RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 TTC6Q86TZ1 520 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 ANKLE1Q8NAG6 615 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 SEC62Q99442 399 aaKnown RBP10.93□□□□□ -0.66
SMC4-213ENST00000472282 CRNKL1Q9BZJ0 848 aaKnown RBP10.93□□□□□ -0.66
SMC4-213ENST00000472282 RNF208Q9H0X6 261 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 DCP1AQ9NPI6 582 aaPredicted RBP10.93□□□□□ -0.66
SMC4-213ENST00000472282 MCM9Q9NXL9 1143 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 TMOD4Q9NZQ9 345 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 RBPJLQ9UBG7 517 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 MORF4L1Q9UBU8 362 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 BIN2Q9UBW5 565 aaPredicted RBP10.93□□□□□ -0.66
SMC4-213ENST00000472282 GJD2Q9UKL4 321 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 MYH4Q9Y623 1939 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 CYP2D7A0A087X1C5 515 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 A0A0D9SFI3 127 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 GPAA1O43292 621 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 POLR3DP05423 398 aaPredicted RBP10.92□□□□□ -0.66
SMC4-213ENST00000472282 GJB1P08034 283 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 GJA8P48165 433 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 HERVK_113P62684 666 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 UBXN2AP68543 259 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 IRX3P78415 501 aaPredicted RBP10.92□□□□□ -0.66
SMC4-213ENST00000472282 NMIQ13287 307 aaPredicted RBP10.92□□□□□ -0.66
SMC4-213ENST00000472282 PABPC4Q13310 644 aaKnown RBP eCLIP10.92□□□□□ -0.668e-9■■■■■ 603.5
SMC4-213ENST00000472282 SEPT2Q15019 361 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 RAB3GAP1Q15042 981 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 ABCB5Q2M3G0 1257 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 CERKLQ49MI3 558 aaPredicted RBP10.92□□□□□ -0.66
SMC4-213ENST00000472282 UBE2Q1Q7Z7E8 422 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 CLEC10AQ8IUN9 316 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 PXYLP1Q8TE99 480 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 COA7Q96BR5 231 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 DYNLL2Q96FJ2 89 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 C12orf42Q96LP6 360 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 GINM1Q9NU53 330 aa10.92□□□□□ -0.66
SMC4-213ENST00000472282 A0A1W2PRG0 241 aa10.91□□□□□ -0.66
SMC4-213ENST00000472282 CNMDO75829 334 aa10.91□□□□□ -0.66
SMC4-213ENST00000472282 USP17L2Q6R6M4 530 aa10.91□□□□□ -0.66
SMC4-213ENST00000472282 CCDC129Q6ZRS4 1044 aa10.91□□□□□ -0.66
SMC4-213ENST00000472282 U2AF1L4Q8WU68 220 aaKnown RBP10.91□□□□□ -0.66
SMC4-213ENST00000472282 FAM227BQ96M60 508 aa10.91□□□□□ -0.66
SMC4-213ENST00000472282 PORCNQ9H237 461 aa10.91□□□□□ -0.66
SMC4-213ENST00000472282 DIAPH3Q9NSV4 1193 aa10.91□□□□□ -0.66
SMC4-213ENST00000472282 SLC4A4Q9Y6R1 1079 aa10.91□□□□□ -0.66
SMC4-213ENST00000472282 PLXNA1Q9UIW2 1896 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 TLL1O43897 1013 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 SGPL1O95470 568 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 ADH1BP00325 375 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 VCAM1P19320 739 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 CYP2B6P20813 491 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 BMP2KLQ5H9B9 411 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 KIAA1755Q5JYT7 1200 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 TICAM2Q86XR7 235 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 TRIB2Q92519 343 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 DEFB118Q96PH6 123 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 STRBPQ96SI9 672 aaKnown RBP10.9□□□□□ -0.66
SMC4-213ENST00000472282 FEZ1Q99689 392 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 PAGR1Q9BTK6 254 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 KIAA1683Q9H0B3 1180 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 PAK6Q9NQU5 681 aaPredicted RBP10.9□□□□□ -0.66
SMC4-213ENST00000472282 HELLSQ9NRZ9 838 aa10.9□□□□□ -0.66
SMC4-213ENST00000472282 HIP1O00291 1037 aa10.89□□□□□ -0.67
SMC4-213ENST00000472282 AKR1B1P15121 316 aa10.89□□□□□ -0.67
SMC4-213ENST00000472282 ERVK-9P63128 1117 aa10.89□□□□□ -0.67
SMC4-213ENST00000472282 ERVK-24P63145 666 aa10.89□□□□□ -0.67
SMC4-213ENST00000472282 MCMDC2Q4G0Z9 681 aa10.89□□□□□ -0.67
SMC4-213ENST00000472282 CWC27Q6UX04 472 aaKnown RBP10.89□□□□□ -0.67
SMC4-213ENST00000472282 CATSPERGQ6ZRH7 1159 aa10.89□□□□□ -0.67
SMC4-213ENST00000472282 ZNF589Q86UQ0 364 aaPredicted RBP10.89□□□□□ -0.67
SMC4-213ENST00000472282 SIAH1Q8IUQ4 282 aa10.89□□□□□ -0.67
SMC4-213ENST00000472282 GPRC5AQ8NFJ5 357 aa10.89□□□□□ -0.67
SMC4-213ENST00000472282 CABP5Q9NP86 173 aa10.89□□□□□ -0.67
SMC4-213ENST00000472282 BTBD7Q9P203 1132 aa10.89□□□□□ -0.67
SMC4-213ENST00000472282 ZNF236Q9UL36 1845 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 CCDC171Q6TFL3 1326 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 GSG1L2A8MUP6 293 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP17L15C9J2P7 530 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP17L13C9JLJ4 530 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP17L12C9JPN9 530 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP17L11C9JVI0 530 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP17L21D6R901 530 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP17L18D6R9N7 530 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP17L22D6RA61 530 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP17L17D6RBQ6 530 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP17L19D6RCP7 530 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP17L20D6RJB6 530 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 H0YGN5 161 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 MPHOSPH10O00566 681 aaKnown RBP10.88□□□□□ -0.67
SMC4-213ENST00000472282 GNAT2P19087 354 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP17L24Q0WX57 530 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 CCL14Q16627 93 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 C12orf60Q5U649 245 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 GPR142Q7Z601 462 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 DIS3LQ8TF46 1054 aaKnown RBP10.88□□□□□ -0.67
SMC4-213ENST00000472282 USP6NLQ92738 828 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.88□□□□□ -0.671e-147■■■■■ 345.5
SMC4-213ENST00000472282 RPAP3Q9H6T3 665 aaPredicted RBP10.88□□□□□ -0.67
SMC4-213ENST00000472282 EPB41L4AQ9HCS5 686 aaPredicted RBP10.88□□□□□ -0.67
SMC4-213ENST00000472282 ATP8A2Q9NTI2 1148 aa10.88□□□□□ -0.67
SMC4-213ENST00000472282 GTF3C3Q9Y5Q9 886 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms