RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 MAMDC4Q6UXC1 1216 aa19.7■□□□□ 0.74
HPS4-210ENST00000473782 TMEM179Q6ZVK1 233 aa19.7■□□□□ 0.74
HPS4-210ENST00000473782 GLT1D1Q96MS3 346 aa19.7■□□□□ 0.74
HPS4-210ENST00000473782 UPF3AQ9H1J1 476 aaKnown RBP19.7■□□□□ 0.74
HPS4-210ENST00000473782 CNPY2Q9Y2B0 182 aa19.7■□□□□ 0.74
HPS4-210ENST00000473782 DNAJC25-GNG10A0A024R161 153 aa19.69■□□□□ 0.74
HPS4-210ENST00000473782 SMIM22K7EJ46 135 aa19.69■□□□□ 0.74
HPS4-210ENST00000473782 VWA5AO00534 786 aa19.69■□□□□ 0.74
HPS4-210ENST00000473782 TLL1O43897 1013 aa19.69■□□□□ 0.74
HPS4-210ENST00000473782 POLR3DP05423 398 aaPredicted RBP19.69■□□□□ 0.74
HPS4-210ENST00000473782 AKR1B1P15121 316 aa19.69■□□□□ 0.74
HPS4-210ENST00000473782 POU3F3P20264 500 aaPredicted RBP19.69■□□□□ 0.74
HPS4-210ENST00000473782 STAT3P40763 770 aa19.69■□□□□ 0.74
HPS4-210ENST00000473782 KCTD2Q14681 263 aa19.69■□□□□ 0.74
HPS4-210ENST00000473782 SAMD1Q6SPF0 538 aaPredicted RBP19.69■□□□□ 0.74
HPS4-210ENST00000473782 MICALL1Q8N3F8 863 aa19.69■□□□□ 0.74
HPS4-210ENST00000473782 ARHGAP45Q92619 1136 aa19.69■□□□□ 0.74
HPS4-210ENST00000473782 HCN4Q9Y3Q4 1203 aa19.69■□□□□ 0.74
HPS4-210ENST00000473782 A0A0U1RQG5 324 aaPredicted RBP19.68■□□□□ 0.74
HPS4-210ENST00000473782 RFXAPO00287 272 aa19.68■□□□□ 0.74
HPS4-210ENST00000473782 WDR46O15213 610 aaKnown RBP19.68■□□□□ 0.74
HPS4-210ENST00000473782 ANP32CO43423 234 aa19.68■□□□□ 0.74
HPS4-210ENST00000473782 FGBP02675 491 aa19.68■□□□□ 0.74
HPS4-210ENST00000473782 RARSP54136 660 aaKnown RBP19.68■□□□□ 0.74
HPS4-210ENST00000473782 TMEM31Q5JXX7 168 aa19.68■□□□□ 0.74
HPS4-210ENST00000473782 OTOP2Q7RTS6 562 aa19.68■□□□□ 0.74
HPS4-210ENST00000473782 MSL3Q8N5Y2 521 aaKnown RBP19.68■□□□□ 0.74
HPS4-210ENST00000473782 SLC43A3Q8NBI5 491 aa19.68■□□□□ 0.74
HPS4-210ENST00000473782 EAF2Q96CJ1 260 aaPredicted RBP19.68■□□□□ 0.74
HPS4-210ENST00000473782 DYNLL2Q96FJ2 89 aa19.68■□□□□ 0.74
HPS4-210ENST00000473782 FGD4Q96M96 766 aa19.68■□□□□ 0.74
HPS4-210ENST00000473782 CCDC8Q9H0W5 538 aaPredicted RBP19.68■□□□□ 0.74
HPS4-210ENST00000473782 TSPYL2Q9H2G4 693 aaPredicted RBP19.68■□□□□ 0.74
HPS4-210ENST00000473782 MTCH2Q9Y6C9 303 aa19.68■□□□□ 0.74
HPS4-210ENST00000473782 GPR37L1O60883 481 aa19.67■□□□□ 0.74
HPS4-210ENST00000473782 GJA9P57773 515 aa19.67■□□□□ 0.74
HPS4-210ENST00000473782 RIPK3Q9Y572 518 aa19.67■□□□□ 0.74
HPS4-210ENST00000473782 EPOPA6NHQ4 379 aa19.66■□□□□ 0.74
HPS4-210ENST00000473782 CT47B1P0C2W7 299 aaPredicted RBP19.66■□□□□ 0.74
HPS4-210ENST00000473782 C6orf222P0C671 652 aaPredicted RBP19.66■□□□□ 0.74
HPS4-210ENST00000473782 NKX3-2P78367 333 aa19.66■□□□□ 0.74
HPS4-210ENST00000473782 ICA1Q05084 483 aa19.66■□□□□ 0.74
HPS4-210ENST00000473782 AAK1Q2M2I8 961 aa19.66■□□□□ 0.74
HPS4-210ENST00000473782 PPP2R2DQ66LE6 453 aa19.66■□□□□ 0.74
HPS4-210ENST00000473782 KRT40Q6A162 431 aa19.66■□□□□ 0.74
HPS4-210ENST00000473782 PCSK9Q8NBP7 692 aaKnown RBP19.66■□□□□ 0.74
HPS4-210ENST00000473782 SSH3Q8TE77 659 aa19.66■□□□□ 0.74
HPS4-210ENST00000473782 DCP1AQ9NPI6 582 aaPredicted RBP19.66■□□□□ 0.74
HPS4-210ENST00000473782 MCM9Q9NXL9 1143 aa19.66■□□□□ 0.74
HPS4-210ENST00000473782 ZHX1Q9UKY1 873 aaPredicted RBP19.66■□□□□ 0.74
HPS4-210ENST00000473782 PPP1R9AQ9ULJ8 1098 aa19.66■□□□□ 0.74
HPS4-210ENST00000473782 ACVR2BQ13705 512 aa19.65■□□□□ 0.74
HPS4-210ENST00000473782 SDR42E1Q8WUS8 393 aa19.65■□□□□ 0.74
HPS4-210ENST00000473782 KATNBL1Q9H079 304 aa19.65■□□□□ 0.74
HPS4-210ENST00000473782 WNT8AQ9H1J5 351 aa19.65■□□□□ 0.74
HPS4-210ENST00000473782 ARHGEF10LQ9HCE6 1279 aa19.65■□□□□ 0.74
HPS4-210ENST00000473782 CD320Q9NPF0 282 aa19.65■□□□□ 0.74
HPS4-210ENST00000473782 PCDHA11Q9Y5I1 949 aa19.65■□□□□ 0.74
HPS4-210ENST00000473782 GRIN2DO15399 1336 aa19.65■□□□□ 0.74
HPS4-210ENST00000473782 MAGEB6P1A0A0J9YX57 407 aa19.64■□□□□ 0.73
HPS4-210ENST00000473782 FAM86C2PA6NEL3 165 aa19.64■□□□□ 0.73
HPS4-210ENST00000473782 APBB1O00213 710 aa19.64■□□□□ 0.73
HPS4-210ENST00000473782 CCDC144BQ3MJ40 725 aa19.64■□□□□ 0.73
HPS4-210ENST00000473782 GNASQ5JWF2 1037 aa19.64■□□□□ 0.73
HPS4-210ENST00000473782 TMED8Q6PL24 325 aaPredicted RBP19.64■□□□□ 0.73
HPS4-210ENST00000473782 ALYREFQ86V81 257 aaKnown RBP19.64■□□□□ 0.73
HPS4-210ENST00000473782 VTI1AQ96AJ9 217 aa19.64■□□□□ 0.73
HPS4-210ENST00000473782 NOP58Q9Y2X3 529 aaKnown RBP19.64■□□□□ 0.73
HPS4-210ENST00000473782 ASTN1O14525 1302 aa19.64■□□□□ 0.73
HPS4-210ENST00000473782 NAV1Q8NEY1 1877 aa19.64■□□□□ 0.73
HPS4-210ENST00000473782 TRIM27P14373 513 aa19.63■□□□□ 0.73
HPS4-210ENST00000473782 CCL23P55773 120 aa19.63■□□□□ 0.73
HPS4-210ENST00000473782 HIPK3Q9H422 1215 aa19.63■□□□□ 0.73
HPS4-210ENST00000473782 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.63■□□□□ 0.73
HPS4-210ENST00000473782 TLR3O15455 904 aaKnown RBP19.62■□□□□ 0.73
HPS4-210ENST00000473782 SURF6O75683 361 aaKnown RBP19.62■□□□□ 0.73
HPS4-210ENST00000473782 BCAR3O75815 825 aa19.62■□□□□ 0.73
HPS4-210ENST00000473782 ARHGEF15O94989 841 aa19.62■□□□□ 0.73
HPS4-210ENST00000473782 EEF2P13639 858 aaKnown RBP19.62■□□□□ 0.73
HPS4-210ENST00000473782 ATP8B2P98198 1209 aa19.62■□□□□ 0.73
HPS4-210ENST00000473782 BEX3Q00994 111 aa19.62■□□□□ 0.73
HPS4-210ENST00000473782 ZNF467Q7Z7K2 595 aaPredicted RBP19.62■□□□□ 0.73
HPS4-210ENST00000473782 NOC4LQ9BVI4 516 aaKnown RBP19.62■□□□□ 0.73
HPS4-210ENST00000473782 MTIF3Q9H2K0 278 aaKnown RBP19.62■□□□□ 0.73
HPS4-210ENST00000473782 SWAP70Q9UH65 585 aa19.62■□□□□ 0.73
HPS4-210ENST00000473782 TCRBV5S4A2TA0A5A2 114 aa19.61■□□□□ 0.73
HPS4-210ENST00000473782 PTGS1P23219 599 aa19.61■□□□□ 0.73
HPS4-210ENST00000473782 COPB2P35606 906 aa19.61■□□□□ 0.73
HPS4-210ENST00000473782 SKIV2LQ15477 1246 aaKnown RBP19.61■□□□□ 0.73
HPS4-210ENST00000473782 FAM83BQ5T0W9 1011 aa19.61■□□□□ 0.73
HPS4-210ENST00000473782 LCORLQ8N3X6 602 aa19.61■□□□□ 0.73
HPS4-210ENST00000473782 AGBL1Q96MI9 1066 aa19.61■□□□□ 0.73
HPS4-210ENST00000473782 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.61■□□□□ 0.73
HPS4-210ENST00000473782 CRNKL1Q9BZJ0 848 aaKnown RBP19.61■□□□□ 0.73
HPS4-210ENST00000473782 SH2D4AQ9H788 454 aa19.61■□□□□ 0.73
HPS4-210ENST00000473782 COG5Q9UP83 839 aa19.61■□□□□ 0.73
HPS4-210ENST00000473782 SLC4A7Q9Y6M7 1214 aa19.61■□□□□ 0.73
HPS4-210ENST00000473782 LRRC37A2A6NM11 1700 aa19.61■□□□□ 0.73
HPS4-210ENST00000473782 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.6■□□□□ 0.73
HPS4-210ENST00000473782 PI4K2BG5E9Z4 385 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms