RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 SATB1Q01826 763 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 IFIT5Q13325 482 aaKnown RBP16.28■□□□□ 0.2
SAMM50-203ENST00000474323 RILPL1Q5EBL4 403 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 EP400NLQ6ZTU2 488 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 TTLL11Q8NHH1 800 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 GREM2Q9H772 168 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 SBF2Q86WG5 1849 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 MYO1FO00160 1098 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 CTSWP56202 376 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 NTRK3Q16288 839 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 GSPT2Q8IYD1 628 aaKnown RBP16.28■□□□□ 0.2
SAMM50-203ENST00000474323 JAKMIP2Q96AA8 810 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 GSDMAQ96QA5 445 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
SAMM50-203ENST00000474323 NIP7Q9Y221 180 aaKnown RBP eCLIP16.28■□□□□ 0.2
SAMM50-203ENST00000474323 ZNF831Q5JPB2 1677 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 SRGAP2O75044 1071 aa16.27■□□□□ 0.2
SAMM50-203ENST00000474323 SPAG1Q07617 926 aa16.27■□□□□ 0.2
SAMM50-203ENST00000474323 SAFBQ15424 915 aaKnown RBP eCLIP16.27■□□□□ 0.2
SAMM50-203ENST00000474323 ALS2CLQ60I27 953 aa16.27■□□□□ 0.2
SAMM50-203ENST00000474323 APOA5Q6Q788 366 aa16.27■□□□□ 0.2
SAMM50-203ENST00000474323 ZKSCAN4Q969J2 545 aaPredicted RBP16.27■□□□□ 0.2
SAMM50-203ENST00000474323 TRIM10Q9UDY6 481 aa16.27■□□□□ 0.2
SAMM50-203ENST00000474323 MCM8Q9UJA3 840 aa16.27■□□□□ 0.2
SAMM50-203ENST00000474323 STK36Q9NRP7 1315 aa16.27■□□□□ 0.19
SAMM50-203ENST00000474323 ANO9A1A5B4 782 aa16.27■□□□□ 0.19
SAMM50-203ENST00000474323 RNF225M0QZC1 329 aaPredicted RBP16.27■□□□□ 0.19
SAMM50-203ENST00000474323 ITGA6P23229 1130 aa16.27■□□□□ 0.19
SAMM50-203ENST00000474323 KRT31Q15323 416 aa16.27■□□□□ 0.19
SAMM50-203ENST00000474323 PREPLQ4J6C6 727 aaPredicted RBP16.27■□□□□ 0.19
SAMM50-203ENST00000474323 CAGE1Q8TC20 777 aa16.27■□□□□ 0.19
SAMM50-203ENST00000474323 CAPZA3Q96KX2 299 aa16.27■□□□□ 0.19
SAMM50-203ENST00000474323 RABEP2Q9H5N1 569 aa16.27■□□□□ 0.19
SAMM50-203ENST00000474323 CEP131Q9UPN4 1083 aa16.27■□□□□ 0.19
SAMM50-203ENST00000474323 TMCO5BA8MYB1 307 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 PPP1R3GB7ZBB8 358 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 SH2B2O14492 632 aaPredicted RBP16.26■□□□□ 0.19
SAMM50-203ENST00000474323 CIAO1O76071 339 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 ELF1P32519 619 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 CCT6AP40227 531 aaKnown RBP16.26■□□□□ 0.19
SAMM50-203ENST00000474323 WASHC4Q2M389 1173 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 CCDC122Q5T0U0 273 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 SND1Q7KZF4 910 aaKnown RBP eCLIP16.26■□□□□ 0.19
SAMM50-203ENST00000474323 WASF1Q92558 559 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 CHP1Q99653 195 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 CCDC189A1A4V9 331 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 RAD21O60216 631 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 PDE8AO60658 829 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 SMTNP53814 917 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 KRT83P78385 493 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 PLCB4Q15147 1175 aa16.26■□□□□ 0.19
SAMM50-203ENST00000474323 FOXP1Q9H334 677 aaPredicted RBP16.26■□□□□ 0.19
SAMM50-203ENST00000474323 CNTNAP4Q9C0A0 1308 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 BTBD18B2RXH4 712 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 ZBTB43O43298 467 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 KRT86O43790 486 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 MMP1P03956 469 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 CDC25AP30304 524 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 SH3RF1Q7Z6J0 888 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 MMGT1Q8N4V1 131 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 OR8K1Q8NGG5 319 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 MIEF2Q96C03 454 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 CEP126Q9P2H0 1117 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 GGA2Q9UJY4 613 aa16.25■□□□□ 0.19
SAMM50-203ENST00000474323 RANBP6O60518 1105 aaKnown RBP16.24■□□□□ 0.19
SAMM50-203ENST00000474323 COPB1P53618 953 aaKnown RBP16.24■□□□□ 0.19
SAMM50-203ENST00000474323 ITIH3Q06033 890 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 SSRP1Q08945 709 aaKnown RBP16.24■□□□□ 0.19
SAMM50-203ENST00000474323 RUFY1Q96T51 708 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 KLC4Q9NSK0 619 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 ANKRD18BA2A2Z9 1011 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 GNPATO15228 680 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 RXRAP19793 462 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 WLSQ5T9L3 541 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 EMBQ6PCB8 327 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 MICU3Q86XE3 530 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 APPBP2Q92624 585 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 PAGE5Q96GU1 130 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 CSRNP2Q9H175 543 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 VEZTQ9HBM0 779 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 IQSEC3Q9UPP2 1182 aaPredicted RBP16.24■□□□□ 0.19
SAMM50-203ENST00000474323 ZNF652Q9Y2D9 606 aa16.24■□□□□ 0.19
SAMM50-203ENST00000474323 PDE2AO00408 941 aaPredicted RBP16.23■□□□□ 0.19
SAMM50-203ENST00000474323 HSF2BPO75031 334 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 NF2P35240 595 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 EPHB4P54760 987 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 DPYDQ12882 1025 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 TTC19Q6DKK2 380 aaPredicted RBP16.23■□□□□ 0.19
SAMM50-203ENST00000474323 LDHAL6AQ6ZMR3 332 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 DIS3L2Q8IYB7 885 aaKnown RBP16.23■□□□□ 0.19
SAMM50-203ENST00000474323 EPN3Q9H201 632 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 VPS16Q9H269 839 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 VCPKMTQ9H867 229 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 CD248Q9HCU0 757 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 AATFQ9NY61 560 aaKnown RBP eCLIP16.23■□□□□ 0.19
SAMM50-203ENST00000474323 BCORQ6W2J9 1755 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 FMNL1O95466 1100 aaPredicted RBP16.23■□□□□ 0.19
SAMM50-203ENST00000474323 AFMP43652 599 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms