RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 CTNNA3Q9UI47 895 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 STX8Q9UNK0 236 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 MTMR7Q9Y216 660 aa14.03□□□□□ -0.16
CLRN1-205ENST00000472224 PFASO15067 1338 aa14.02□□□□□ -0.17
CLRN1-205ENST00000472224 NEDD4P46934 1319 aa14.02□□□□□ -0.17
CLRN1-205ENST00000472224 SPDYE16A6NNV3 312 aaPredicted RBP14.02□□□□□ -0.17
CLRN1-205ENST00000472224 WDR46O15213 610 aaKnown RBP14.02□□□□□ -0.17
CLRN1-205ENST00000472224 SGSM2O43147 1006 aa14.02□□□□□ -0.17
CLRN1-205ENST00000472224 BMP2KLQ5H9B9 411 aa14.02□□□□□ -0.17
CLRN1-205ENST00000472224 CCAR1Q8IX12 1150 aaKnown RBP14.02□□□□□ -0.17
CLRN1-205ENST00000472224 GPRC5AQ8NFJ5 357 aa14.02□□□□□ -0.17
CLRN1-205ENST00000472224 STAG1Q8WVM7 1258 aa14.02□□□□□ -0.17
CLRN1-205ENST00000472224 NUP88Q99567 741 aaPredicted RBP14.02□□□□□ -0.17
CLRN1-205ENST00000472224 RNF41Q9H4P4 317 aaPredicted RBP14.02□□□□□ -0.17
CLRN1-205ENST00000472224 NDUFB10O96000 172 aa14.01□□□□□ -0.17
CLRN1-205ENST00000472224 ERVK-9P63128 1117 aa14.01□□□□□ -0.17
CLRN1-205ENST00000472224 ERVK-24P63145 666 aa14.01□□□□□ -0.17
CLRN1-205ENST00000472224 PTH1RQ03431 593 aa14.01□□□□□ -0.17
CLRN1-205ENST00000472224 TRIM32Q13049 653 aa14.01□□□□□ -0.17
CLRN1-205ENST00000472224 WDR78Q5VTH9 848 aa14.01□□□□□ -0.17
CLRN1-205ENST00000472224 COA7Q96BR5 231 aa14.01□□□□□ -0.17
CLRN1-205ENST00000472224 C11orf49Q9H6J7 331 aa14.01□□□□□ -0.17
CLRN1-205ENST00000472224 LTBP2Q14767 1821 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 FRMPD3Q5JV73 1810 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 F5H6K3 240 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 KLRC3Q07444 240 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 PLS1Q14651 629 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 COG2Q14746 738 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 PPP4R3BQ5MIZ7 849 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 ERICH6BQ5W0A0 696 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 CASC1Q6TDU7 716 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 KIAA1211Q6ZU35 1233 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 ESR2Q92731 530 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 ATG4CQ96DT6 458 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 FBXO28Q9NVF7 368 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 RBPJLQ9UBG7 517 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 MORF4L1Q9UBU8 362 aa14□□□□□ -0.17
CLRN1-205ENST00000472224 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
CLRN1-205ENST00000472224 CNMDO75829 334 aa13.99□□□□□ -0.17
CLRN1-205ENST00000472224 PCP11498 1178 aaKnown RBP13.99□□□□□ -0.17
CLRN1-205ENST00000472224 COL9A1P20849 921 aa13.99□□□□□ -0.17
CLRN1-205ENST00000472224 MDM2Q00987 491 aaPredicted RBP13.99□□□□□ -0.17
CLRN1-205ENST00000472224 SLFN13Q68D06 897 aa13.99□□□□□ -0.17
CLRN1-205ENST00000472224 ZKSCAN3Q9BRR0 538 aa13.99□□□□□ -0.17
CLRN1-205ENST00000472224 ESYT1Q9BSJ8 1104 aa13.99□□□□□ -0.17
CLRN1-205ENST00000472224 IL17RBQ9NRM6 502 aa13.99□□□□□ -0.17
CLRN1-205ENST00000472224 BTBD7Q9P203 1132 aa13.99□□□□□ -0.17
CLRN1-205ENST00000472224 RAPGEFL1Q9UHV5 662 aa13.99□□□□□ -0.17
CLRN1-205ENST00000472224 RABGAP1Q9Y3P9 1069 aa13.99□□□□□ -0.17
CLRN1-205ENST00000472224 B4E1Z4 1266 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 KDM4AO75164 1064 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 CDC45O75419 566 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 HMGCRP04035 888 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 FGRP09769 529 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 CCNA1P78396 465 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 IKQ13123 557 aaPredicted RBP13.98□□□□□ -0.17
CLRN1-205ENST00000472224 CCDC96Q2M329 555 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 Q3C1V9 767 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 POTEEQ6S8J3 1075 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 GMCL1P1Q8NEA9 526 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 PORCNQ9H237 461 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 ANO2Q9NQ90 1003 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 HOXC10Q9NYD6 342 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 OGDHLQ9ULD0 1010 aa13.98□□□□□ -0.17
CLRN1-205ENST00000472224 COL6A1P12109 1028 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 MAPK4P31152 587 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 SLC1A4P43007 532 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 LBX2Q6XYB7 198 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 RASGRP2Q7LDG7 609 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 MAFAQ8NHW3 353 aaPredicted RBP13.97□□□□□ -0.17
CLRN1-205ENST00000472224 MKL1Q969V6 931 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 KIFC2Q96AC6 838 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 CDX2Q99626 313 aaPredicted RBP13.97□□□□□ -0.17
CLRN1-205ENST00000472224 SLF1Q9BQI6 1058 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 KRT23Q9C075 422 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 PPP1R9AQ9ULJ8 1098 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 SYNPO2Q9UMS6 1093 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 CTDP1Q9Y5B0 961 aaPredicted RBP13.97□□□□□ -0.17
CLRN1-205ENST00000472224 RBM8AQ9Y5S9 174 aaKnown RBP13.97□□□□□ -0.17
CLRN1-205ENST00000472224 TTC28Q96AY4 2481 aa13.97□□□□□ -0.17
CLRN1-205ENST00000472224 ZNFX1Q9P2E3 1918 aaKnown RBP13.96□□□□□ -0.17
CLRN1-205ENST00000472224 BMP3P12645 472 aa13.96□□□□□ -0.17
CLRN1-205ENST00000472224 MCCP23508 829 aa13.96□□□□□ -0.17
CLRN1-205ENST00000472224 SLC4A3P48751 1232 aa13.96□□□□□ -0.17
CLRN1-205ENST00000472224 TRDNQ13061 729 aa13.96□□□□□ -0.17
CLRN1-205ENST00000472224 LRRC26Q2I0M4 334 aa13.96□□□□□ -0.17
CLRN1-205ENST00000472224 GPR142Q7Z601 462 aa13.96□□□□□ -0.17
CLRN1-205ENST00000472224 IQCA1Q86XH1 822 aa13.96□□□□□ -0.17
CLRN1-205ENST00000472224 MB21D1Q8N884 522 aa13.96□□□□□ -0.17
CLRN1-205ENST00000472224 SPATC1LQ9H0A9 340 aa13.96□□□□□ -0.17
CLRN1-205ENST00000472224 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.17
CLRN1-205ENST00000472224 HMX1Q9NP08 348 aaPredicted RBP13.96□□□□□ -0.17
CLRN1-205ENST00000472224 FRMPD2Q68DX3 1309 aaPredicted RBP13.95□□□□□ -0.18
CLRN1-205ENST00000472224 CYP21A2P08686 494 aa13.95□□□□□ -0.18
CLRN1-205ENST00000472224 TOP1P11387 765 aaKnown RBP13.95□□□□□ -0.18
CLRN1-205ENST00000472224 ZNF697Q5TEC3 545 aa13.95□□□□□ -0.18
CLRN1-205ENST00000472224 KCTD1Q719H9 257 aa13.95□□□□□ -0.18
CLRN1-205ENST00000472224 PLEKHH3Q7Z736 793 aa13.95□□□□□ -0.18
CLRN1-205ENST00000472224 RALYLQ86SE5 291 aaKnown RBP13.95□□□□□ -0.18
CLRN1-205ENST00000472224 NCAPG2Q86XI2 1143 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms