RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 WDR59Q6PJI9 974 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 SLC30A9Q6PML9 568 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 MAATS1Q7Z4T9 603 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 IFT81Q8WYA0 676 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 HAUS7Q99871 368 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 FPGT-TNNI3KV9GXZ4 949 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 TMEM131LA2VDJ0 1609 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 HMGB1P1B2RPK0 211 aaPredicted RBP23.62■■□□□ 1.37
SDF4-206ENST00000478938 UBE2Q2LH0YL09 131 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 SEMA3EO15041 775 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 DIAPH2O60879 1101 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 ARID4AP29374 1257 aaPredicted RBP23.62■■□□□ 1.37
SDF4-206ENST00000478938 VAV2P52735 878 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 TRIM14Q14142 442 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 C8orf74Q6P047 294 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 KBTBD3Q8NAB2 608 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 PCDHGC5Q9Y5F6 944 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 MED1Q15648 1581 aaPredicted RBP23.62■■□□□ 1.37
SDF4-206ENST00000478938 PPP1R3GB7ZBB8 358 aa23.61■■□□□ 1.37
SDF4-206ENST00000478938 FESP07332 822 aa23.61■■□□□ 1.37
SDF4-206ENST00000478938 AGAP11Q8TF27 550 aa23.61■■□□□ 1.37
SDF4-206ENST00000478938 NUP133Q8WUM0 1156 aa23.61■■□□□ 1.37
SDF4-206ENST00000478938 RTN3O95197 1032 aaPredicted RBP23.61■■□□□ 1.37
SDF4-206ENST00000478938 EIF4A1P60842 406 aaKnown RBP23.61■■□□□ 1.37
SDF4-206ENST00000478938 PROSER3Q2NL68 480 aa23.61■■□□□ 1.37
SDF4-206ENST00000478938 FBXO31Q5XUX0 539 aaPredicted RBP23.61■■□□□ 1.37
SDF4-206ENST00000478938 NFRKBQ6P4R8 1299 aa23.61■■□□□ 1.37
SDF4-206ENST00000478938 FNBP4Q8N3X1 1017 aaPredicted RBP23.61■■□□□ 1.37
SDF4-206ENST00000478938 ZNF513Q8N8E2 541 aaPredicted RBP23.61■■□□□ 1.37
SDF4-206ENST00000478938 FAM167BQ9BTA0 163 aa23.61■■□□□ 1.37
SDF4-206ENST00000478938 IGSF1Q8N6C5 1336 aa23.6■■□□□ 1.37
SDF4-206ENST00000478938 AHCYL1O43865 530 aa23.6■■□□□ 1.37
SDF4-206ENST00000478938 CYP27A1Q02318 531 aa23.6■■□□□ 1.37
SDF4-206ENST00000478938 UBXN1Q04323 297 aa23.6■■□□□ 1.37
SDF4-206ENST00000478938 CRELD2Q6UXH1 353 aaPredicted RBP23.6■■□□□ 1.37
SDF4-206ENST00000478938 RPUSD2Q8IZ73 545 aaKnown RBP23.6■■□□□ 1.37
SDF4-206ENST00000478938 L3MBTL3Q96JM7 780 aaPredicted RBP23.6■■□□□ 1.37
SDF4-206ENST00000478938 LIMA1Q9UHB6 759 aaKnown RBP23.6■■□□□ 1.37
SDF4-206ENST00000478938 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.6■■□□□ 1.37
SDF4-206ENST00000478938 MAP3K15Q6ZN16 1313 aa23.6■■□□□ 1.37
SDF4-206ENST00000478938 PPIP5K2O43314 1243 aa23.6■■□□□ 1.37
SDF4-206ENST00000478938 GLI1P08151 1106 aa23.6■■□□□ 1.37
SDF4-206ENST00000478938 KRT83P78385 493 aa23.6■■□□□ 1.37
SDF4-206ENST00000478938 GNPTABQ3T906 1256 aa23.6■■□□□ 1.37
SDF4-206ENST00000478938 FBXL16Q8N461 479 aa23.6■■□□□ 1.37
SDF4-206ENST00000478938 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.6■■□□□ 1.378e-8■■■■□ 22.7
SDF4-206ENST00000478938 ANTXR2P58335 489 aa23.59■■□□□ 1.37
SDF4-206ENST00000478938 TTF1Q15361 905 aaPredicted RBP23.59■■□□□ 1.37
SDF4-206ENST00000478938 CWF19L1Q69YN2 538 aaKnown RBP23.59■■□□□ 1.37
SDF4-206ENST00000478938 CD302Q8IX05 232 aa23.59■■□□□ 1.37
SDF4-206ENST00000478938 RBM12Q9NTZ6 932 aaKnown RBP23.59■■□□□ 1.37
SDF4-206ENST00000478938 PHF20L1A8MW92 1017 aa23.59■■□□□ 1.37
SDF4-206ENST00000478938 NEFHP12036 1026 aa23.59■■□□□ 1.37
SDF4-206ENST00000478938 TNFRSF8P28908 595 aa23.59■■□□□ 1.37
SDF4-206ENST00000478938 SF3A3Q12874 501 aaKnown RBP eCLIP23.59■■□□□ 1.37
SDF4-206ENST00000478938 SLC5A4Q9NY91 659 aa23.59■■□□□ 1.37
SDF4-206ENST00000478938 PLAAQ9Y263 795 aa23.59■■□□□ 1.37
SDF4-206ENST00000478938 MAST3O60307 1309 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 PTPREP23469 700 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 ZNF572Q7Z3I7 529 aaPredicted RBP23.58■■□□□ 1.37
SDF4-206ENST00000478938 TRIM74Q86UV6 250 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 TRIM73Q86UV7 250 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 HELLSQ9NRZ9 838 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 PANK4Q9NVE7 773 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 NOP53Q9NZM5 478 aaKnown RBP23.58■■□□□ 1.37
SDF4-206ENST00000478938 G3BP2Q9UN86 482 aaKnown RBP23.58■■□□□ 1.37
SDF4-206ENST00000478938 CAPN6Q9Y6Q1 641 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 DIP2CQ9Y2E4 1556 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 ABL2P42684 1182 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 PAPOLAP51003 745 aaKnown RBP23.58■■□□□ 1.37
SDF4-206ENST00000478938 BLMHQ13867 455 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 CCDC63Q8NA47 563 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 KDM4CQ9H3R0 1056 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 SLC12A6Q9UHW9 1150 aa23.58■■□□□ 1.37
SDF4-206ENST00000478938 LUC7L2Q9Y383 392 aaKnown RBP23.58■■□□□ 1.37
SDF4-206ENST00000478938 MST1RQ04912 1400 aa23.58■■□□□ 1.36
SDF4-206ENST00000478938 PES1O00541 588 aaKnown RBP23.57■■□□□ 1.36
SDF4-206ENST00000478938 TOB1P50616 345 aaPredicted RBP23.57■■□□□ 1.36
SDF4-206ENST00000478938 ITIH3Q06033 890 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 NFXL1Q6ZNB6 911 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 TBC1D1Q86TI0 1168 aaPredicted RBP23.57■■□□□ 1.36
SDF4-206ENST00000478938 DNAJC7Q99615 494 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 DBF4Q9UBU7 674 aaPredicted RBP23.57■■□□□ 1.36
SDF4-206ENST00000478938 AKAP12Q02952 1782 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 PRR36Q9H6K5 1346 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 MRC1P22897 1456 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 A0A087X0B3 334 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 GNAT1P11488 350 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 LAMB3Q13751 1172 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 TAX1BP1Q86VP1 789 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 KLHL23Q8NBE8 558 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 OSBPL9Q96SU4 736 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 NDST4Q9H3R1 872 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 TMBIM4Q9HC24 238 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 EPB41L5Q9HCM4 733 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 BABAM1Q9NWV8 329 aa23.57■■□□□ 1.36
SDF4-206ENST00000478938 C5orf60A6NFR6 353 aa23.56■■□□□ 1.36
SDF4-206ENST00000478938 GHRP10912 638 aa23.56■■□□□ 1.36
SDF4-206ENST00000478938 GUCY2DQ02846 1103 aa23.56■■□□□ 1.36
SDF4-206ENST00000478938 EPHA10Q5JZY3 1008 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms