RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 RUFY2Q8WXA3 655 aa17.81■□□□□ 0.44
CALD1-215ENST00000472096 MOV10L1Q9BXT6 1211 aaKnown RBP17.81■□□□□ 0.44
CALD1-215ENST00000472096 CWC22Q9HCG8 908 aaKnown RBP17.81■□□□□ 0.44
CALD1-215ENST00000472096 BIN2Q9UBW5 565 aaPredicted RBP17.81■□□□□ 0.44
CALD1-215ENST00000472096 ADAMTS5Q9UNA0 930 aa17.81■□□□□ 0.44
CALD1-215ENST00000472096 STX8Q9UNK0 236 aa17.81■□□□□ 0.44
CALD1-215ENST00000472096 ZNF213O14771 459 aa17.8■□□□□ 0.44
CALD1-215ENST00000472096 NEFLP07196 543 aa17.8■□□□□ 0.44
CALD1-215ENST00000472096 NOVP48745 357 aa17.8■□□□□ 0.44
CALD1-215ENST00000472096 WDR78Q5VTH9 848 aa17.8■□□□□ 0.44
CALD1-215ENST00000472096 SHCBP1Q8NEM2 672 aa17.8■□□□□ 0.44
CALD1-215ENST00000472096 USP6NLQ92738 828 aa17.8■□□□□ 0.44
CALD1-215ENST00000472096 CCDC136Q96JN2 1154 aa17.8■□□□□ 0.44
CALD1-215ENST00000472096 SLF1Q9BQI6 1058 aa17.8■□□□□ 0.44
CALD1-215ENST00000472096 RNF41Q9H4P4 317 aaPredicted RBP17.8■□□□□ 0.44
CALD1-215ENST00000472096 VWA5AO00534 786 aa17.79■□□□□ 0.44
CALD1-215ENST00000472096 GABBR2O75899 941 aa17.79■□□□□ 0.44
CALD1-215ENST00000472096 HMGCRP04035 888 aa17.79■□□□□ 0.44
CALD1-215ENST00000472096 CYP2B6P20813 491 aa17.79■□□□□ 0.44
CALD1-215ENST00000472096 TMEM132BQ14DG7 1078 aa17.79■□□□□ 0.44
CALD1-215ENST00000472096 SLFN13Q68D06 897 aa17.79■□□□□ 0.44
CALD1-215ENST00000472096 REPS2Q8NFH8 660 aa17.79■□□□□ 0.44
CALD1-215ENST00000472096 TRIB2Q92519 343 aa17.79■□□□□ 0.44
CALD1-215ENST00000472096 APBA2Q99767 749 aa17.79■□□□□ 0.44
CALD1-215ENST00000472096 CTNNA3Q9UI47 895 aa17.79■□□□□ 0.44
CALD1-215ENST00000472096 TNRC18O15417 2968 aaPredicted RBP17.79■□□□□ 0.44
CALD1-215ENST00000472096 SGSM2O43147 1006 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 XRCC5P13010 732 aaKnown RBP17.78■□□□□ 0.44
CALD1-215ENST00000472096 CCL5P13501 91 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 ERCC3P19447 782 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 PTPREP23469 700 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 RGS2P41220 211 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 GRB14Q14449 540 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 PLS1Q14651 629 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 IMMTQ16891 758 aaKnown RBP17.78■□□□□ 0.44
CALD1-215ENST00000472096 FBXO22Q8NEZ5 403 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 NKX2-3Q8TAU0 364 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 GMCL1Q96IK5 515 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 TCP11L1Q9NUJ3 509 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 IVNS1ABPQ9Y6Y0 642 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 PDE4DIPQ5VU43 2346 aa17.78■□□□□ 0.44
CALD1-215ENST00000472096 SLC15A5A6NIM6 579 aa17.77■□□□□ 0.44
CALD1-215ENST00000472096 BMP3P12645 472 aa17.77■□□□□ 0.44
CALD1-215ENST00000472096 EN2P19622 333 aaPredicted RBP17.77■□□□□ 0.44
CALD1-215ENST00000472096 MAP2K5Q13163 448 aa17.77■□□□□ 0.44
CALD1-215ENST00000472096 RASGRP2Q7LDG7 609 aa17.77■□□□□ 0.44
CALD1-215ENST00000472096 ESR2Q92731 530 aa17.77■□□□□ 0.44
CALD1-215ENST00000472096 UNC93B1Q9H1C4 597 aa17.77■□□□□ 0.44
CALD1-215ENST00000472096 FEM1BQ9UK73 627 aa17.77■□□□□ 0.44
CALD1-215ENST00000472096 ZNF214Q9UL59 606 aaPredicted RBP17.77■□□□□ 0.44
CALD1-215ENST00000472096 ZKSCAN1P17029 563 aaPredicted RBP17.76■□□□□ 0.43
CALD1-215ENST00000472096 NT5C2P49902 561 aa17.76■□□□□ 0.43
CALD1-215ENST00000472096 PTH1RQ03431 593 aa17.76■□□□□ 0.43
CALD1-215ENST00000472096 BMP2KLQ5H9B9 411 aa17.76■□□□□ 0.43
CALD1-215ENST00000472096 NCAPG2Q86XI2 1143 aa17.76■□□□□ 0.43
CALD1-215ENST00000472096 RIOX2Q8IUF8 465 aa17.76■□□□□ 0.43
CALD1-215ENST00000472096 PRPF38AQ8NAV1 312 aaKnown RBP17.76■□□□□ 0.43
CALD1-215ENST00000472096 RNF208Q9H0X6 261 aa17.76■□□□□ 0.43
CALD1-215ENST00000472096 MROH8Q9H579 483 aa17.76■□□□□ 0.43
CALD1-215ENST00000472096 MKI67P46013 3256 aaKnown RBP17.76■□□□□ 0.43
CALD1-215ENST00000472096 MYH6P13533 1939 aa17.75■□□□□ 0.43
CALD1-215ENST00000472096 B4E1Z4 1266 aa17.75■□□□□ 0.43
CALD1-215ENST00000472096 SLC25A27O95847 323 aa17.75■□□□□ 0.43
CALD1-215ENST00000472096 TOP1P11387 765 aaKnown RBP17.75■□□□□ 0.43
CALD1-215ENST00000472096 MCCP23508 829 aa17.75■□□□□ 0.43
CALD1-215ENST00000472096 SLC1A4P43007 532 aa17.75■□□□□ 0.43
CALD1-215ENST00000472096 TRIM32Q13049 653 aa17.75■□□□□ 0.43
CALD1-215ENST00000472096 RCSD1Q6JBY9 416 aa17.75■□□□□ 0.43
CALD1-215ENST00000472096 TRMT44Q8IYL2 757 aaKnown RBP17.75■□□□□ 0.43
CALD1-215ENST00000472096 KIFC2Q96AC6 838 aa17.75■□□□□ 0.43
CALD1-215ENST00000472096 SHISA4Q96DD7 197 aa17.75■□□□□ 0.43
CALD1-215ENST00000472096 TMEM47Q9BQJ4 181 aa17.75■□□□□ 0.43
CALD1-215ENST00000472096 ISY1Q9ULR0 285 aaKnown RBP17.75■□□□□ 0.43
CALD1-215ENST00000472096 SMCHD1A6NHR9 2005 aa17.75■□□□□ 0.43
CALD1-215ENST00000472096 TMEM232C9JQI7 657 aa17.74■□□□□ 0.43
CALD1-215ENST00000472096 KDM4AO75164 1064 aa17.74■□□□□ 0.43
CALD1-215ENST00000472096 GJB1P08034 283 aa17.74■□□□□ 0.43
CALD1-215ENST00000472096 HOXC6P09630 235 aa17.74■□□□□ 0.43
CALD1-215ENST00000472096 ADORA2AP29274 412 aa17.74■□□□□ 0.43
CALD1-215ENST00000472096 COPB2P35606 906 aa17.74■□□□□ 0.43
CALD1-215ENST00000472096 STAT3P40763 770 aa17.74■□□□□ 0.43
CALD1-215ENST00000472096 STAT2P52630 851 aa17.74■□□□□ 0.43
CALD1-215ENST00000472096 CCL14Q16627 93 aa17.74■□□□□ 0.43
CALD1-215ENST00000472096 CHMP4CQ96CF2 233 aa17.74■□□□□ 0.43
CALD1-215ENST00000472096 SLC38A10Q9HBR0 1119 aa17.74■□□□□ 0.43
CALD1-215ENST00000472096 PAK6Q9NQU5 681 aaPredicted RBP17.74■□□□□ 0.43
CALD1-215ENST00000472096 STRNO43815 780 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 PPP1R37O75864 691 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
CALD1-215ENST00000472096 GJA8P48165 433 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 MAP3K21Q5TCX8 1036 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 KCTD1Q719H9 257 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 FAM160B2Q86V87 743 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 ABRAQ8N0Z2 381 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 DCAF4Q8WV16 495 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 TTC14Q96N46 770 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 ZKSCAN3Q9BRR0 538 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 TEX13BQ9BXU2 312 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 KRT23Q9C075 422 aa17.73■□□□□ 0.43
CALD1-215ENST00000472096 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms