RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 GADD45BO75293 160 aaPredicted RBP11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 ADCY5O95622 1261 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 CCL5P13501 91 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 RASA1P20936 1047 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 GJB2P29033 226 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 GTF2F1P35269 517 aaKnown RBP eCLIP11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 USP14P54578 494 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 ERVK-9P63128 1117 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 ERVK-24P63145 666 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 USP17L24Q0WX57 530 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 DNTTIP2Q5QJE6 756 aaKnown RBP11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 CWC27Q6UX04 472 aaKnown RBP11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 CCDC129Q6ZRS4 1044 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 STK11IPQ8N1F8 1099 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 SLAIN1Q8ND83 568 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 GPRC5AQ8NFJ5 357 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 COA7Q96BR5 231 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 JAKMIP1Q96N16 626 aaKnown RBP11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 PAGR1Q9BTK6 254 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 FSD1Q9BTV5 496 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 TMEM106CQ9BVX2 250 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 UNC93B1Q9H1C4 597 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 DDX19AQ9NUU7 478 aaKnown RBP11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 BTBD7Q9P203 1132 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 ARPP21Q9UBL0 812 aaPredicted RBP11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 TAOK2Q9UL54 1235 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 MTMR6Q9Y217 621 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 CNPY2Q9Y2B0 182 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 KIF3AQ9Y496 699 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 ROBO3Q96MS0 1386 aa11.15□□□□□ -0.63
SEMA3C-208ENST00000475955 SPDYE16A6NNV3 312 aaPredicted RBP11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 MINDY4BA8MYZ0 360 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 PATL2C9JE40 543 aaKnown RBP11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 INHAP05111 366 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 TRIM32Q13049 653 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 NOLC1Q14978 699 aaKnown RBP eCLIP11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 NECTIN1Q15223 517 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 TSGA10IPQ3SY00 556 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 GIMAP6Q6P9H5 292 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 LBX2Q6XYB7 198 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 IFNL3Q8IZI9 196 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 PXYLP1Q8TE99 480 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 USP6NLQ92738 828 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 MAP4K1Q92918 833 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 CCDC17Q96LX7 622 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 TMX2Q9Y320 296 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 TACC3Q9Y6A5 838 aa11.14□□□□□ -0.63
SEMA3C-208ENST00000475955 SMCHD1A6NHR9 2005 aa11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 PLXNA1Q9UIW2 1896 aa11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 GOLGA6L4A6NEF3 574 aa11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 EEF2P13639 858 aaKnown RBP11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 ICA1Q05084 483 aa11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 BLOC1S2Q6QNY1 142 aa11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 SPICE1Q8N0Z3 855 aa11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 TRIB2Q92519 343 aa11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 FUCA2Q9BTY2 467 aa11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 RNF208Q9H0X6 261 aa11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 BIN2Q9UBW5 565 aaPredicted RBP11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
SEMA3C-208ENST00000475955 IGKV6D-41A0A0C4DH26 115 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 FIBPO43427 364 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 PRDM1O75626 825 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 GJB1P08034 283 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 GNAT2P19087 354 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 CYP2B6P20813 491 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 GJA8P48165 433 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 MORN1Q5T089 497 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 LARP1BQ659C4 914 aaKnown RBP11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 CREB3L3Q68CJ9 461 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 ATL3Q6DD88 541 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 GPR142Q7Z601 462 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 UBE2Q1Q7Z7E8 422 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 CCDC83Q8IWF9 413 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 AMOTL1Q8IY63 956 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 FAM200AQ8TCP9 573 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 FAM227BQ96M60 508 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 NUP62CLQ9H1M0 184 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 VCPKMTQ9H867 229 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 INCENPQ9NQS7 918 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 RBM8AQ9Y5S9 174 aaKnown RBP11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 ZNF236Q9UL36 1845 aa11.12□□□□□ -0.63
SEMA3C-208ENST00000475955 A0A0D9SFI3 127 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 APPP05067 770 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 MAPK4P31152 587 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 TDO2P48775 406 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 UBXN2AP68543 259 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 DHX8Q14562 1220 aaKnown RBP11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 COG2Q14746 738 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 CCL14Q16627 93 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 PLEKHH3Q7Z736 793 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 GTF3C2Q8WUA4 911 aaPredicted RBP11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 TANGO6Q9C0B7 1094 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 ZSCAN16Q9H4T2 348 aaPredicted RBP11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 KANSL2Q9H9L4 492 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 GDPD2Q9HCC8 539 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 ARHGEF10LQ9HCE6 1279 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 PAK6Q9NQU5 681 aaPredicted RBP11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 FBXO28Q9NVF7 368 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms