RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 UBE2OQ9C0C9 1292 aaKnown RBP8.38□□□□□ -1.07
HDAC3-207ENST00000475549 SLC5A4Q9NY91 659 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 DIS3Q9Y2L1 958 aaKnown RBP8.38□□□□□ -1.07
HDAC3-207ENST00000475549 ZNF536O15090 1300 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 NAV1Q8NEY1 1877 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 TRIM43BA6NCK2 446 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 ERC2O15083 957 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 ADCY6O43306 1168 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 TTLL1O95922 423 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 PGK1P00558 417 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 FGRP09769 529 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 ITGB8P26012 769 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 ADCYAP1R1P41586 468 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 PDE1AP54750 535 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 RTP1P59025 263 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 IRX5P78411 483 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-207ENST00000475549 CTDSPL2Q05D32 466 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 HDAC1Q13547 482 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-207ENST00000475549 KCTD2Q14681 263 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 SNX17Q15036 470 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 MAMDC4Q6UXC1 1216 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 Q7L0L9 218 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 RASGRP2Q7LDG7 609 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 SH3RF1Q7Z6J0 888 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 CPXCR1Q8N123 301 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 ARRDC4Q8NCT1 418 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 FERMT2Q96AC1 680 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 KIFC2Q96AC6 838 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 TRIM43Q96BQ3 446 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-207ENST00000475549 CHMP4CQ96CF2 233 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 TEX13BQ9BXU2 312 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 SLC38A10Q9HBR0 1119 aa8.37□□□□□ -1.07
HDAC3-207ENST00000475549 RAVER2Q9HCJ3 691 aaKnown RBP8.37□□□□□ -1.07
HDAC3-207ENST00000475549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDAC3-207ENST00000475549 TSPY3P0CV98 308 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 TSPY8P0CW00 308 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 MCCP23508 829 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 NOVP48745 357 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 SLC4A3P48751 1232 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 TRIM60Q495X7 471 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 SLFN13Q68D06 897 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 CCSAPQ6IQ19 270 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-207ENST00000475549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.36□□□□□ -1.07
HDAC3-207ENST00000475549 FAM227BQ96M60 508 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 NACAP1Q9BZK3 213 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 NAPBQ9H115 298 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 XPNPEP3Q9NQH7 507 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 NRBP1Q9UHY1 535 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 SYNPO2Q9UMS6 1093 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 PHF24Q9UPV7 400 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 DDX49Q9Y6V7 483 aaKnown RBP8.36□□□□□ -1.07
HDAC3-207ENST00000475549 A0A0G2JMZ2 1700 aa8.36□□□□□ -1.07
HDAC3-207ENST00000475549 PLIN4Q96Q06 1357 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 ALPK3Q96L96 1907 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 A0A0D9SFI3 127 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 MYADML2A6NDP7 307 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 TMEM232C9JQI7 657 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 POTEB2H3BUK9 544 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 ZBED4O75132 1171 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 ADAMTS4O75173 837 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 IGHDP01880 384 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 FGAP02671 866 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 RARBP10826 455 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 BMP3P12645 472 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 SNAP25P60880 206 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 CNTN2Q02246 1040 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 TLE2Q04725 743 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 PDE4BQ07343 736 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 LRRFIP1Q32MZ4 808 aaKnown RBP8.35□□□□□ -1.07
HDAC3-207ENST00000475549 C1orf53Q5VUE5 145 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 GPR153Q6NV75 609 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 KCTD1Q719H9 257 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 DEFB123Q8N688 67 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 KLHDC9Q8NEP7 349 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 EVI5LQ96CN4 794 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 GMCL1Q96IK5 515 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 AGBL1Q96MI9 1066 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 KATNBL1Q9H079 304 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 ZNF287Q9HBT7 754 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 ANAPC4Q9UJX5 808 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 FEM1BQ9UK73 627 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 ATP11BQ9Y2G3 1177 aa8.35□□□□□ -1.07
HDAC3-207ENST00000475549 BAZ2AQ9UIF9 1905 aaKnown RBP8.35□□□□□ -1.07
HDAC3-207ENST00000475549 ASTN1O14525 1302 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 SYNGAP1Q96PV0 1343 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 A0A1W2PQ45 241 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-207ENST00000475549 A0A1W2PQY0 241 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 SOWAHBA6NEL2 793 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 KBTBD13C9JR72 458 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 CTAGE5O15320 804 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 AKR1A1P14550 325 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 PTGS1P23219 599 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 COPB2P35606 906 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 OAZ1P54368 228 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 EPHB4P54760 987 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 SHHQ15465 462 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 ALX1Q15699 326 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 C9orf50Q5SZB4 431 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 TTBK2Q6IQ55 1244 aa8.34□□□□□ -1.07
HDAC3-207ENST00000475549 RCSD1Q6JBY9 416 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms