RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 SYNGAP1Q96PV0 1343 aa13.83□□□□□ -0.2
EXOSC1-207ENST00000474309 MYH7P12883 1935 aa13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 DNAJC25-GNG10A0A024R161 153 aa13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 ACLYP53396 1101 aa13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 FPGSQ05932 587 aa13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 FAAP100Q0VG06 881 aa13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 CCSAPQ6IQ19 270 aaPredicted RBP13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 MYLIPQ8WY64 445 aa13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 DDX11Q96FC9 970 aa13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 RNPC3Q96LT9 517 aaKnown RBP13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 SLF1Q9BQI6 1058 aa13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 TEX13BQ9BXU2 312 aa13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 PUS7LQ9H0K6 701 aaKnown RBP13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 STARD7Q9NQZ5 370 aa13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 ARPP21Q9UBL0 812 aaPredicted RBP13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 TTC28Q96AY4 2481 aa13.82□□□□□ -0.2
EXOSC1-207ENST00000474309 F5H6K3 240 aa13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 DUSP11O75319 330 aaKnown RBP13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 SNAI1O95863 264 aaPredicted RBP13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 TIMP1P01033 207 aa13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 CST5P28325 142 aaPredicted RBP13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 EPHB4P54760 987 aa13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 KLRC3Q07444 240 aa13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 KCNA10Q16322 511 aa13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 SYMPKQ92797 1274 aaKnown RBP13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 MKL1Q969V6 931 aa13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 STRBPQ96SI9 672 aaKnown RBP13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 ELP1O95163 1332 aa13.81□□□□□ -0.2
EXOSC1-207ENST00000474309 RAD21O60216 631 aa13.8□□□□□ -0.2
EXOSC1-207ENST00000474309 PQBP1O60828 265 aaKnown RBP13.8□□□□□ -0.2
EXOSC1-207ENST00000474309 ZBED4O75132 1171 aa13.8□□□□□ -0.2
EXOSC1-207ENST00000474309 FOSL2P15408 326 aa13.8□□□□□ -0.2
EXOSC1-207ENST00000474309 RASA1P20936 1047 aa13.8□□□□□ -0.2
EXOSC1-207ENST00000474309 CDK7P50613 346 aa13.8□□□□□ -0.2
EXOSC1-207ENST00000474309 PCSK9Q8NBP7 692 aaKnown RBP13.8□□□□□ -0.2
EXOSC1-207ENST00000474309 ABHD16BQ9H3Z7 469 aa13.8□□□□□ -0.2
EXOSC1-207ENST00000474309 MKNK2Q9HBH9 465 aa13.8□□□□□ -0.2
EXOSC1-207ENST00000474309 SYNPO2Q9UMS6 1093 aa13.8□□□□□ -0.2
EXOSC1-207ENST00000474309 MROH7Q68CQ1 1323 aa13.8□□□□□ -0.2
EXOSC1-207ENST00000474309 GSG1L2A8MUP6 293 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 CHGBP05060 677 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 FDX1P10109 184 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 ACVR2BQ13705 512 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 SNRNP48Q6IEG0 339 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 MFSD5Q6N075 450 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 CCDC174Q6PII3 467 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 CHST13Q8NET6 341 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 GLT1D1Q96MS3 346 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 SPC25Q9HBM1 224 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 ZNF287Q9HBT7 754 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 FBXO40Q9UH90 709 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 FEM1BQ9UK73 627 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 COG6Q9Y2V7 657 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 RIPK3Q9Y572 518 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 GREB1LQ9C091 1923 aaPredicted RBP13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 SYNRGQ9UMZ2 1314 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 NCOR1O75376 2440 aa13.79□□□□□ -0.2
EXOSC1-207ENST00000474309 PRUNE2Q8WUY3 3088 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 IGKV6D-41A0A0C4DH26 115 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 NDUFB10O96000 172 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 OAZ1P54368 228 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 GJA9P57773 515 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 NKX3-2P78367 333 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 PPIGQ13427 754 aaKnown RBP eCLIP13.78□□□□□ -0.29e-6■■□□□ 12.8
EXOSC1-207ENST00000474309 ZNF444Q8N0Y2 327 aaPredicted RBP13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 LRRCC1Q9C099 1032 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 BCL11AQ9H165 835 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 UPF3AQ9H1J1 476 aaKnown RBP13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 SLC38A10Q9HBR0 1119 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 CLIP2Q9UDT6 1046 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 TBX21Q9UL17 535 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 CTDP1Q9Y5B0 961 aaPredicted RBP13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 MCM3APO60318 1980 aa13.78□□□□□ -0.2
EXOSC1-207ENST00000474309 ARVCFO00192 962 aa13.77□□□□□ -0.21
EXOSC1-207ENST00000474309 GNAT2P19087 354 aa13.77□□□□□ -0.21
EXOSC1-207ENST00000474309 DNAJB2P25686 324 aa13.77□□□□□ -0.21
EXOSC1-207ENST00000474309 GRIN2CQ14957 1233 aa13.77□□□□□ -0.21
EXOSC1-207ENST00000474309 LENG1Q96BZ8 264 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-207ENST00000474309 NUP88Q99567 741 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-207ENST00000474309 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.21
EXOSC1-207ENST00000474309 ZNF576Q9H609 170 aa13.77□□□□□ -0.21
EXOSC1-207ENST00000474309 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-207ENST00000474309 ZHX1Q9UKY1 873 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-207ENST00000474309 VCANP13611 3396 aa13.77□□□□□ -0.21
EXOSC1-207ENST00000474309 MYH4Q9Y623 1939 aa13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 A0A0U1RQG5 324 aaPredicted RBP13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 MINDY4BA8MYZ0 360 aa13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 ASGR1P07306 291 aa13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 ZFYP08048 801 aaPredicted RBP13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 C6orf222P0C671 652 aaPredicted RBP13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 CCDC144BQ3MJ40 725 aa13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 GNASQ5JWF2 1037 aa13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 TMEM240Q5SV17 173 aa13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 RASIP1Q5U651 963 aa13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 CPXCR1Q8N123 301 aa13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 ANKRD35Q8N283 1001 aa13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 TMEM199Q8N511 208 aa13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 KBTBD3Q8NAB2 608 aa13.76□□□□□ -0.21
EXOSC1-207ENST00000474309 APPBP2Q92624 585 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms