RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 PHF20Q9BVI0 1012 aa15.9■□□□□ 0.14
CCDC78-210ENST00000478979 CRNKL1Q9BZJ0 848 aaKnown RBP15.9■□□□□ 0.14
CCDC78-210ENST00000478979 A0A0U1RQJ8 604 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 USP17L3A6NCW0 530 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 USP17L4A6NCW7 530 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 GOLGA8HP0CJ92 632 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 MCTP2Q6DN12 878 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 USP17L1Q7RTZ2 530 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 STAG2Q8N3U4 1231 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 ATRIPQ8WXE1 791 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 CCDC175P0C221 793 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 CCT6AP40227 531 aaKnown RBP15.89■□□□□ 0.13
CCDC78-210ENST00000478979 FUT2Q10981 343 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 SF3B3Q15393 1217 aaKnown RBP15.89■□□□□ 0.13
CCDC78-210ENST00000478979 SPECC1LQ69YQ0 1117 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 MICALL1Q8N3F8 863 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 STX8Q9UNK0 236 aa15.89■□□□□ 0.13
CCDC78-210ENST00000478979 BCL9LQ86UU0 1499 aa15.88■□□□□ 0.13
CCDC78-210ENST00000478979 LRRIQ3A6PVS8 624 aaPredicted RBP15.88■□□□□ 0.13
CCDC78-210ENST00000478979 TFAP4Q01664 338 aa15.88■□□□□ 0.13
CCDC78-210ENST00000478979 NFIXQ14938 502 aa15.88■□□□□ 0.13
CCDC78-210ENST00000478979 TMTC3Q6ZXV5 915 aa15.88■□□□□ 0.13
CCDC78-210ENST00000478979 ARAP2Q8WZ64 1704 aa15.88■□□□□ 0.13
CCDC78-210ENST00000478979 FAM237AA0A1B0GTK4 181 aa15.88■□□□□ 0.13
CCDC78-210ENST00000478979 SOWAHDA6NJG2 315 aa15.88■□□□□ 0.13
CCDC78-210ENST00000478979 PAGE5Q96GU1 130 aa15.88■□□□□ 0.13
CCDC78-210ENST00000478979 MORC3Q14149 939 aa15.88■□□□□ 0.13
CCDC78-210ENST00000478979 DNAJC21Q5F1R6 531 aaKnown RBP15.88■□□□□ 0.13
CCDC78-210ENST00000478979 BRIP1Q9BX63 1249 aa15.88■□□□□ 0.13
CCDC78-210ENST00000478979 CTNND2Q9UQB3 1225 aa15.88■□□□□ 0.13
CCDC78-210ENST00000478979 PES1O00541 588 aaKnown RBP15.87■□□□□ 0.13
CCDC78-210ENST00000478979 PRPF3O43395 683 aaKnown RBP15.87■□□□□ 0.13
CCDC78-210ENST00000478979 CLEC4GQ6UXB4 293 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 CCDC91Q7Z6B0 441 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 FBXO33Q7Z6M2 555 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 MAPKAPK5Q8IW41 473 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 MKNK2Q9HBH9 465 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 ANAPC4Q9UJX5 808 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 CCNL1Q9UK58 526 aaPredicted RBP15.87■□□□□ 0.13
CCDC78-210ENST00000478979 CNTNAP5Q8WYK1 1306 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 BCORQ6W2J9 1755 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 PP2D1A8MPX8 630 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 MYO1BO43795 1136 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 RNF40O75150 1001 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 KIF4BQ2VIQ3 1234 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 SH3RF3Q8TEJ3 882 aaPredicted RBP15.87■□□□□ 0.13
CCDC78-210ENST00000478979 TGFBRAP1Q8WUH2 860 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 MED4Q9NPJ6 270 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 THRAP3Q9Y2W1 955 aaKnown RBP15.87■□□□□ 0.13
CCDC78-210ENST00000478979 CACNA1SQ13698 1873 aa15.87■□□□□ 0.13
CCDC78-210ENST00000478979 A0A087WUV0 522 aaPredicted RBP15.86■□□□□ 0.13
CCDC78-210ENST00000478979 KIF5CO60282 957 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 ZNF569Q5MCW4 686 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 SWT1Q5T5J6 900 aaKnown RBP15.86■□□□□ 0.13
CCDC78-210ENST00000478979 MLKLQ8NB16 471 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 GBP3Q9H0R5 595 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 KAT14Q9H8E8 782 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 VAT1LQ9HCJ6 419 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 PLCH1Q4KWH8 1693 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 SYNRGQ9UMZ2 1314 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 SCG2P13521 617 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 DPYDQ12882 1025 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 NPY5RQ15761 445 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 TPTE2Q6XPS3 522 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 AFAP1L1Q8TED9 768 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 ACBD3Q9H3P7 528 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 ADGRG1Q9Y653 693 aa15.86■□□□□ 0.13
CCDC78-210ENST00000478979 FAM205AQ6ZU69 1335 aa15.85■□□□□ 0.13
CCDC78-210ENST00000478979 CUL4BQ13620 913 aa15.85■□□□□ 0.13
CCDC78-210ENST00000478979 CT47A1Q5JQC4 288 aaPredicted RBP15.85■□□□□ 0.13
CCDC78-210ENST00000478979 RAD9BQ6WBX8 426 aa15.85■□□□□ 0.13
CCDC78-210ENST00000478979 HEATR3Q7Z4Q2 680 aa15.85■□□□□ 0.13
CCDC78-210ENST00000478979 ARHGEF1Q92888 912 aaKnown RBP15.85■□□□□ 0.13
CCDC78-210ENST00000478979 TIAM2Q8IVF5 1701 aa15.85■□□□□ 0.13
CCDC78-210ENST00000478979 SARSP49591 514 aaKnown RBP15.85■□□□□ 0.13
CCDC78-210ENST00000478979 RRAGBQ5VZM2 374 aa15.85■□□□□ 0.13
CCDC78-210ENST00000478979 RBM28Q9NW13 759 aaKnown RBP15.85■□□□□ 0.13
CCDC78-210ENST00000478979 DACH1Q9UI36 760 aa15.85■□□□□ 0.13
CCDC78-210ENST00000478979 PLCD1P51178 756 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 PNMA1Q8ND90 353 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 KAT2BQ92831 832 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 VPS16Q9H269 839 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 RTCBQ9Y3I0 505 aaKnown RBP15.84■□□□□ 0.13
CCDC78-210ENST00000478979 DUOX1Q9NRD9 1551 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 CTAGE15A4D2H0 777 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 CTAGE8P0CG41 777 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 IL17AQ16552 155 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 CTAGE6Q86UF2 777 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 CTAGE4Q8IX94 777 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 CEP89Q96ST8 783 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 CXorf56Q9H5V9 222 aa15.84■□□□□ 0.13
CCDC78-210ENST00000478979 CTAGE9A4FU28 777 aa15.83■□□□□ 0.13
CCDC78-210ENST00000478979 SYF2O95926 243 aaKnown RBP15.83■□□□□ 0.13
CCDC78-210ENST00000478979 LDHBP07195 334 aaKnown RBP15.83■□□□□ 0.13
CCDC78-210ENST00000478979 LIG3P49916 1009 aa15.83■□□□□ 0.13
CCDC78-210ENST00000478979 TYW1BQ6NUM6 668 aa15.83■□□□□ 0.13
CCDC78-210ENST00000478979 NOA1Q8NC60 698 aaKnown RBP15.83■□□□□ 0.13
CCDC78-210ENST00000478979 ENOX1Q8TC92 643 aaKnown RBP15.83■□□□□ 0.13
CCDC78-210ENST00000478979 IL17RBQ9NRM6 502 aa15.83■□□□□ 0.13
CCDC78-210ENST00000478979 ERLIN2O94905 339 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms