RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 PLA2G6O60733 806 aa20.12■□□□□ 0.81
COMMD3-210ENST00000472610 IMMTQ16891 758 aaKnown RBP20.12■□□□□ 0.81
COMMD3-210ENST00000472610 RCSD1Q6JBY9 416 aa20.12■□□□□ 0.81
COMMD3-210ENST00000472610 CENPQQ7L2Z9 268 aaPredicted RBP20.12■□□□□ 0.81
COMMD3-210ENST00000472610 FAM160B2Q86V87 743 aa20.12■□□□□ 0.81
COMMD3-210ENST00000472610 NPLOC4Q8TAT6 608 aa20.12■□□□□ 0.81
COMMD3-210ENST00000472610 ESR2Q92731 530 aa20.12■□□□□ 0.81
COMMD3-210ENST00000472610 KIFC2Q96AC6 838 aa20.12■□□□□ 0.81
COMMD3-210ENST00000472610 TEX13BQ9BXU2 312 aa20.12■□□□□ 0.81
COMMD3-210ENST00000472610 NBPF3Q9H094 633 aa20.12■□□□□ 0.81
COMMD3-210ENST00000472610 TMEM232C9JQI7 657 aa20.11■□□□□ 0.81
COMMD3-210ENST00000472610 TOP1P11387 765 aaKnown RBP20.11■□□□□ 0.81
COMMD3-210ENST00000472610 MCCP23508 829 aa20.11■□□□□ 0.81
COMMD3-210ENST00000472610 CHMLP26374 656 aa20.11■□□□□ 0.81
COMMD3-210ENST00000472610 STAT2P52630 851 aa20.11■□□□□ 0.81
COMMD3-210ENST00000472610 OLFML2BQ68BL8 750 aa20.11■□□□□ 0.81
COMMD3-210ENST00000472610 TBC1D10CQ8IV04 446 aa20.11■□□□□ 0.81
COMMD3-210ENST00000472610 ANKLE1Q8NAG6 615 aa20.11■□□□□ 0.81
COMMD3-210ENST00000472610 SLC38A10Q9HBR0 1119 aa20.11■□□□□ 0.81
COMMD3-210ENST00000472610 ISY1Q9ULR0 285 aaKnown RBP20.11■□□□□ 0.81
COMMD3-210ENST00000472610 PDE4DIPQ5VU43 2346 aa20.11■□□□□ 0.81
COMMD3-210ENST00000472610 OAZ1P54368 228 aa20.1■□□□□ 0.81
COMMD3-210ENST00000472610 KCTD2Q14681 263 aa20.1■□□□□ 0.81
COMMD3-210ENST00000472610 CCDC178Q5BJE1 867 aa20.1■□□□□ 0.81
COMMD3-210ENST00000472610 PRPF38BQ5VTL8 546 aaKnown RBP20.1■□□□□ 0.81
COMMD3-210ENST00000472610 SNRNP48Q6IEG0 339 aaKnown RBP20.1■□□□□ 0.81
COMMD3-210ENST00000472610 UBE2Q1Q7Z7E8 422 aa20.1■□□□□ 0.81
COMMD3-210ENST00000472610 MMP19Q99542 508 aa20.1■□□□□ 0.81
COMMD3-210ENST00000472610 FLRT1Q9NZU1 646 aa20.1■□□□□ 0.81
COMMD3-210ENST00000472610 COBLO75128 1261 aa20.09■□□□□ 0.81
COMMD3-210ENST00000472610 FARP2O94887 1054 aaPredicted RBP20.09■□□□□ 0.81
COMMD3-210ENST00000472610 IKQ13123 557 aaPredicted RBP20.09■□□□□ 0.81
COMMD3-210ENST00000472610 CPXCR1Q8N123 301 aa20.09■□□□□ 0.81
COMMD3-210ENST00000472610 DCAF4Q8WV16 495 aa20.09■□□□□ 0.81
COMMD3-210ENST00000472610 HTATIP2Q9BUP3 242 aa20.09■□□□□ 0.81
COMMD3-210ENST00000472610 IQCA1Q86XH1 822 aa20.08■□□□□ 0.81
COMMD3-210ENST00000472610 TMEM47Q9BQJ4 181 aa20.08■□□□□ 0.81
COMMD3-210ENST00000472610 KRT23Q9C075 422 aa20.08■□□□□ 0.81
COMMD3-210ENST00000472610 CNNM2Q9H8M5 875 aa20.08■□□□□ 0.81
COMMD3-210ENST00000472610 DIS3Q9Y2L1 958 aaKnown RBP20.08■□□□□ 0.81
COMMD3-210ENST00000472610 NEDD4P46934 1319 aa20.07■□□□□ 0.8
COMMD3-210ENST00000472610 IGHA2P01877 340 aa20.07■□□□□ 0.8
COMMD3-210ENST00000472610 CCND3P30281 292 aaPredicted RBP20.07■□□□□ 0.8
COMMD3-210ENST00000472610 KCTD1Q719H9 257 aa20.07■□□□□ 0.8
COMMD3-210ENST00000472610 DGKHQ86XP1 1220 aa20.07■□□□□ 0.8
COMMD3-210ENST00000472610 IL25Q9H293 177 aa20.07■□□□□ 0.8
COMMD3-210ENST00000472610 RAVER2Q9HCJ3 691 aaKnown RBP20.07■□□□□ 0.8
COMMD3-210ENST00000472610 FBXO40Q9UH90 709 aa20.07■□□□□ 0.8
COMMD3-210ENST00000472610 OGDHLQ9ULD0 1010 aa20.07■□□□□ 0.8
COMMD3-210ENST00000472610 MSCO60682 206 aa20.06■□□□□ 0.8
COMMD3-210ENST00000472610 CYP2C19P33261 490 aa20.06■□□□□ 0.8
COMMD3-210ENST00000472610 CHST13Q8NET6 341 aa20.06■□□□□ 0.8
COMMD3-210ENST00000472610 MAML3Q96JK9 1138 aa20.06■□□□□ 0.8
COMMD3-210ENST00000472610 MTMR7Q9Y216 660 aa20.06■□□□□ 0.8
COMMD3-210ENST00000472610 RIPK3Q9Y572 518 aa20.06■□□□□ 0.8
COMMD3-210ENST00000472610 PLXNA1Q9UIW2 1896 aa20.05■□□□□ 0.8
COMMD3-210ENST00000472610 BRCA2P51587 3418 aa20.05■□□□□ 0.8
COMMD3-210ENST00000472610 SGSM2O43147 1006 aa20.05■□□□□ 0.8
COMMD3-210ENST00000472610 KDM4AO75164 1064 aa20.05■□□□□ 0.8
COMMD3-210ENST00000472610 CNGA1P29973 690 aa20.05■□□□□ 0.8
COMMD3-210ENST00000472610 SLC4A3P48751 1232 aa20.05■□□□□ 0.8
COMMD3-210ENST00000472610 CCDC96Q2M329 555 aa20.05■□□□□ 0.8
COMMD3-210ENST00000472610 ZNF792Q3KQV3 632 aa20.05■□□□□ 0.8
COMMD3-210ENST00000472610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.05■□□□□ 0.8
COMMD3-210ENST00000472610 NECAB2Q7Z6G3 386 aa20.05■□□□□ 0.8
COMMD3-210ENST00000472610 CHMP4CQ96CF2 233 aa20.05■□□□□ 0.8
COMMD3-210ENST00000472610 DDX11Q96FC9 970 aa20.05■□□□□ 0.8
COMMD3-210ENST00000472610 B4E1Z4 1266 aa20.04■□□□□ 0.8
COMMD3-210ENST00000472610 TKFCQ3LXA3 575 aa20.04■□□□□ 0.8
COMMD3-210ENST00000472610 LHX8Q68G74 356 aa20.04■□□□□ 0.8
COMMD3-210ENST00000472610 BTNL9Q6UXG8 535 aa20.04■□□□□ 0.8
COMMD3-210ENST00000472610 DPF3Q92784 378 aa20.04■□□□□ 0.8
COMMD3-210ENST00000472610 ZSWIM5Q9P217 1185 aa20.04■□□□□ 0.8
COMMD3-210ENST00000472610 PRR12Q9ULL5 1215 aa20.04■□□□□ 0.8
COMMD3-210ENST00000472610 U3KPZ7 1027 aaPredicted RBP20.04■□□□□ 0.8
COMMD3-210ENST00000472610 PGK2P07205 417 aa20.03■□□□□ 0.8
COMMD3-210ENST00000472610 CYBAP13498 195 aa20.03■□□□□ 0.8
COMMD3-210ENST00000472610 ANKS1AQ92625 1134 aa20.03■□□□□ 0.8
COMMD3-210ENST00000472610 PAWRQ96IZ0 340 aaKnown RBP20.03■□□□□ 0.8
COMMD3-210ENST00000472610 ZSCAN10Q96SZ4 725 aaPredicted RBP20.03■□□□□ 0.8
COMMD3-210ENST00000472610 ZKSCAN3Q9BRR0 538 aa20.03■□□□□ 0.8
COMMD3-210ENST00000472610 DDX20Q9UHI6 824 aaKnown RBP20.03■□□□□ 0.8
COMMD3-210ENST00000472610 NRBP1Q9UHY1 535 aa20.03■□□□□ 0.8
COMMD3-210ENST00000472610 PDHBP11177 359 aa20.02■□□□□ 0.8
COMMD3-210ENST00000472610 PTH1RQ03431 593 aa20.02■□□□□ 0.8
COMMD3-210ENST00000472610 TRDNQ13061 729 aa20.02■□□□□ 0.8
COMMD3-210ENST00000472610 ANKRD35Q8N283 1001 aa20.02■□□□□ 0.8
COMMD3-210ENST00000472610 MSL3Q8N5Y2 521 aaKnown RBP20.02■□□□□ 0.8
COMMD3-210ENST00000472610 TINF2Q9BSI4 451 aa20.02■□□□□ 0.8
COMMD3-210ENST00000472610 ZNF536O15090 1300 aa20.02■□□□□ 0.79
COMMD3-210ENST00000472610 DNAJC25-GNG10A0A024R161 153 aa20.01■□□□□ 0.79
COMMD3-210ENST00000472610 SNHG28P0DPA3 235 aa20.01■□□□□ 0.79
COMMD3-210ENST00000472610 BMP2KLQ5H9B9 411 aa20.01■□□□□ 0.79
COMMD3-210ENST00000472610 GPATCH4Q5T3I0 446 aaKnown RBP20.01■□□□□ 0.79
COMMD3-210ENST00000472610 SYDE2Q5VT97 1194 aa20.01■□□□□ 0.79
COMMD3-210ENST00000472610 KIAA1211Q6ZU35 1233 aa20.01■□□□□ 0.79
COMMD3-210ENST00000472610 TRPV1Q8NER1 839 aa20.01■□□□□ 0.79
COMMD3-210ENST00000472610 CCDC136Q96JN2 1154 aa20.01■□□□□ 0.79
COMMD3-210ENST00000472610 UBAC1Q9BSL1 405 aa20.01■□□□□ 0.79
COMMD3-210ENST00000472610 ACAD9Q9H845 621 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms