RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 SLFN13Q68D06 897 aa27.12■■□□□ 1.93
C9orf3-216ENST00000478603 GMCL1P1Q8NEA9 526 aa27.12■■□□□ 1.93
C9orf3-216ENST00000478603 CHMP4CQ96CF2 233 aa27.12■■□□□ 1.93
C9orf3-216ENST00000478603 FAM227BQ96M60 508 aa27.12■■□□□ 1.93
C9orf3-216ENST00000478603 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.12■■□□□ 1.93
C9orf3-216ENST00000478603 TACC3Q9Y6A5 838 aa27.12■■□□□ 1.93
C9orf3-216ENST00000478603 MYCNP04198 464 aaPredicted RBP27.11■■□□□ 1.93
C9orf3-216ENST00000478603 B4GALNT3Q6L9W6 998 aa27.11■■□□□ 1.93
C9orf3-216ENST00000478603 RAVER2Q9HCJ3 691 aaKnown RBP27.11■■□□□ 1.93
C9orf3-216ENST00000478603 HELLSQ9NRZ9 838 aa27.11■■□□□ 1.93
C9orf3-216ENST00000478603 FEM1BQ9UK73 627 aa27.11■■□□□ 1.93
C9orf3-216ENST00000478603 SYNPO2Q9UMS6 1093 aa27.11■■□□□ 1.93
C9orf3-216ENST00000478603 CTDP1Q9Y5B0 961 aaPredicted RBP27.11■■□□□ 1.93
C9orf3-216ENST00000478603 A0A0D9SFI3 127 aa27.1■■□□□ 1.93
C9orf3-216ENST00000478603 SOX1O00570 391 aaPredicted RBP27.1■■□□□ 1.93
C9orf3-216ENST00000478603 ZBED4O75132 1171 aa27.1■■□□□ 1.93
C9orf3-216ENST00000478603 ARRDC4Q8NCT1 418 aa27.1■■□□□ 1.93
C9orf3-216ENST00000478603 TINF2Q9BSI4 451 aa27.1■■□□□ 1.93
C9orf3-216ENST00000478603 ISY1Q9ULR0 285 aaKnown RBP27.1■■□□□ 1.93
C9orf3-216ENST00000478603 DIS3Q9Y2L1 958 aaKnown RBP27.1■■□□□ 1.93
C9orf3-216ENST00000478603 NMT2O60551 498 aa27.09■■□□□ 1.93
C9orf3-216ENST00000478603 BMP3P12645 472 aa27.09■■□□□ 1.93
C9orf3-216ENST00000478603 TAL1P17542 331 aaPredicted RBP27.09■■□□□ 1.93
C9orf3-216ENST00000478603 BMP8BP34820 402 aa27.09■■□□□ 1.93
C9orf3-216ENST00000478603 SLC38A10Q9HBR0 1119 aa27.09■■□□□ 1.93
C9orf3-216ENST00000478603 DNAH12Q6ZR08 3092 aa27.08■■□□□ 1.93
C9orf3-216ENST00000478603 TSPY2A6NKD2 308 aa27.08■■□□□ 1.93
C9orf3-216ENST00000478603 SMC5Q8IY18 1101 aa27.08■■□□□ 1.93
C9orf3-216ENST00000478603 RWDD1Q9H446 243 aaPredicted RBP27.08■■□□□ 1.93
C9orf3-216ENST00000478603 IL17RBQ9NRM6 502 aa27.08■■□□□ 1.93
C9orf3-216ENST00000478603 TRIM6-TRIM34B2RNG4 842 aa27.07■■□□□ 1.92
C9orf3-216ENST00000478603 TMEM232C9JQI7 657 aa27.07■■□□□ 1.92
C9orf3-216ENST00000478603 KBTBD13C9JR72 458 aa27.07■■□□□ 1.92
C9orf3-216ENST00000478603 ATP2A1O14983 1001 aa27.07■■□□□ 1.92
C9orf3-216ENST00000478603 IGHDP01880 384 aa27.07■■□□□ 1.92
C9orf3-216ENST00000478603 AAMPQ13685 434 aa27.07■■□□□ 1.92
C9orf3-216ENST00000478603 EXOC6Q8TAG9 804 aa27.07■■□□□ 1.92
C9orf3-216ENST00000478603 DDX11Q96FC9 970 aa27.07■■□□□ 1.92
C9orf3-216ENST00000478603 ANAPC4Q9UJX5 808 aa27.07■■□□□ 1.92
C9orf3-216ENST00000478603 STX8Q9UNK0 236 aa27.07■■□□□ 1.92
C9orf3-216ENST00000478603 MCM3APO60318 1980 aa27.07■■□□□ 1.92
C9orf3-216ENST00000478603 RANBP6O60518 1105 aaKnown RBP27.06■■□□□ 1.92
C9orf3-216ENST00000478603 MCCP23508 829 aa27.06■■□□□ 1.92
C9orf3-216ENST00000478603 RTP1P59025 263 aa27.06■■□□□ 1.92
C9orf3-216ENST00000478603 NMIQ13287 307 aaPredicted RBP27.06■■□□□ 1.92
C9orf3-216ENST00000478603 LRRC41Q15345 812 aa27.06■■□□□ 1.92
C9orf3-216ENST00000478603 MCMDC2Q4G0Z9 681 aa27.06■■□□□ 1.92
C9orf3-216ENST00000478603 RILPL2Q969X0 211 aa27.06■■□□□ 1.92
C9orf3-216ENST00000478603 LRCH3Q96II8 777 aa27.06■■□□□ 1.92
C9orf3-216ENST00000478603 NRBP1Q9UHY1 535 aa27.06■■□□□ 1.92
C9orf3-216ENST00000478603 LAMA3Q16787 3333 aa27.05■■□□□ 1.92
C9orf3-216ENST00000478603 ZNF865P0CJ78 1059 aaPredicted RBP27.05■■□□□ 1.92
C9orf3-216ENST00000478603 SLC1A4P43007 532 aa27.05■■□□□ 1.92
C9orf3-216ENST00000478603 MDM2Q00987 491 aaPredicted RBP27.05■■□□□ 1.92
C9orf3-216ENST00000478603 ALX1Q15699 326 aa27.05■■□□□ 1.92
C9orf3-216ENST00000478603 RASGRP2Q7LDG7 609 aa27.05■■□□□ 1.92
C9orf3-216ENST00000478603 ZNF589Q86UQ0 364 aaPredicted RBP27.05■■□□□ 1.92
C9orf3-216ENST00000478603 UBE2OQ9C0C9 1292 aaKnown RBP27.05■■□□□ 1.92
C9orf3-216ENST00000478603 DNAJC25-GNG10A0A024R161 153 aa27.04■■□□□ 1.92
C9orf3-216ENST00000478603 FGAP02671 866 aa27.04■■□□□ 1.92
C9orf3-216ENST00000478603 ADCYAP1R1P41586 468 aa27.04■■□□□ 1.92
C9orf3-216ENST00000478603 FERMT2Q96AC1 680 aa27.04■■□□□ 1.92
C9orf3-216ENST00000478603 LENG1Q96BZ8 264 aaPredicted RBP27.04■■□□□ 1.92
C9orf3-216ENST00000478603 GMCL1Q96IK5 515 aa27.04■■□□□ 1.92
C9orf3-216ENST00000478603 XPNPEP3Q9NQH7 507 aa27.04■■□□□ 1.92
C9orf3-216ENST00000478603 RARBP10826 455 aa27.03■■□□□ 1.92
C9orf3-216ENST00000478603 STAT2P52630 851 aa27.03■■□□□ 1.92
C9orf3-216ENST00000478603 IKQ13123 557 aaPredicted RBP27.03■■□□□ 1.92
C9orf3-216ENST00000478603 SLC39A5Q6ZMH5 540 aa27.03■■□□□ 1.92
C9orf3-216ENST00000478603 KCTD1Q719H9 257 aa27.03■■□□□ 1.92
C9orf3-216ENST00000478603 CHD1LQ86WJ1 897 aa27.03■■□□□ 1.92
C9orf3-216ENST00000478603 TOMM22Q9NS69 142 aa27.03■■□□□ 1.92
C9orf3-216ENST00000478603 HOMER2Q9NSB8 354 aa27.03■■□□□ 1.92
C9orf3-216ENST00000478603 MTMR7Q9Y216 660 aa27.03■■□□□ 1.92
C9orf3-216ENST00000478603 CNPY2Q9Y2B0 182 aa27.03■■□□□ 1.92
C9orf3-216ENST00000478603 ATP11BQ9Y2G3 1177 aa27.03■■□□□ 1.92
C9orf3-216ENST00000478603 ORC4O43929 436 aa27.02■■□□□ 1.92
C9orf3-216ENST00000478603 SNAI1O95863 264 aaPredicted RBP27.02■■□□□ 1.92
C9orf3-216ENST00000478603 PGK1P00558 417 aa27.02■■□□□ 1.92
C9orf3-216ENST00000478603 HSPD1P10809 573 aaKnown RBP27.02■■□□□ 1.92
C9orf3-216ENST00000478603 OAZ1P54368 228 aa27.02■■□□□ 1.92
C9orf3-216ENST00000478603 RRP12Q5JTH9 1297 aaKnown RBP27.02■■□□□ 1.92
C9orf3-216ENST00000478603 PPP4R3BQ5MIZ7 849 aa27.02■■□□□ 1.92
C9orf3-216ENST00000478603 PLEKHM2Q8IWE5 1019 aa27.02■■□□□ 1.92
C9orf3-216ENST00000478603 ANKRD35Q8N283 1001 aa27.02■■□□□ 1.92
C9orf3-216ENST00000478603 STAG1Q8WVM7 1258 aa27.02■■□□□ 1.92
C9orf3-216ENST00000478603 FGRP09769 529 aa27.01■■□□□ 1.91
C9orf3-216ENST00000478603 AKR1A1P14550 325 aa27.01■■□□□ 1.91
C9orf3-216ENST00000478603 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.01■■□□□ 1.91
C9orf3-216ENST00000478603 FAM160B2Q86V87 743 aa27.01■■□□□ 1.91
C9orf3-216ENST00000478603 TDHQ8IZJ6 230 aa27.01■■□□□ 1.91
C9orf3-216ENST00000478603 CHST13Q8NET6 341 aa27.01■■□□□ 1.91
C9orf3-216ENST00000478603 CHURC1Q8WUH1 139 aa27.01■■□□□ 1.91
C9orf3-216ENST00000478603 ZNF536O15090 1300 aa27■■□□□ 1.91
C9orf3-216ENST00000478603 CCDC171Q6TFL3 1326 aa27■■□□□ 1.91
C9orf3-216ENST00000478603 SYNGAP1Q96PV0 1343 aa27■■□□□ 1.91
C9orf3-216ENST00000478603 SNAP25P60880 206 aa27■■□□□ 1.91
C9orf3-216ENST00000478603 HAND2P61296 217 aa27■■□□□ 1.91
C9orf3-216ENST00000478603 NUCB1Q02818 461 aa27■■□□□ 1.91
C9orf3-216ENST00000478603 MAMDC4Q6UXC1 1216 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms