1Q96MU8 473 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 PPP1R16BQ96T49 567 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 LNPKQ9C0E8 428 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 MKRN2Q9H000 416 aaKnown RBP5.8□□□□□ -1.48
CBX3-207ENST00000481300 OSBPL2Q9H1P3 480 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 NSUN3Q9H649 340 aaKnown RBP5.8□□□□□ -1.48
CBX3-207ENST00000481300 ST7Q9NRC1 585 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 GPATCH2Q9NW75 528 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 SIRPGQ9P1W8 387 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 SUCOQ9UBS9 1254 aaKnown RBP5.8□□□□□ -1.48
CBX3-207ENST00000481300 DUSP13Q9UII6 198 aa5.8□□□□□ -1.48
CBX3-207ENST00000481300 LTBP3Q9NS15 1303 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 RAC2P15153 192 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 CFPP27918 469 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 TRHRP34981 398 aaPredicted RBP5.79□□□□□ -1.48
CBX3-207ENST00000481300 PMS1P54277 932 aaKnown RBP5.79□□□□□ -1.48
CBX3-207ENST00000481300 SLC7A5Q01650 507 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 NCAPHQ15003 741 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 DDR2Q16832 855 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 TMEM192Q8IY95 271 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 MYLIPQ8WY64 445 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 SMARCC1Q92922 1105 aaPredicted RBP5.79□□□□□ -1.48
CBX3-207ENST00000481300 ASPNQ9BXN1 380 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 ZSWIM4Q9H7M6 989 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 ZNF214Q9UL59 606 aaPredicted RBP5.79□□□□□ -1.48
CBX3-207ENST00000481300 KCNH3Q9ULD8 1083 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 PCDHB10Q9UN67 800 aa5.79□□□□□ -1.48
CBX3-207ENST00000481300 CCDC85CA6NKD9 419 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 TP53P04637 393 aaPredicted RBP5.78□□□□□ -1.48
CBX3-207ENST00000481300 ZGLP1P0C6A0 271 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 C1QTNF9P0C862 333 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 EGR3Q06889 387 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 NFE2L2Q16236 605 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 CCDC144BQ3MJ40 725 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 TDRD10Q5VZ19 366 aaKnown RBP5.78□□□□□ -1.48
CBX3-207ENST00000481300 KIAA1211LQ6NV74 962 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 C6orf15Q6UXA7 325 aaPredicted RBP5.78□□□□□ -1.48
CBX3-207ENST00000481300 FAM178BQ8IXR5 827 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 CCDC144CPQ8IYA2 1237 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 CELF2-AS1Q8N7Q2 184 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 FBXO15Q8NCQ5 510 aaPredicted RBP5.78□□□□□ -1.48
CBX3-207ENST00000481300 ZNF512BQ96KM6 892 aaPredicted RBP5.78□□□□□ -1.48
CBX3-207ENST00000481300 FAM86C1Q9NVL1 165 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 PCDHA11Q9Y5I1 949 aa5.78□□□□□ -1.48
CBX3-207ENST00000481300 SHISA3A0PJX4 238 aa5.77□□□□□ -1.49
CBX3-207ENST00000481300 GJB6O95452 261 aa5.77□□□□□ -1.49
CBX3-207ENST00000481300 BMS1Q14692 1282 aaKnown RBP5.77□□□□□ -1.49
CBX3-207ENST00000481300 NBPF12Q5TAG4 269 aaPredicted RBP5.77□□□□□ -1.49
CBX3-207ENST00000481300 VWCEQ96DN2 955 aa5.77□□□□□ -1.49
CBX3-207ENST00000481300 SRPK1Q96SB4 655 aaKnown RBP5.77□□□□□ -1.49
CBX3-207ENST00000481300 RNF32Q9H0A6 362 aa5.77□□□□□ -1.49
CBX3-207ENST00000481300 C19orf44Q9H6X5 657 aa5.77□□□□□ -1.49
CBX3-207ENST00000481300 DCP1AQ9NPI6 582 aaPredicted RBP5.77□□□□□ -1.49
CBX3-207ENST00000481300 B2RBV5 119 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 NAT2P11245 290 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 LTKP29376 864 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 SERINC3Q13530 473 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 TIGD5Q53EQ6 642 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 HEATR6Q6AI08 1181 aaKnown RBP5.76□□□□□ -1.49
CBX3-207ENST00000481300 LCNL1Q6ZST4 164 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 EEPD1Q7L9B9 569 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 LRRC56Q8IYG6 542 aaPredicted RBP5.76□□□□□ -1.49
CBX3-207ENST00000481300 PDZD8Q8NEN9 1154 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 MICAL1Q8TDZ2 1067 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 MKL1Q969V6 931 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 MRFAP1L1Q96HT8 127 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 TOX2Q96NM4 488 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 ASCC2Q9H1I8 757 aaPredicted RBP5.76□□□□□ -1.49
CBX3-207ENST00000481300 EPB41L4BQ9H329 900 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 FBXL21Q9UKT6 434 aa5.76□□□□□ -1.49
CBX3-207ENST00000481300 C9IYK1 514 aa5.75□□□□□ -1.49
CBX3-207ENST00000481300 TEKQ02763 1124 aa5.75□□□□□ -1.49
CBX3-207ENST00000481300 TCEAL1Q15170 157 aa5.75□□□□□ -1.49
CBX3-207ENST00000481300 PPFIBP1Q86W92 1011 aa5.75□□□□□ -1.49
CBX3-207ENST00000481300 ANKLE2Q86XL3 938 aa5.75□□□□□ -1.49
CBX3-207ENST00000481300 KLHL6Q8WZ60 621 aa5.75□□□□□ -1.49
CBX3-207ENST00000481300 DEPDC7Q96QD5 511 aa5.75□□□□□ -1.49
CBX3-207ENST00000481300 HAUS7Q99871 368 aa5.75□□□□□ -1.49
CBX3-207ENST00000481300 EBF1Q9UH73 591 aa5.75□□□□□ -1.49
CBX3-207ENST00000481300 CDK11AQ9UQ88 783 aaPredicted RBP5.75□□□□□ -1.49
CBX3-207ENST00000481300 PCDHB12Q9Y5F1 795 aa5.75□□□□□ -1.49
CBX3-207ENST00000481300 NFIBO00712 420 aa5.74□□□□□ -1.49
CBX3-207ENST00000481300 PDPK1O15530 556 aa5.74□□□□□ -1.49
CBX3-207ENST00000481300 MED14OSP0DP75 135 aa5.74□□□□□ -1.49
CBX3-207ENST00000481300 IFRD2Q12894 506 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms