RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-210	ENST00000479295	CHURC1	Q8WUH1	139 aa		11.45	□□□□□ -0.58
PTPN18-210	ENST00000479295	TRIB2	Q92519	343 aa		11.45	□□□□□ -0.58
PTPN18-210	ENST00000479295	TEX13B	Q9BXU2	312 aa		11.45	□□□□□ -0.58
PTPN18-210	ENST00000479295	TOMM22	Q9NS69	142 aa		11.45	□□□□□ -0.58
PTPN18-210	ENST00000479295	TMEM232	C9JQI7	657 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	EPB41L2	O43491	1005 aa	Known RBP	11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	CAPN15	O75808	1086 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	ECM2	O94769	699 aa	Predicted RBP	11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	HMGCR	P04035	888 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	INHA	P05111	366 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	STAT2	P52630	851 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	UBXN2A	P68543	259 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	MTFR1	Q15390	333 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	CYB5R4	Q7L1T6	521 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	RASGRP2	Q7LDG7	609 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	KCNB2	Q92953	911 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	APBA2	Q99767	749 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	PAK6	Q9NQU5	681 aa	Predicted RBP	11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	PRR12	Q9ULL5	1215 aa		11.44	□□□□□ -0.58
PTPN18-210	ENST00000479295	TNKS	O95271	1327 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	POTEF	A5A3E0	1075 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	SLC27A2	O14975	620 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	ZBED4	O75132	1171 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	GJB1	P08034	283 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	ELN	P15502	786 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	CYP2B6	P20813	491 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	SOX10	P56693	466 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	ZNF543	Q08ER8	600 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	KIAA1211	Q6ZU35	1233 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	NCOA7	Q8NI08	942 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	NPLOC4	Q8TAT6	608 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	ZKSCAN3	Q9BRR0	538 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	RANBP17	Q9H2T7	1088 aa	Known RBP	11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	DIS3	Q9Y2L1	958 aa	Known RBP	11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	RIPK3	Q9Y572	518 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	CENPF	P49454	3210 aa		11.43	□□□□□ -0.58
PTPN18-210	ENST00000479295	DNAJC25-GNG10	A0A024R161	153 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	RAD21	O60216	631 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	COBL	O75128	1261 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	CCL5	P13501	91 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	ADORA2A	P29274	412 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	GJA8	P48165	433 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	ANTXR2	P58335	489 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	TRDN	Q13061	729 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	ZNF792	Q3KQV3	632 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	TKFC	Q3LXA3	575 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	GPATCH4	Q5T3I0	446 aa	Known RBP	11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	OLFML2B	Q68BL8	750 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	CREB3L3	Q68CJ9	461 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	TTBK2	Q6IQ55	1244 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	KCTD1	Q719H9	257 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	UBE2Q1	Q7Z7E8	422 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	CCAR1	Q8IX12	1150 aa	Known RBP	11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	PNMA1	Q8ND90	353 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	CHST13	Q8NET6	341 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	IGDCC4	Q8TDY8	1250 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	KIFC2	Q96AC6	838 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	SHISA4	Q96DD7	197 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	CRISPLD2	Q9H0B8	497 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	FLRT1	Q9NZU1	646 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	IVNS1ABP	Q9Y6Y0	642 aa		11.42	□□□□□ -0.58
PTPN18-210	ENST00000479295	RPTOR	Q8N122	1335 aa		11.41	□□□□□ -0.58
PTPN18-210	ENST00000479295	FCER1A	P12319	257 aa		11.41	□□□□□ -0.58
PTPN18-210	ENST00000479295	TRIM32	Q13049	653 aa		11.41	□□□□□ -0.58
PTPN18-210	ENST00000479295	CCL14	Q16627	93 aa		11.41	□□□□□ -0.58
PTPN18-210	ENST00000479295	SNRNP48	Q6IEG0	339 aa	Known RBP	11.41	□□□□□ -0.58
PTPN18-210	ENST00000479295	NCAPG2	Q86XI2	1143 aa		11.41	□□□□□ -0.58
PTPN18-210	ENST00000479295	TMEM106C	Q9BVX2	250 aa		11.41	□□□□□ -0.58
PTPN18-210	ENST00000479295	UNC93B1	Q9H1C4	597 aa		11.41	□□□□□ -0.58
PTPN18-210	ENST00000479295	RAVER2	Q9HCJ3	691 aa	Known RBP	11.41	□□□□□ -0.58
PTPN18-210	ENST00000479295	ANO2	Q9NQ90	1003 aa		11.41	□□□□□ -0.58
PTPN18-210	ENST00000479295	KIAA0100	Q14667	2235 aa	Known RBP	11.41	□□□□□ -0.58
PTPN18-210	ENST00000479295	WDR19	Q8NEZ3	1342 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	PALM3	A6NDB9	673 aa	Predicted RBP	11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	SGPL1	O95470	568 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	ICAM1	P05362	532 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	ZKSCAN1	P17029	563 aa	Predicted RBP	11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	CACNB2	Q08289	660 aa	Predicted RBP	11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	TROAP	Q12815	778 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	COL9A3	Q14050	684 aa	Predicted RBP	11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	PLS1	Q14651	629 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	ASPRV1	Q53RT3	343 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	SYDE2	Q5VT97	1194 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	CASC1	Q6TDU7	716 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	MAMDC4	Q6UXC1	1216 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	MSL3	Q8N5Y2	521 aa	Known RBP	11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	MTMR8	Q96EF0	704 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	MAML3	Q96JK9	1138 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	MAP3K14	Q99558	947 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	UBAC1	Q9BSL1	405 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	MAF1	Q9H063	256 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	KAT14	Q9H8E8	782 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	FBXO40	Q9UH90	709 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	NRBP1	Q9UHY1	535 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	PNMA2	Q9UL42	364 aa		11.4	□□□□□ -0.58
PTPN18-210	ENST00000479295	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.39	□□□□□ -0.59
PTPN18-210	ENST00000479295	BRCA2	P51587	3418 aa		11.39	□□□□□ -0.59
PTPN18-210	ENST00000479295	CYBA	P13498	195 aa		11.39	□□□□□ -0.59
PTPN18-210	ENST00000479295	PRKAR2A	P13861	404 aa	Known RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms