RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 ZNF214Q9UL59 606 aaPredicted RBP12.81□□□□□ -0.36
APTX-222ENST00000478279 SYNGAP1Q96PV0 1343 aa12.81□□□□□ -0.36
APTX-222ENST00000478279 MYH8P13535 1937 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 MYADML2A6NDP7 307 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 ARVCFO00192 962 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 VWA5AO00534 786 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 SNAI1O95863 264 aaPredicted RBP12.8□□□□□ -0.36
APTX-222ENST00000478279 PDE6AP16499 860 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 HOXD11P31277 338 aaPredicted RBP12.8□□□□□ -0.36
APTX-222ENST00000478279 SLC9C2Q5TAH2 1124 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 MAMDC4Q6UXC1 1216 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 REPS2Q8NFH8 660 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 SDR42E1Q8WUS8 393 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 HERVK_113Q902F9 699 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 FRAT1Q92837 279 aaPredicted RBP12.8□□□□□ -0.36
APTX-222ENST00000478279 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 DYNLL2Q96FJ2 89 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 PPP1R12CQ9BZL4 782 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 SLC28A3Q9HAS3 691 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 SPC25Q9HBM1 224 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 IL23AQ9NPF7 189 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 CXXC1Q9P0U4 656 aaPredicted RBP12.8□□□□□ -0.36
APTX-222ENST00000478279 ZHX1Q9UKY1 873 aaPredicted RBP12.8□□□□□ -0.36
APTX-222ENST00000478279 PPP1R9AQ9ULJ8 1098 aa12.8□□□□□ -0.36
APTX-222ENST00000478279 A0A0U1RQG5 324 aaPredicted RBP12.79□□□□□ -0.36
APTX-222ENST00000478279 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
APTX-222ENST00000478279 TLR3O15455 904 aaKnown RBP12.79□□□□□ -0.36
APTX-222ENST00000478279 ASGR1P07306 291 aa12.79□□□□□ -0.36
APTX-222ENST00000478279 C6orf222P0C671 652 aaPredicted RBP12.79□□□□□ -0.36
APTX-222ENST00000478279 BMP1P13497 986 aa12.79□□□□□ -0.36
APTX-222ENST00000478279 IRX5P78411 483 aaPredicted RBP12.79□□□□□ -0.36
APTX-222ENST00000478279 TTF1Q15361 905 aaPredicted RBP12.79□□□□□ -0.36
APTX-222ENST00000478279 FAM126BQ8IXS8 530 aa12.79□□□□□ -0.36
APTX-222ENST00000478279 TMEM57Q8N5G2 664 aa12.79□□□□□ -0.36
APTX-222ENST00000478279 DDX11Q96FC9 970 aa12.79□□□□□ -0.36
APTX-222ENST00000478279 MTIF3Q9H2K0 278 aaKnown RBP12.79□□□□□ -0.36
APTX-222ENST00000478279 NKX2-4Q9H2Z4 354 aa12.79□□□□□ -0.36
APTX-222ENST00000478279 DNAJC25-GNG10A0A024R161 153 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 APBB1O00213 710 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 CD4P01730 458 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 FGBP02675 491 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 EEF2P13639 858 aaKnown RBP12.78□□□□□ -0.36
APTX-222ENST00000478279 CYP2C18P33260 490 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 GJA9P57773 515 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 ACVR2BQ13705 512 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 GNASQ5JWF2 1037 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
APTX-222ENST00000478279 LCORLQ8N3X6 602 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 NECAB3Q96P71 396 aaPredicted RBP12.78□□□□□ -0.36
APTX-222ENST00000478279 TEX13BQ9BXU2 312 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 UPF3AQ9H1J1 476 aaKnown RBP12.78□□□□□ -0.36
APTX-222ENST00000478279 C1orf115Q9H7X2 142 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 KANSL2Q9H9L4 492 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 YBX2Q9Y2T7 364 aaKnown RBP12.78□□□□□ -0.36
APTX-222ENST00000478279 ARIH1Q9Y4X5 557 aaPredicted RBP12.78□□□□□ -0.36
APTX-222ENST00000478279 ZNF532Q9HCE3 1301 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 GBF1Q92538 1859 aa12.78□□□□□ -0.36
APTX-222ENST00000478279 PRRC2BQ5JSZ5 2229 aaKnown RBP12.77□□□□□ -0.36
APTX-222ENST00000478279 TCRBV5S4A2TA0A5A2 114 aa12.77□□□□□ -0.37
APTX-222ENST00000478279 CDK8P49336 464 aa12.77□□□□□ -0.37
APTX-222ENST00000478279 AAK1Q2M2I8 961 aa12.77□□□□□ -0.37
APTX-222ENST00000478279 FAM83BQ5T0W9 1011 aa12.77□□□□□ -0.37
APTX-222ENST00000478279 AACSQ86V21 672 aa12.77□□□□□ -0.37
APTX-222ENST00000478279 ABHD16BQ9H3Z7 469 aa12.77□□□□□ -0.37
APTX-222ENST00000478279 GOPCQ9HD26 462 aa12.77□□□□□ -0.37
APTX-222ENST00000478279 ATP8A2Q9NTI2 1148 aa12.77□□□□□ -0.37
APTX-222ENST00000478279 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.77□□□□□ -0.37
APTX-222ENST00000478279 MCM3APO60318 1980 aa12.76□□□□□ -0.37
APTX-222ENST00000478279 ADCY6O43306 1168 aa12.76□□□□□ -0.37
APTX-222ENST00000478279 CCDC144BQ3MJ40 725 aa12.76□□□□□ -0.37
APTX-222ENST00000478279 C12orf60Q5U649 245 aa12.76□□□□□ -0.37
APTX-222ENST00000478279 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
APTX-222ENST00000478279 ERC1Q8IUD2 1116 aa12.76□□□□□ -0.37
APTX-222ENST00000478279 ARMT1Q9H993 441 aa12.76□□□□□ -0.37
APTX-222ENST00000478279 RIPK3Q9Y572 518 aa12.76□□□□□ -0.37
APTX-222ENST00000478279 BAZ2AQ9UIF9 1905 aaKnown RBP12.76□□□□□ -0.37
APTX-222ENST00000478279 SMIM22K7EJ46 135 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 CTAGE5O15320 804 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 PRKAB2O43741 272 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 RAD21O60216 631 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 NKX3-2P78367 333 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 TFF2Q03403 129 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 PPP2R2DQ66LE6 453 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 C16orf86Q6ZW13 317 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 OTOP2Q7RTS6 562 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 AMOTL1Q8IY63 956 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 SLC43A3Q8NBI5 491 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 SLF1Q9BQI6 1058 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 HIPK3Q9H422 1215 aa12.75□□□□□ -0.37
APTX-222ENST00000478279 MUC6Q6W4X9 2439 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 CYP2D7A0A087X1C5 515 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 USP17L12C9JPN9 530 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 USP17L21D6R901 530 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 GOLIM4O00461 696 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 ATP2A1O14983 1001 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 ERC2O15083 957 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 RABGGTBP53611 331 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms