RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 UHRF1Q96T88 793 aaPredicted RBP24.46■■□□□ 1.51
PDLIM1-202ENST00000477757 REV3LO60673 3130 aa24.45■■□□□ 1.5
PDLIM1-202ENST00000477757 MYADML2A6NDP7 307 aa24.45■■□□□ 1.5
PDLIM1-202ENST00000477757 DUSP11O75319 330 aaKnown RBP24.45■■□□□ 1.5
PDLIM1-202ENST00000477757 CSF2RAP15509 400 aa24.45■■□□□ 1.5
PDLIM1-202ENST00000477757 TMEM199Q8N511 208 aa24.45■■□□□ 1.5
PDLIM1-202ENST00000477757 XIRP2A4UGR9 3374 aa24.44■■□□□ 1.5
PDLIM1-202ENST00000477757 SNAI1O95863 264 aaPredicted RBP24.44■■□□□ 1.5
PDLIM1-202ENST00000477757 EEF2P13639 858 aaKnown RBP24.44■■□□□ 1.5
PDLIM1-202ENST00000477757 RAB30Q15771 203 aa24.44■■□□□ 1.5
PDLIM1-202ENST00000477757 MAMDC4Q6UXC1 1216 aa24.44■■□□□ 1.5
PDLIM1-202ENST00000477757 ERC1Q8IUD2 1116 aa24.44■■□□□ 1.5
PDLIM1-202ENST00000477757 ZHX1Q9UKY1 873 aaPredicted RBP24.44■■□□□ 1.5
PDLIM1-202ENST00000477757 ZNF365Q70YC5 407 aa24.43■■□□□ 1.5
PDLIM1-202ENST00000477757 PCSK9Q8NBP7 692 aaKnown RBP24.43■■□□□ 1.5
PDLIM1-202ENST00000477757 TEX13BQ9BXU2 312 aa24.43■■□□□ 1.5
PDLIM1-202ENST00000477757 ARMT1Q9H993 441 aa24.43■■□□□ 1.5
PDLIM1-202ENST00000477757 KANSL2Q9H9L4 492 aa24.43■■□□□ 1.5
PDLIM1-202ENST00000477757 GOPCQ9HD26 462 aa24.43■■□□□ 1.5
PDLIM1-202ENST00000477757 ATP8A2Q9NTI2 1148 aa24.43■■□□□ 1.5
PDLIM1-202ENST00000477757 BAZ2AQ9UIF9 1905 aaKnown RBP24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 DNAJC25-GNG10A0A024R161 153 aa24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 A0A0U1RQG5 324 aaPredicted RBP24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 ASGR1P07306 291 aa24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 C6orf222P0C671 652 aaPredicted RBP24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 CDK8P49336 464 aa24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 FAM83BQ5T0W9 1011 aa24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 ZNF467Q7Z7K2 595 aaPredicted RBP24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 FAM126BQ8IXS8 530 aa24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 UPF3AQ9H1J1 476 aaKnown RBP24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 MSRAQ9UJ68 235 aa24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 EXOC6BQ9Y2D4 811 aa24.42■■□□□ 1.5
PDLIM1-202ENST00000477757 TRANK1O15050 2925 aa24.41■■□□□ 1.5
PDLIM1-202ENST00000477757 ARVCFO00192 962 aa24.41■■□□□ 1.5
PDLIM1-202ENST00000477757 ADCY6O43306 1168 aa24.41■■□□□ 1.5
PDLIM1-202ENST00000477757 ACRP10323 421 aa24.41■■□□□ 1.5
PDLIM1-202ENST00000477757 C12orf60Q5U649 245 aa24.41■■□□□ 1.5
PDLIM1-202ENST00000477757 C16orf86Q6ZW13 317 aa24.41■■□□□ 1.5
PDLIM1-202ENST00000477757 IL27Q8NEV9 243 aa24.41■■□□□ 1.5
PDLIM1-202ENST00000477757 GREB1LQ9C091 1923 aaPredicted RBP24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 SMIM22K7EJ46 135 aa24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 GOLIM4O00461 696 aa24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 PRKAB2O43741 272 aa24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 IRX5P78411 483 aaPredicted RBP24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 CCDC85BQ15834 202 aaPredicted RBP24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 SNRNP48Q6IEG0 339 aaKnown RBP24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 CEP85Q6P2H3 762 aa24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 HERVK_113Q902F9 699 aa24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 FAM122AQ96E09 287 aa24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 PPP1R12CQ9BZL4 782 aa24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 SPC25Q9HBM1 224 aa24.4■■□□□ 1.5
PDLIM1-202ENST00000477757 MYO9BQ13459 2157 aa24.39■■□□□ 1.5
PDLIM1-202ENST00000477757 CYP2D7A0A087X1C5 515 aa24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 MBD4O95243 580 aa24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 IGFBP4P22692 258 aa24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 GJA9P57773 515 aa24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 ACVR2BQ13705 512 aa24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 ITPRIPQ8IWB1 547 aa24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 DDX11Q96FC9 970 aa24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 DNAJC2Q99543 621 aaKnown RBP24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 SLF1Q9BQI6 1058 aa24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 MTIF3Q9H2K0 278 aaKnown RBP24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 IL1RAPL2Q9NP60 686 aa24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 IL23AQ9NPF7 189 aa24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.39■■□□□ 1.49
PDLIM1-202ENST00000477757 GBF1Q92538 1859 aa24.38■■□□□ 1.49
PDLIM1-202ENST00000477757 APBB1O00213 710 aa24.38■■□□□ 1.49
PDLIM1-202ENST00000477757 TLR3O15455 904 aaKnown RBP24.38■■□□□ 1.49
PDLIM1-202ENST00000477757 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.38■■□□□ 1.49
PDLIM1-202ENST00000477757 AMOTL1Q8IY63 956 aa24.38■■□□□ 1.49
PDLIM1-202ENST00000477757 FTSJ3Q8IY81 847 aaKnown RBP24.38■■□□□ 1.49
PDLIM1-202ENST00000477757 NKX2-4Q9H2Z4 354 aa24.38■■□□□ 1.49
PDLIM1-202ENST00000477757 CXXC1Q9P0U4 656 aaPredicted RBP24.38■■□□□ 1.49
PDLIM1-202ENST00000477757 RIPK3Q9Y572 518 aa24.38■■□□□ 1.49
PDLIM1-202ENST00000477757 RAD21O60216 631 aa24.37■■□□□ 1.49
PDLIM1-202ENST00000477757 CD4P01730 458 aa24.37■■□□□ 1.49
PDLIM1-202ENST00000477757 CCDC144BQ3MJ40 725 aa24.37■■□□□ 1.49
PDLIM1-202ENST00000477757 VTI1AQ96AJ9 217 aa24.37■■□□□ 1.49
PDLIM1-202ENST00000477757 ABHD16BQ9H3Z7 469 aa24.37■■□□□ 1.49
PDLIM1-202ENST00000477757 SLC28A3Q9HAS3 691 aa24.37■■□□□ 1.49
PDLIM1-202ENST00000477757 YBX2Q9Y2T7 364 aaKnown RBP24.37■■□□□ 1.49
PDLIM1-202ENST00000477757 USP17L12C9JPN9 530 aa24.36■■□□□ 1.49
PDLIM1-202ENST00000477757 USP17L21D6R901 530 aa24.36■■□□□ 1.49
PDLIM1-202ENST00000477757 ATP2A1O14983 1001 aa24.36■■□□□ 1.49
PDLIM1-202ENST00000477757 CYP2C18P33260 490 aa24.36■■□□□ 1.49
PDLIM1-202ENST00000477757 GNASQ5JWF2 1037 aa24.36■■□□□ 1.49
PDLIM1-202ENST00000477757 FGD4Q96M96 766 aa24.36■■□□□ 1.49
PDLIM1-202ENST00000477757 NUP88Q99567 741 aaPredicted RBP24.36■■□□□ 1.49
PDLIM1-202ENST00000477757 ZBED9Q6R2W3 1325 aa24.35■■□□□ 1.49
PDLIM1-202ENST00000477757 MCM3APO60318 1980 aa24.35■■□□□ 1.49
PDLIM1-202ENST00000477757 CTAGE5O15320 804 aa24.35■■□□□ 1.49
PDLIM1-202ENST00000477757 ADD2P35612 726 aa24.35■■□□□ 1.49
PDLIM1-202ENST00000477757 NKX3-2P78367 333 aa24.35■■□□□ 1.49
PDLIM1-202ENST00000477757 HSP90AB4PQ58FF6 505 aa24.35■■□□□ 1.49
PDLIM1-202ENST00000477757 RHPN1Q8TCX5 695 aa24.35■■□□□ 1.49
PDLIM1-202ENST00000477757 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.35■■□□□ 1.49
PDLIM1-202ENST00000477757 RLBP1P12271 317 aa24.34■■□□□ 1.49
PDLIM1-202ENST00000477757 DDRGK1Q96HY6 314 aa24.34■■□□□ 1.49
PDLIM1-202ENST00000477757 C1QTNF1Q9BXJ1 281 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms