RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SENP6Q9GZR1 1112 aaPredicted RBP18.19■□□□□ 0.5
VTI1A-203ENST00000472892 NRBP1Q9UHY1 535 aa18.19■□□□□ 0.5
VTI1A-203ENST00000472892 SYN1P17600 705 aa18.18■□□□□ 0.5
VTI1A-203ENST00000472892 HELLSQ9NRZ9 838 aa18.18■□□□□ 0.5
VTI1A-203ENST00000472892 FEM1BQ9UK73 627 aa18.18■□□□□ 0.5
VTI1A-203ENST00000472892 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.18■□□□□ 0.5
VTI1A-203ENST00000472892 RIPK3Q9Y572 518 aa18.18■□□□□ 0.5
VTI1A-203ENST00000472892 SZT2Q5T011 3432 aa18.18■□□□□ 0.5
VTI1A-203ENST00000472892 COL11A1P12107 1806 aaPredicted RBP18.17■□□□□ 0.5
VTI1A-203ENST00000472892 ZBED4O75132 1171 aa18.17■□□□□ 0.5
VTI1A-203ENST00000472892 ALX1Q15699 326 aa18.17■□□□□ 0.5
VTI1A-203ENST00000472892 SNRNP48Q6IEG0 339 aaKnown RBP18.17■□□□□ 0.5
VTI1A-203ENST00000472892 TINF2Q9BSI4 451 aa18.17■□□□□ 0.5
VTI1A-203ENST00000472892 ANAPC4Q9UJX5 808 aa18.17■□□□□ 0.5
VTI1A-203ENST00000472892 MAGEA10P43363 369 aaPredicted RBP18.16■□□□□ 0.5
VTI1A-203ENST00000472892 CTDSPL2Q05D32 466 aa18.16■□□□□ 0.5
VTI1A-203ENST00000472892 PPP4R3BQ5MIZ7 849 aa18.16■□□□□ 0.5
VTI1A-203ENST00000472892 GJC2Q5T442 439 aaPredicted RBP18.16■□□□□ 0.5
VTI1A-203ENST00000472892 VPS53Q5VIR6 699 aa18.16■□□□□ 0.5
VTI1A-203ENST00000472892 ANO1Q5XXA6 986 aa18.16■□□□□ 0.5
VTI1A-203ENST00000472892 SLFN13Q68D06 897 aa18.16■□□□□ 0.5
VTI1A-203ENST00000472892 SMC5Q8IY18 1101 aa18.16■□□□□ 0.5
VTI1A-203ENST00000472892 LRRC47Q8N1G4 583 aaKnown RBP18.16■□□□□ 0.5
VTI1A-203ENST00000472892 KIFC2Q96AC6 838 aa18.16■□□□□ 0.5
VTI1A-203ENST00000472892 RWDD1Q9H446 243 aaPredicted RBP18.16■□□□□ 0.5
VTI1A-203ENST00000472892 SLC38A10Q9HBR0 1119 aa18.16■□□□□ 0.5
VTI1A-203ENST00000472892 INCENPQ9NQS7 918 aa18.16■□□□□ 0.5
VTI1A-203ENST00000472892 FRMPD3Q5JV73 1810 aa18.15■□□□□ 0.5
VTI1A-203ENST00000472892 FGRP09769 529 aa18.15■□□□□ 0.5
VTI1A-203ENST00000472892 BMP3P12645 472 aa18.15■□□□□ 0.5
VTI1A-203ENST00000472892 OAZ1P54368 228 aa18.15■□□□□ 0.5
VTI1A-203ENST00000472892 MCMDC2Q4G0Z9 681 aa18.15■□□□□ 0.5
VTI1A-203ENST00000472892 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.15■□□□□ 0.5
VTI1A-203ENST00000472892 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
VTI1A-203ENST00000472892 MSL3Q8N5Y2 521 aaKnown RBP18.15■□□□□ 0.5
VTI1A-203ENST00000472892 LNPKQ9C0E8 428 aa18.15■□□□□ 0.5
VTI1A-203ENST00000472892 IL17RBQ9NRM6 502 aa18.15■□□□□ 0.5
VTI1A-203ENST00000472892 TACC3Q9Y6A5 838 aa18.15■□□□□ 0.5
VTI1A-203ENST00000472892 ZNFX1Q9P2E3 1918 aaKnown RBP18.15■□□□□ 0.5
VTI1A-203ENST00000472892 DNAJC25-GNG10A0A024R161 153 aa18.14■□□□□ 0.49
VTI1A-203ENST00000472892 FDX1P10109 184 aa18.14■□□□□ 0.49
VTI1A-203ENST00000472892 GMCL1Q96IK5 515 aa18.14■□□□□ 0.49
VTI1A-203ENST00000472892 FAM227BQ96M60 508 aa18.14■□□□□ 0.49
VTI1A-203ENST00000472892 RAVER2Q9HCJ3 691 aaKnown RBP18.14■□□□□ 0.49
VTI1A-203ENST00000472892 CTDP1Q9Y5B0 961 aaPredicted RBP18.14■□□□□ 0.49
VTI1A-203ENST00000472892 A0A0D9SFI3 127 aa18.13■□□□□ 0.49
VTI1A-203ENST00000472892 TSPY2A6NKD2 308 aa18.13■□□□□ 0.49
VTI1A-203ENST00000472892 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
VTI1A-203ENST00000472892 KBTBD13C9JR72 458 aa18.13■□□□□ 0.49
VTI1A-203ENST00000472892 SOX1O00570 391 aaPredicted RBP18.13■□□□□ 0.49
VTI1A-203ENST00000472892 ORC4O43929 436 aa18.13■□□□□ 0.49
VTI1A-203ENST00000472892 FGAP02671 866 aa18.13■□□□□ 0.49
VTI1A-203ENST00000472892 ZNF865P0CJ78 1059 aaPredicted RBP18.13■□□□□ 0.49
VTI1A-203ENST00000472892 TAL1P17542 331 aaPredicted RBP18.13■□□□□ 0.49
VTI1A-203ENST00000472892 NOVP48745 357 aa18.13■□□□□ 0.49
VTI1A-203ENST00000472892 ATN1P54259 1190 aaPredicted RBP18.13■□□□□ 0.49
VTI1A-203ENST00000472892 LRRC41Q15345 812 aa18.13■□□□□ 0.49
VTI1A-203ENST00000472892 MAMDC4Q6UXC1 1216 aa18.13■□□□□ 0.49
VTI1A-203ENST00000472892 DDX11Q96FC9 970 aa18.13■□□□□ 0.49
VTI1A-203ENST00000472892 MYH4Q9Y623 1939 aa18.13■□□□□ 0.49
VTI1A-203ENST00000472892 NMT2O60551 498 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 PLA2G6O60733 806 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 IGHDP01880 384 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 MCCP23508 829 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 SLC1A4P43007 532 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 B4GALNT3Q6L9W6 998 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 SLC39A5Q6ZMH5 540 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 ZNF467Q7Z7K2 595 aaPredicted RBP18.12■□□□□ 0.49
VTI1A-203ENST00000472892 CHD1LQ86WJ1 897 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 CHST13Q8NET6 341 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 CHURC1Q8WUH1 139 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 STAG1Q8WVM7 1258 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 FBXO40Q9UH90 709 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 STX8Q9UNK0 236 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 LAMA3Q16787 3333 aa18.12■□□□□ 0.49
VTI1A-203ENST00000472892 DNAH12Q6ZR08 3092 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 RANBP6O60518 1105 aaKnown RBP18.11■□□□□ 0.49
VTI1A-203ENST00000472892 SNAI1O95863 264 aaPredicted RBP18.11■□□□□ 0.49
VTI1A-203ENST00000472892 HSPD1P10809 573 aaKnown RBP18.11■□□□□ 0.49
VTI1A-203ENST00000472892 RARBP10826 455 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 SLC4A3P48751 1232 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 STAT2P52630 851 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 RTP1P59025 263 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 NUCB1Q02818 461 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 NMIQ13287 307 aaPredicted RBP18.11■□□□□ 0.49
VTI1A-203ENST00000472892 RCSD1Q6JBY9 416 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 FAM160B2Q86V87 743 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 UBE2OQ9C0C9 1292 aaKnown RBP18.11■□□□□ 0.49
VTI1A-203ENST00000472892 OSBPL3Q9H4L5 887 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 XPNPEP3Q9NQH7 507 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 CNPY2Q9Y2B0 182 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 SYNGAP1Q96PV0 1343 aa18.11■□□□□ 0.49
VTI1A-203ENST00000472892 TRIM6-TRIM34B2RNG4 842 aa18.1■□□□□ 0.49
VTI1A-203ENST00000472892 AKR1A1P14550 325 aa18.1■□□□□ 0.49
VTI1A-203ENST00000472892 ADCYAP1R1P41586 468 aa18.1■□□□□ 0.49
VTI1A-203ENST00000472892 SNX17Q15036 470 aa18.1■□□□□ 0.49
VTI1A-203ENST00000472892 LRIT3Q3SXY7 679 aa18.1■□□□□ 0.49
VTI1A-203ENST00000472892 C1orf53Q5VUE5 145 aa18.1■□□□□ 0.49
VTI1A-203ENST00000472892 ZNF589Q86UQ0 364 aaPredicted RBP18.1■□□□□ 0.49
VTI1A-203ENST00000472892 PLEKHM2Q8IWE5 1019 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms