RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 KANSL2Q9H9L4 492 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 TOMM22Q9NS69 142 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 FBXO28Q9NVF7 368 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 GJD2Q9UKL4 321 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 MTMR7Q9Y216 660 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 GOLGA8CPA6NN73 597 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 WDR46O15213 610 aaKnown RBP9.85□□□□□ -0.83
ERCC8-205ENST00000477893 FOXP2O15409 715 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 SLC3A2P08195 630 aaKnown RBP9.85□□□□□ -0.83
ERCC8-205ENST00000477893 TSPY3P0CV98 308 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 TSPY8P0CW00 308 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 RGS2P41220 211 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 SLC4A3P48751 1232 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 HAND2P61296 217 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 PDE4BQ07343 736 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 RRP12Q5JTH9 1297 aaKnown RBP9.85□□□□□ -0.83
ERCC8-205ENST00000477893 Q6ZNB5 142 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 NCAPG2Q86XI2 1143 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 PXYLP1Q8TE99 480 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 U2AF1L4Q8WU68 220 aaKnown RBP9.85□□□□□ -0.83
ERCC8-205ENST00000477893 LPAR1Q92633 364 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 CEP95Q96GE4 821 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.85□□□□□ -0.83
ERCC8-205ENST00000477893 ZNF287Q9HBT7 754 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 HELLSQ9NRZ9 838 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 CLIP2Q9UDT6 1046 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 IVNS1ABPQ9Y6Y0 642 aa9.85□□□□□ -0.83
ERCC8-205ENST00000477893 MKI67P46013 3256 aaKnown RBP9.85□□□□□ -0.83
ERCC8-205ENST00000477893 PLXNB2O15031 1838 aa9.84□□□□□ -0.83
ERCC8-205ENST00000477893 PDE4DIPQ5VU43 2346 aa9.84□□□□□ -0.83
ERCC8-205ENST00000477893 RANBP6O60518 1105 aaKnown RBP9.84□□□□□ -0.83
ERCC8-205ENST00000477893 NDUFB10O96000 172 aa9.84□□□□□ -0.83
ERCC8-205ENST00000477893 TFRCP02786 760 aaKnown RBP9.84□□□□□ -0.83
ERCC8-205ENST00000477893 GJB1P08034 283 aa9.84□□□□□ -0.83
ERCC8-205ENST00000477893 GJA8P48165 433 aa9.84□□□□□ -0.83
ERCC8-205ENST00000477893 TFAP4Q01664 338 aa9.84□□□□□ -0.83
ERCC8-205ENST00000477893 MCMDC2Q4G0Z9 681 aa9.84□□□□□ -0.83
ERCC8-205ENST00000477893 CWC27Q6UX04 472 aaKnown RBP9.84□□□□□ -0.83
ERCC8-205ENST00000477893 APBA2Q99767 749 aa9.84□□□□□ -0.83
ERCC8-205ENST00000477893 MOV10L1Q9BXT6 1211 aaKnown RBP9.84□□□□□ -0.83
ERCC8-205ENST00000477893 SPATC1LQ9H0A9 340 aa9.84□□□□□ -0.83
ERCC8-205ENST00000477893 DIAPH3Q9NSV4 1193 aa9.84□□□□□ -0.83
ERCC8-205ENST00000477893 HOXC10Q9NYD6 342 aa9.84□□□□□ -0.83
ERCC8-205ENST00000477893 CCDC171Q6TFL3 1326 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 A0A0G2JMZ2 1700 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 TSPY2A6NKD2 308 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 F5H6K3 240 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 NMT2O60551 498 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 FARP2O94887 1054 aaPredicted RBP9.83□□□□□ -0.84
ERCC8-205ENST00000477893 ERCC3P19447 782 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 SDSP20132 328 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 PDE4AP27815 886 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 FOXK1P85037 733 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 KLRC3Q07444 240 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 MAP2K5Q13163 448 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 TMEM132BQ14DG7 1078 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 MORN1Q5T089 497 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 PRPF38BQ5VTL8 546 aaKnown RBP9.83□□□□□ -0.84
ERCC8-205ENST00000477893 LBX2Q6XYB7 198 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 RASGRP2Q7LDG7 609 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 NKX2-3Q8TAU0 364 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 WNT2BQ93097 391 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 KIFC2Q96AC6 838 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 SLF1Q9BQI6 1058 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 STX8Q9UNK0 236 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 TACC3Q9Y6A5 838 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 GREB1LQ9C091 1923 aaPredicted RBP9.83□□□□□ -0.84
ERCC8-205ENST00000477893 DOCK3Q8IZD9 2030 aa9.83□□□□□ -0.84
ERCC8-205ENST00000477893 IGKV6D-41A0A0C4DH26 115 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 SLC15A5A6NIM6 579 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 SGPL1O95470 568 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 TTLL1O95922 423 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 HSPD1P10809 573 aaKnown RBP9.82□□□□□ -0.84
ERCC8-205ENST00000477893 PTPREP23469 700 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 ADORA2AP29274 412 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 CNGA1P29973 690 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 CCND3P30281 292 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-205ENST00000477893 CACNB2Q08289 660 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-205ENST00000477893 IKQ13123 557 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-205ENST00000477893 GRB14Q14449 540 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 SLFN13Q68D06 897 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 DPP9Q86TI2 863 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 NEDD1Q8NHV4 660 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 NPLOC4Q8TAT6 608 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 DIS3LQ8TF46 1054 aaKnown RBP9.82□□□□□ -0.84
ERCC8-205ENST00000477893 USP6NLQ92738 828 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 DPF3Q92784 378 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 HMX1Q9NP08 348 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-205ENST00000477893 PAK6Q9NQU5 681 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-205ENST00000477893 MTMR4Q9NYA4 1195 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 FLRT1Q9NZU1 646 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 NYAP2Q9P242 653 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 PPP1R9AQ9ULJ8 1098 aa9.82□□□□□ -0.84
ERCC8-205ENST00000477893 CTDP1Q9Y5B0 961 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-205ENST00000477893 PLIN4Q96Q06 1357 aa9.81□□□□□ -0.84
ERCC8-205ENST00000477893 BHMG1C9JSJ3 638 aaPredicted RBP9.81□□□□□ -0.84
ERCC8-205ENST00000477893 VWA5AO00534 786 aa9.81□□□□□ -0.84
ERCC8-205ENST00000477893 FGAP02671 866 aa9.81□□□□□ -0.84
ERCC8-205ENST00000477893 PGK2P07205 417 aa9.81□□□□□ -0.84
ERCC8-205ENST00000477893 CYP2C19P33261 490 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms