RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
GPNMB-211ENST00000479625 COL4A4P53420 1690 aaPredicted RBP11.84□□□□□ -0.51
GPNMB-211ENST00000479625 MPHOSPH10O00566 681 aaKnown RBP11.83□□□□□ -0.52
GPNMB-211ENST00000479625 ADAMTS4O75173 837 aa11.83□□□□□ -0.52
GPNMB-211ENST00000479625 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
GPNMB-211ENST00000479625 PGK2P07205 417 aa11.83□□□□□ -0.52
GPNMB-211ENST00000479625 GNAI3P08754 354 aa11.83□□□□□ -0.52
GPNMB-211ENST00000479625 G3BP1Q13283 466 aaKnown RBP eCLIP11.83□□□□□ -0.52
GPNMB-211ENST00000479625 CCDC158Q5M9N0 1113 aa11.83□□□□□ -0.52
GPNMB-211ENST00000479625 C16orf59Q7L2K0 433 aa11.83□□□□□ -0.52
GPNMB-211ENST00000479625 RNF180Q86T96 592 aa11.83□□□□□ -0.52
GPNMB-211ENST00000479625 MAGEB6Q8N7X4 407 aa11.83□□□□□ -0.52
GPNMB-211ENST00000479625 MROH8Q9H579 483 aa11.83□□□□□ -0.52
GPNMB-211ENST00000479625 SYNRGQ9UMZ2 1314 aa11.83□□□□□ -0.52
GPNMB-211ENST00000479625 MYADML2A6NDP7 307 aa11.82□□□□□ -0.52
GPNMB-211ENST00000479625 ACRP10323 421 aa11.82□□□□□ -0.52
GPNMB-211ENST00000479625 AKNAD1Q5T1N1 836 aa11.82□□□□□ -0.52
GPNMB-211ENST00000479625 ANKRD33Q7Z3H0 272 aa11.82□□□□□ -0.52
GPNMB-211ENST00000479625 SPICE1Q8N0Z3 855 aa11.82□□□□□ -0.52
GPNMB-211ENST00000479625 STARD7Q9NQZ5 370 aa11.82□□□□□ -0.52
GPNMB-211ENST00000479625 SLC5A4Q9NY91 659 aa11.82□□□□□ -0.52
GPNMB-211ENST00000479625 TBX21Q9UL17 535 aa11.82□□□□□ -0.52
GPNMB-211ENST00000479625 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
GPNMB-211ENST00000479625 MYH7P12883 1935 aa11.82□□□□□ -0.52
GPNMB-211ENST00000479625 ZNF316A6NFI3 1004 aaPredicted RBP11.81□□□□□ -0.52
GPNMB-211ENST00000479625 FLOT1O75955 427 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 TIMP1P01033 207 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 ZNF865P0CJ78 1059 aaPredicted RBP11.81□□□□□ -0.52
GPNMB-211ENST00000479625 FCER1AP12319 257 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 CSF2RAP15509 400 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 IGFBP4P22692 258 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 ACLYP53396 1101 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 MRPS5P82675 430 aaKnown RBP11.81□□□□□ -0.52
GPNMB-211ENST00000479625 MMRN1Q13201 1228 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 TMEM132BQ14DG7 1078 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 TMEM240Q5SV17 173 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 RASIP1Q5U651 963 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 TTC6Q86TZ1 520 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 ABRAQ8N0Z2 381 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 MMP19Q99542 508 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 TINF2Q9BSI4 451 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 PPP1R12CQ9BZL4 782 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 ANTXR1Q9H6X2 564 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 HOXC10Q9NYD6 342 aa11.81□□□□□ -0.52
GPNMB-211ENST00000479625 DBNLQ9UJU6 430 aaKnown RBP11.81□□□□□ -0.52
GPNMB-211ENST00000479625 GREB1LQ9C091 1923 aaPredicted RBP11.81□□□□□ -0.52
GPNMB-211ENST00000479625 DCDC2CA8MYV0 355 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 GNAI2P04899 355 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 AKR1A1P14550 325 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 TFF2Q03403 129 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 GABPAQ06546 454 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 MFSD5Q6N075 450 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 PLPP6Q8IY26 295 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 MICALL1Q8N3F8 863 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 IL27Q8NEV9 243 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 NKX2-4Q9H2Z4 354 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 GPR108Q9NPR9 543 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 FBXO28Q9NVF7 368 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 MYH4Q9Y623 1939 aa11.8□□□□□ -0.52
GPNMB-211ENST00000479625 SCN5AQ14524 2016 aa11.79□□□□□ -0.52
GPNMB-211ENST00000479625 APBB1O00213 710 aa11.79□□□□□ -0.52
GPNMB-211ENST00000479625 ADCY6O43306 1168 aa11.79□□□□□ -0.52
GPNMB-211ENST00000479625 POLR3DP05423 398 aaPredicted RBP11.79□□□□□ -0.52
GPNMB-211ENST00000479625 CYP2D6P10635 497 aa11.79□□□□□ -0.52
GPNMB-211ENST00000479625 PPIGQ13427 754 aaKnown RBP eCLIP11.79□□□□□ -0.52
GPNMB-211ENST00000479625 OS9Q13438 667 aaPredicted RBP11.79□□□□□ -0.52
GPNMB-211ENST00000479625 DSG2Q14126 1118 aa11.79□□□□□ -0.52
GPNMB-211ENST00000479625 ZNF792Q3KQV3 632 aa11.79□□□□□ -0.52
GPNMB-211ENST00000479625 ZNF365Q70YC5 407 aa11.79□□□□□ -0.52
GPNMB-211ENST00000479625 ZNF512BQ96KM6 892 aaPredicted RBP11.79□□□□□ -0.52
GPNMB-211ENST00000479625 TOX2Q96NM4 488 aa11.79□□□□□ -0.52
GPNMB-211ENST00000479625 RIOK1Q9BRS2 568 aaKnown RBP11.79□□□□□ -0.52
GPNMB-211ENST00000479625 CCDC8Q9H0W5 538 aaPredicted RBP11.79□□□□□ -0.52
GPNMB-211ENST00000479625 GPHNQ9NQX3 736 aaPredicted RBP11.79□□□□□ -0.52
GPNMB-211ENST00000479625 CXXC1Q9P0U4 656 aaPredicted RBP11.79□□□□□ -0.52
GPNMB-211ENST00000479625 NRBP1Q9UHY1 535 aa11.79□□□□□ -0.52
GPNMB-211ENST00000479625 YBX2Q9Y2T7 364 aaKnown RBP11.79□□□□□ -0.52
GPNMB-211ENST00000479625 PTPRSQ13332 1948 aa11.79□□□□□ -0.52
GPNMB-211ENST00000479625 KCNQ1P51787 676 aa11.78□□□□□ -0.52
GPNMB-211ENST00000479625 FOXK1P85037 733 aa11.78□□□□□ -0.52
GPNMB-211ENST00000479625 KCNA10Q16322 511 aa11.78□□□□□ -0.52
GPNMB-211ENST00000479625 CCSAPQ6IQ19 270 aaPredicted RBP11.78□□□□□ -0.52
GPNMB-211ENST00000479625 SIAH1Q8IUQ4 282 aa11.78□□□□□ -0.52
GPNMB-211ENST00000479625 TRMT2AQ8IZ69 625 aaKnown RBP11.78□□□□□ -0.52
GPNMB-211ENST00000479625 KLHDC9Q8NEP7 349 aa11.78□□□□□ -0.52
GPNMB-211ENST00000479625 TSEN34Q9BSV6 310 aaKnown RBP11.78□□□□□ -0.52
GPNMB-211ENST00000479625 ZHX1Q9UKY1 873 aaPredicted RBP11.78□□□□□ -0.52
GPNMB-211ENST00000479625 TANC1Q9C0D5 1861 aa11.78□□□□□ -0.52
GPNMB-211ENST00000479625 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 SMIM22K7EJ46 135 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 GTPBP6O43824 516 aaPredicted RBP11.77□□□□□ -0.53
GPNMB-211ENST00000479625 AKR1B1P15121 316 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 CYP2C18P33260 490 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 RARSP54136 660 aaKnown RBP11.77□□□□□ -0.53
GPNMB-211ENST00000479625 ICA1Q05084 483 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 KCTD2Q14681 263 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 PSRC1Q6PGN9 363 aaPredicted RBP11.77□□□□□ -0.53
GPNMB-211ENST00000479625 TMEM179Q6ZVK1 233 aa11.77□□□□□ -0.53
GPNMB-211ENST00000479625 CERS3Q8IU89 383 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms