RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 APBA2Q99767 749 aa15.8■□□□□ 0.12
ACTN4-205ENST00000477174 TEX13BQ9BXU2 312 aa15.8■□□□□ 0.12
ACTN4-205ENST00000477174 CTDP1Q9Y5B0 961 aaPredicted RBP15.8■□□□□ 0.12
ACTN4-205ENST00000477174 DOCK3Q8IZD9 2030 aa15.8■□□□□ 0.12
ACTN4-205ENST00000477174 POTEFA5A3E0 1075 aa15.79■□□□□ 0.12
ACTN4-205ENST00000477174 MYCP01106 439 aaPredicted RBP15.79■□□□□ 0.12
ACTN4-205ENST00000477174 GJB1P08034 283 aa15.79■□□□□ 0.12
ACTN4-205ENST00000477174 FCER1AP12319 257 aa15.79■□□□□ 0.12
ACTN4-205ENST00000477174 CCL5P13501 91 aa15.79■□□□□ 0.12
ACTN4-205ENST00000477174 CAPN2P17655 700 aa15.79■□□□□ 0.12
ACTN4-205ENST00000477174 LSG1Q9H089 658 aaKnown RBP15.79■□□□□ 0.12
ACTN4-205ENST00000477174 RNF208Q9H0X6 261 aa15.79■□□□□ 0.12
ACTN4-205ENST00000477174 SLC5A4Q9NY91 659 aa15.79■□□□□ 0.12
ACTN4-205ENST00000477174 ISY1Q9ULR0 285 aaKnown RBP15.79■□□□□ 0.12
ACTN4-205ENST00000477174 MGAMO43451 1857 aa15.79■□□□□ 0.12
ACTN4-205ENST00000477174 CDC45O75419 566 aa15.78■□□□□ 0.12
ACTN4-205ENST00000477174 ADORA2AP29274 412 aa15.78■□□□□ 0.12
ACTN4-205ENST00000477174 IKQ13123 557 aaPredicted RBP15.78■□□□□ 0.12
ACTN4-205ENST00000477174 BTNL9Q6UXG8 535 aa15.78■□□□□ 0.12
ACTN4-205ENST00000477174 KCTD1Q719H9 257 aa15.78■□□□□ 0.12
ACTN4-205ENST00000477174 DPP9Q86TI2 863 aa15.78■□□□□ 0.12
ACTN4-205ENST00000477174 TRIB2Q92519 343 aa15.78■□□□□ 0.12
ACTN4-205ENST00000477174 ZKSCAN3Q9BRR0 538 aa15.78■□□□□ 0.12
ACTN4-205ENST00000477174 UBAC1Q9BSL1 405 aa15.78■□□□□ 0.12
ACTN4-205ENST00000477174 RBM8AQ9Y5S9 174 aaKnown RBP15.78■□□□□ 0.12
ACTN4-205ENST00000477174 RLFQ13129 1914 aa15.78■□□□□ 0.12
ACTN4-205ENST00000477174 E7EWF7 191 aa15.77■□□□□ 0.12
ACTN4-205ENST00000477174 SNHG28P0DPA3 235 aa15.77■□□□□ 0.12
ACTN4-205ENST00000477174 PDHBP11177 359 aa15.77■□□□□ 0.12
ACTN4-205ENST00000477174 ZKSCAN1P17029 563 aaPredicted RBP15.77■□□□□ 0.12
ACTN4-205ENST00000477174 EN2P19622 333 aaPredicted RBP15.77■□□□□ 0.12
ACTN4-205ENST00000477174 KCTD2Q14681 263 aa15.77■□□□□ 0.12
ACTN4-205ENST00000477174 CPXCR1Q8N123 301 aa15.77■□□□□ 0.12
ACTN4-205ENST00000477174 ENAHQ8N8S7 591 aaPredicted RBP15.77■□□□□ 0.12
ACTN4-205ENST00000477174 NCOA7Q8NI08 942 aa15.77■□□□□ 0.12
ACTN4-205ENST00000477174 UNC93B1Q9H1C4 597 aa15.77■□□□□ 0.12
ACTN4-205ENST00000477174 KAT14Q9H8E8 782 aa15.77■□□□□ 0.12
ACTN4-205ENST00000477174 HMX1Q9NP08 348 aaPredicted RBP15.77■□□□□ 0.12
ACTN4-205ENST00000477174 MTMR7Q9Y216 660 aa15.77■□□□□ 0.12
ACTN4-205ENST00000477174 RPTORQ8N122 1335 aa15.76■□□□□ 0.11
ACTN4-205ENST00000477174 GJA8P48165 433 aa15.76■□□□□ 0.11
ACTN4-205ENST00000477174 CCDC96Q2M329 555 aa15.76■□□□□ 0.11
ACTN4-205ENST00000477174 GPATCH4Q5T3I0 446 aaKnown RBP15.76■□□□□ 0.11
ACTN4-205ENST00000477174 MAP3K21Q5TCX8 1036 aa15.76■□□□□ 0.11
ACTN4-205ENST00000477174 MFSD14CQ5VZR4 134 aa15.76■□□□□ 0.11
ACTN4-205ENST00000477174 SNRNP48Q6IEG0 339 aaKnown RBP15.76■□□□□ 0.11
ACTN4-205ENST00000477174 RALYLQ86SE5 291 aaKnown RBP15.76■□□□□ 0.11
ACTN4-205ENST00000477174 PNMA1Q8ND90 353 aa15.76■□□□□ 0.11
ACTN4-205ENST00000477174 CHMP4CQ96CF2 233 aa15.76■□□□□ 0.11
ACTN4-205ENST00000477174 MMP19Q99542 508 aa15.76■□□□□ 0.11
ACTN4-205ENST00000477174 RAVER2Q9HCJ3 691 aaKnown RBP15.76■□□□□ 0.11
ACTN4-205ENST00000477174 ANO2Q9NQ90 1003 aa15.76■□□□□ 0.11
ACTN4-205ENST00000477174 PAK6Q9NQU5 681 aaPredicted RBP15.76■□□□□ 0.11
ACTN4-205ENST00000477174 FBXO40Q9UH90 709 aa15.76■□□□□ 0.11
ACTN4-205ENST00000477174 PRR12Q9ULL5 1215 aa15.76■□□□□ 0.11
ACTN4-205ENST00000477174 TNKSO95271 1327 aa15.75■□□□□ 0.11
ACTN4-205ENST00000477174 COBLO75128 1261 aa15.75■□□□□ 0.11
ACTN4-205ENST00000477174 SGPL1O95470 568 aa15.75■□□□□ 0.11
ACTN4-205ENST00000477174 ZNF543Q08ER8 600 aa15.75■□□□□ 0.11
ACTN4-205ENST00000477174 NECTIN1Q15223 517 aa15.75■□□□□ 0.11
ACTN4-205ENST00000477174 CCL14Q16627 93 aa15.75■□□□□ 0.11
ACTN4-205ENST00000477174 OLFML2BQ68BL8 750 aa15.75■□□□□ 0.11
ACTN4-205ENST00000477174 CHST13Q8NET6 341 aa15.75■□□□□ 0.11
ACTN4-205ENST00000477174 DIS3Q9Y2L1 958 aaKnown RBP15.75■□□□□ 0.11
ACTN4-205ENST00000477174 RIPK3Q9Y572 518 aa15.75■□□□□ 0.11
ACTN4-205ENST00000477174 MYH4Q9Y623 1939 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 BRCA2P51587 3418 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 IGHA2P01877 340 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 PRKAR2AP13861 404 aaKnown RBP15.74■□□□□ 0.11
ACTN4-205ENST00000477174 CACNB2Q08289 660 aaPredicted RBP15.74■□□□□ 0.11
ACTN4-205ENST00000477174 TRIM32Q13049 653 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 SART3Q15020 963 aaKnown RBP15.74■□□□□ 0.11
ACTN4-205ENST00000477174 SEC23AQ15436 765 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 TKFCQ3LXA3 575 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 IFIT1BQ5T764 474 aaKnown RBP15.74■□□□□ 0.11
ACTN4-205ENST00000477174 SYDE2Q5VT97 1194 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 TTBK2Q6IQ55 1244 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 CYB5R4Q7L1T6 521 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.74■□□□□ 0.11
ACTN4-205ENST00000477174 NPLOC4Q8TAT6 608 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 U2AF1L4Q8WU68 220 aaKnown RBP15.74■□□□□ 0.11
ACTN4-205ENST00000477174 GPCPD1Q9NPB8 672 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 PNMA2Q9UL42 364 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 TAF6LQ9Y6J9 622 aa15.74■□□□□ 0.11
ACTN4-205ENST00000477174 ZNF536O15090 1300 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 FRMPD2Q68DX3 1309 aaPredicted RBP15.73■□□□□ 0.11
ACTN4-205ENST00000477174 ERICH2A1L162 156 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 IFIT3O14879 490 aaKnown RBP15.73■□□□□ 0.11
ACTN4-205ENST00000477174 SLC27A2O14975 620 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 SLC16A2P36021 539 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 RNF20Q5VTR2 975 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 CREB3L3Q68CJ9 461 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 STOX1Q6ZVD7 989 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 DDX11Q96FC9 970 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 DEFB118Q96PH6 123 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 MTA3Q9BTC8 594 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.73■□□□□ 0.11
ACTN4-205ENST00000477174 FLRT1Q9NZU1 646 aa15.73■□□□□ 0.11
ACTN4-205ENST00000477174 A0A0G2JMZ2 1700 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms